Literature DB >> 3663684

Conformational changes in concanavalin A associated with demetallization and alpha-methylmannose binding studied by Fourier transform infrared spectroscopy.

J Alvarez1, P I Haris, D C Lee, D Chapman.   

Abstract

Infrared spectra of concanavalin A have been obtained both in the absence and in the presence of the metal ions, Mn2+ and Ca2+, and the saccharide, alpha-methylmannose. Second derivative calculations have been used to determine the frequencies of the different amide I and II components. In the demetallized protein dissolved in H2O buffer, absorptions in the amide I, II and III regions at 1695 and 1634, 1532 and 1237 cm-1, respectively, are assigned to beta-structure, while absorptions at 1563 and both 1318 and 1343 cm-1 are assigned to turns and bends. After deuterium exchange, the residual amide II maximum in the difference spectrum shifts from 1538 to 1563 cm-1, indicating that exchange is faster in the beta-structure than in the turns. In the presence of Mn2+ and Ca2+, the amide II band component at 1532 cm-1 shifts 4-6 cm-1 to higher wavenumbers, and the amide I band component at 1634 shifts 1 cm-1 in the same direction, both in H2O and 2H2O buffers, suggesting changes in the hydrogen-bonding network of a large portion of the protein, particularly in the beta-sheet regions. The addition of alpha-methylmannose increases the magnitude of exchange from 55% to above 90%. Comparison with existing X-ray crystallographic data has been made, and the usefulness of FT-IR to complement this technique is discussed.

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Year:  1987        PMID: 3663684     DOI: 10.1016/0167-4838(87)90204-4

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  3 in total

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Authors:  P S Sheldon; J N Keen; D J Bowles
Journal:  Biochem J       Date:  1998-02-15       Impact factor: 3.857

2.  Conformational changes in alamethicin associated with substitution of its alpha-methylalanines with leucines: a FTIR spectroscopic analysis and correlation with channel kinetics.

Authors:  Parvez I Haris; Gérard Molle; Hervé Duclohier
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

3.  The Next Generation of IR Spectroscopy: EC-QCL-Based Mid-IR Transmission Spectroscopy of Proteins with Balanced Detection.

Authors:  Christopher K Akhgar; Georg Ramer; Mateusz Żbik; Artur Trajnerowicz; Jarosław Pawluczyk; Andreas Schwaighofer; Bernhard Lendl
Journal:  Anal Chem       Date:  2020-07-13       Impact factor: 6.986

  3 in total

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