Literature DB >> 374993

Nucleotide sequence of the recognition site of the B-specific restriction modification system in E. coli.

R Sommer, H Schaller.   

Abstract

Two sB mutations in the genome of bacteriophage fd were located by sequence analysis in the fd sequence at positions 971 and 6341. Base changes at or close to these positions in phage M13 and in phage fl am 124 also correlate with a loss of sensitivity to B restriction. From the sequence homology between the sequences at the two sB sites the recognition signal for the E. coli B restriction/modification enzzyme is predicted to be: 5' TGA---8N---TGCT 3' 3' ACT---8N---ACGA 5'.

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Year:  1979        PMID： 374993     DOI： 10.1007/bf00271504

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN： 0026-8925


  16 in total

1.  Endonuclease R-EcoRII restriction of bacteriophage f1 DNA in vitro: ordering of genes V and VII, location of an RNA promotor for gene VIII.

Authors:  G F Vovis; K Horiuchi; N D Zinder
Journal:  J Virol       Date:  1975-09       Impact factor: 5.103

2.  The genome of simian virus 40.

Authors:  V B Reddy; B Thimmappaya; R Dhar; K N Subramanian; B S Zain; J Pan; P K Ghosh; M L Celma; S M Weissman
Journal:  Science       Date:  1978-05-05       Impact factor: 47.728

3.  Complete nucleotide sequence of SV40 DNA.

Authors:  W Fiers; R Contreras; G Haegemann; R Rogiers; A Van de Voorde; H Van Heuverswyn; J Van Herreweghe; G Volckaert; M Ysebaert
Journal:  Nature       Date:  1978-05-11       Impact factor: 49.962

4.  Nucleotide sequence of bacteriophage phi X174 DNA.

Authors:  F Sanger; G M Air; B G Barrell; N L Brown; A R Coulson; C A Fiddes; C A Hutchison; P M Slocombe; M Smith
Journal:  Nature       Date:  1977-02-24       Impact factor: 49.962

5.  Structure of the orgin of DNA replication of bacteriophage fd.

Authors:  C P Gray; R Sommer; C Polke; E Beck; H Schaller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

6.  Methylated oligonucleotides derived from bacteriophage fd RF-DNA modified in vitro by E. coli B modification methylase.

Authors:  H van Ormondt; J A Lautenberger; S Linn; A de Waard
Journal:  FEBS Lett       Date:  1973-07-01       Impact factor: 4.124

7.  Host specificity of DNA produced by Escherichia coli. XV. The role of nucleotide methylation in in vitro B-specific modification.

Authors:  U Kühnlein; W Arber
Journal:  J Mol Biol       Date:  1972-01-14       Impact factor: 5.469

8.  The genetic map of the filamentous bacteriophage f1.

Authors:  L B Lyons; N D Zinder
Journal:  Virology       Date:  1972-07       Impact factor: 3.616

9.  Determination of a nucleotide sequence in bacteriophage f1 DNA by primed synthesis with DNA polymerase.

Authors:  F Sanger; J E Donelson; A R Coulson; H Kössel; D Fischer
Journal:  J Mol Biol       Date:  1974-12-05       Impact factor: 5.469

10.  Location and nucleotide sequence of the site on SV40 DNA methylated by the ECO B modification methylase.

Authors:  A Dugaiczyk; M Kimball; S Linn; H M Goodman
Journal:  Biochem Biophys Res Commun       Date:  1974-12-23       Impact factor: 3.575
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  14 in total

1.  A prediction of the amino acids and structures involved in DNA recognition by type I DNA restriction and modification enzymes.

Authors:  S S Sturrock; D T Dryden
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

2.  Crystal structure of a novel domain of the motor subunit of the Type I restriction enzyme EcoR124 involved in complex assembly and DNA binding.

Authors:  Pavel Grinkevich; Dhiraj Sinha; Iuliia Iermak; Alena Guzanova; Marie Weiserova; Jost Ludwig; Jeroen R Mesters; Rüdiger H Ettrich
Journal:  J Biol Chem       Date:  2018-07-27       Impact factor: 5.157

3.  The nucleotide sequence recognised by the Escherichia coli D type I restriction and modification enzyme.

Authors:  V Nagaraja; M Stieger; C Nager; S M Hadi; T A Bickle
Journal:  Nucleic Acids Res       Date:  1985-01-25       Impact factor: 16.971

Review 4.  Biology of DNA restriction.

Authors:  T A Bickle; D H Krüger
Journal:  Microbiol Rev       Date:  1993-06

Review 5.  Bacteriophage T3 and bacteriophage T7 virus-host cell interactions.

Authors:  D H Krüger; C Schroeder
Journal:  Microbiol Rev       Date:  1981-03

6.  The hsd (host specificity) genes of E. coli K 12.

Authors:  B Sain; N E Murray
Journal:  Mol Gen Genet       Date:  1980

Review 7.  Bacteriophage survival: multiple mechanisms for avoiding the deoxyribonucleic acid restriction systems of their hosts.

Authors:  D H Krüger; T A Bickle
Journal:  Microbiol Rev       Date:  1983-09

8.  New restriction enzymes discovered from Escherichia coli clinical strains using a plasmid transformation method.

Authors:  Julie K A Kasarjian; Masatake Iida; Junichi Ryu
Journal:  Nucleic Acids Res       Date:  2003-03-01       Impact factor: 16.971

9.  The nucleotide recognized by the Escherichia coli A restriction and modification enzyme.

Authors:  M Kröger; G Hobom
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

10.  Restriction alleviation by bacteriophages lambda and lambda reverse.

Authors:  P Toothman
Journal:  J Virol       Date:  1981-05       Impact factor: 5.103
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