Literature DB >> 3792297

New ideas about enzyme reactions.

M J Dewar.   

Abstract

Since a proper substrate of an enzyme fits its active site closely, adsorption in the active site can occur only if all water is excluded from between them. Any subsequent reaction therefore takes place in the absence of solvent, i.e. as it would in the gas phase. The specificity and high rates of enzyme reactions can be explained immediately in terms of this analogy. Past experimental studies of enzyme mechanisms, based on analogy with reactions in solution, need to be reevaluated. Interpretation of enzyme reactions requires information concerning gas phase chemistry, which is usually lacking. The role of theoretical calculations in this connection is pointed out.

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Year:  1986        PMID: 3792297     DOI: 10.1159/000469274

Source DB:  PubMed          Journal:  Enzyme        ISSN: 0013-9432


  8 in total

1.  Determining the catalytic role of remote substrate binding interactions in ketosteroid isomerase.

Authors:  Jason P Schwans; Daniel A Kraut; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-12       Impact factor: 11.205

2.  Ketosteroid isomerase provides further support for the idea that enzymes work by electrostatic preorganization.

Authors:  Shina C L Kamerlin; Pankaz K Sharma; Zhen T Chu; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-11       Impact factor: 11.205

3.  Enzymes work by solvation substitution rather than by desolvation.

Authors:  A Warshel; J Aqvist; S Creighton
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

4.  Direct demonstration of the isomerization component of the monoterpene cyclase reaction using a cyclopropylcarbinyl pyrophosphate substrate analog.

Authors:  C J Wheeler; R B Croteau
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

5.  Mechanistic insights into water activation in SAM hydroxide adenosyltransferase (duf-62).

Authors:  Hai Deng; Stephen A McMahon; Alessandra S Eustáquio; Bradley S Moore; James H Naismith; David O'Hagan
Journal:  Chembiochem       Date:  2009-10-12       Impact factor: 3.164

6.  On catalytic preorganization in oxyanion holes: highlighting the problems with the gas-phase modeling of oxyanion holes and illustrating the need for complete enzyme models.

Authors:  Shina C L Kamerlin; Zhen T Chu; A Warshel
Journal:  J Org Chem       Date:  2010-10-01       Impact factor: 4.354

7.  Dissociation of proton-bound complexes and proton affinity of benzamides.

Authors:  H F Grützmacher; A Caltapanides
Journal:  J Am Soc Mass Spectrom       Date:  1994-09       Impact factor: 3.109

8.  Testing electrostatic complementarity in enzyme catalysis: hydrogen bonding in the ketosteroid isomerase oxyanion hole.

Authors:  Daniel A Kraut; Paul A Sigala; Brandon Pybus; Corey W Liu; Dagmar Ringe; Gregory A Petsko; Daniel Herschlag
Journal:  PLoS Biol       Date:  2006-03-28       Impact factor: 8.029

  8 in total

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