Literature DB >> 3749334

The complete nucleotide sequence of the bacteriocinogenic plasmid CloDF13.

H J Nijkamp, R de Lang, A R Stuitje, P J van den Elzen, E Veltkamp, A J van Putten.   

Abstract

The complete nucleotide sequence of the bacteriocinogenic plasmid CloDF13 has been determined. The plasmid consists of 9957 base pairs (molecular weight 6.64 X 10(6] with a GC content of 54.4%. At this moment 16 identified biological functions can be assigned to the primary structure of the CloDF13 DNA. The functions include those of eight protein encoding genes, two untranslated RNA species, and six DNA sites. We discuss these functions in relation to the structure of CloDF13 DNA. For convenience we have divided the CloDF13 genome into five defined regions: region I (origin of vegetative replication, priming and control of replication, type I incompatibility), region II (cloacin DF13, cloacin immunity, cloacin release, cloacin operon control), region III (double-stranded DNA-phage interaction, type II incompatibility, multimer resolution), region IV (inhibition of male specific RNA phages and transfer of Flac), and region V (mobility proteins, basis of mobility).

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Year:  1986        PMID: 3749334     DOI: 10.1016/0147-619x(86)90072-7

Source DB:  PubMed          Journal:  Plasmid        ISSN: 0147-619X            Impact factor:   3.466


  12 in total

1.  Protein evolution with an expanded genetic code.

Authors:  Chang C Liu; Antha V Mack; Meng-Lin Tsao; Jeremy H Mills; Hyun Soo Lee; Hyeryun Choe; Michael Farzan; Peter G Schultz; Vaughn V Smider
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-11       Impact factor: 11.205

Review 2.  Interaction of mitochondrial porin with cytosolic proteins.

Authors:  D Brdiczka
Journal:  Experientia       Date:  1990-02-15

3.  Agrobacterium tumefaciens oncogenic suppressors inhibit T-DNA and VirE2 protein substrate binding to the VirD4 coupling protein.

Authors:  Eric Cascales; Krishnamohan Atmakuri; Zhenying Liu; Andrew N Binns; Peter J Christie
Journal:  Mol Microbiol       Date:  2005-10       Impact factor: 3.501

4.  Lateral transfer of rfb genes: a mobilizable ColE1-type plasmid carries the rfbO:54 (O:54 antigen biosynthesis) gene cluster from Salmonella enterica serovar Borreze.

Authors:  W J Keenleyside; C Whitfield
Journal:  J Bacteriol       Date:  1995-09       Impact factor: 3.490

5.  Chimeric nature of two plasmids of Hafnia alvei encoding the bacteriocins alveicins A and B.

Authors:  John E Wertz; Margaret A Riley
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

6.  The complete nucleotide sequence of the colicinogenic plasmid ColA. High extent of homology with ColE1.

Authors:  J Morlon; M Chartier; M Bidaud; C Lazdunski
Journal:  Mol Gen Genet       Date:  1988-02

Review 7.  Replication of plasmids in gram-negative bacteria.

Authors:  U Kües; U Stahl
Journal:  Microbiol Rev       Date:  1989-12

8.  Genetic selection designed to stabilize proteins uncovers a chaperone called Spy.

Authors:  Shu Quan; Philipp Koldewey; Tim Tapley; Nadine Kirsch; Karen M Ruane; Jennifer Pfizenmaier; Rong Shi; Stephan Hofmann; Linda Foit; Guoping Ren; Ursula Jakob; Zhaohui Xu; Miroslaw Cygler; James C A Bardwell
Journal:  Nat Struct Mol Biol       Date:  2011-02-13       Impact factor: 15.369

9.  A simple method for displaying recalcitrant proteins on the surface of bacteriophage lambda.

Authors:  Christine N Zanghi; Heather A Lankes; Birgit Bradel-Tretheway; Jessica Wegman; Stephen Dewhurst
Journal:  Nucleic Acids Res       Date:  2005-10-13       Impact factor: 16.971

Review 10.  Colicin biology.

Authors:  Eric Cascales; Susan K Buchanan; Denis Duché; Colin Kleanthous; Roland Lloubès; Kathleen Postle; Margaret Riley; Stephen Slatin; Danièle Cavard
Journal:  Microbiol Mol Biol Rev       Date:  2007-03       Impact factor: 11.056

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