Literature DB >> 3741834

pH dependence of kinetic parameters for oxalacetate decarboxylation and pyruvate reduction reactions catalyzed by malic enzyme.

S H Park, B G Harris, P F Cook.   

Abstract

Both chicken liver NADP-malic enzyme and Ascaris suum NAD-malic enzyme catalyze the metal-dependent decarboxylation of oxalacetate. Both enzymes catalyze the reaction either in the presence or in the absence of dinucleotide. The presence of dinucleotide increases the affinity of oxalacetate for the chicken liver NADP-malic enzyme, but this information could not be obtained in the case of A. suum NAD-malic enzyme because of the low affinity of free enzyme for NAD. The kinetic mechanism for oxalacetate decarboxylation by the chicken liver NADP-malic enzyme is equilibrium ordered at pH values below 5.0 with NADP adding to enzyme first. The Ki for NADP increases by a factor of 10 per pH unit below pH 5.0. An enzyme residue is required protonated for oxalacetate decarboxylation (by both enzymes) and pyruvate reduction (by the NAD-malic enzyme), but the beta-carboxyl of oxalacetate must be unprotonated for reaction (by both enzymes). The pK of the enzyme residue of the chicken liver NADP-malic enzyme decreases from a value of 6.4 in the absence of NADP to about 5.5 with Mg2+ and 4.8 with Mn2+ in the presence of NADP. The pK value of the enzyme residue required protonated for either oxalacetate decarboxylation or pyruvate reduction for the A. suum NAD-malic enzyme is about 5.5-6.0. Although oxalacetate binds equally well to protonated and unprotonated forms of the NADP-enzyme, the NAD-enzyme requires that oxalacetate or pyruvate selectively bind to the protonated form of the enzyme. Both enzymes prefer Mn2+ over Mg2+ for oxalacetate decarboxylation.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1986        PMID: 3741834     DOI: 10.1021/bi00361a004

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Malic enzymes of higher plants: characteristics, regulation, and physiological function.

Authors:  R T Wedding
Journal:  Plant Physiol       Date:  1989-06       Impact factor: 8.340

2.  Mechanism of citrate metabolism by an oxaloacetate decarboxylase-deficient mutant of Lactococcus lactis IL1403.

Authors:  Agata M Pudlik; Juke S Lolkema
Journal:  J Bacteriol       Date:  2011-06-10       Impact factor: 3.490

3.  Characterization of an archaeal malic enzyme from the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Wakao Fukuda; Yulia Sari Ismail; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Archaea       Date:  2005-05       Impact factor: 3.273

4.  Role of the divalent metal ion in the NAD:malic enzyme reaction: an ESEEM determination of the ground state conformation of malate in the E:Mn:malate complex.

Authors:  P A Tipton; T P Quinn; J Peisach; P F Cook
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

5.  Kinetic mechanism of NADP-malic enzyme from maize leaves.

Authors:  C P Spampinato; C S Andreo
Journal:  Photosynth Res       Date:  1995-01       Impact factor: 3.573

6.  Structure and function of PA4872 from Pseudomonas aeruginosa, a novel class of oxaloacetate decarboxylase from the PEP mutase/isocitrate lyase superfamily.

Authors:  Buvaneswari C Narayanan; Weiling Niu; Ying Han; Jiwen Zou; Patrick S Mariano; Debra Dunaway-Mariano; Osnat Herzberg
Journal:  Biochemistry       Date:  2007-12-15       Impact factor: 3.162

  6 in total

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