Literature DB >> 3656424

Lysis gene of bacteriophage MS2 is activated by translation termination at the overlapping coat gene.

B Berkhout1, B F Schmidt, A van Strien, J van Boom, J van Westrenen, J van Duin.   

Abstract

The 3' boundary of the coat gene of the RNA bacteriophage MS2 lies 46 nucleotides downstream from the beginning of the lysis (L) cistron. The translation of both reading frames is coupled; the synthesis of the lysis protein does not occur unless translation of the overlapping coat gene takes place. In the preceding paper we showed that de novo initiation at the L gene is prevented by a hairpin structure that sequesters the ribosomal binding site. Here we examine how translation of the coat gene activates the L gene start site. The experiments show that the movement of ribosomes through the hairpin is in itself not sufficient to expose the lysis gene. Rather, the endpoint of translation is important. Termination at the natural end of the coat gene triggers the lysis response, but further downstream terminations do not. Activation of the L gene is suppressed when the stability of the lysis initiator hairpin is increased by mutations that create additional base-pairs. We assume that the ribosome, terminating at the coat reading frame, covers part of the lysis hairpin, thereby destabilizing the secondary structure. This may be sufficient to promote the binding of a vacant ribosome to the L gene start. Alternatively, the terminated but not yet released ribosome may reach the L gene start by random lateral movements along the mRNA and reinitiate there. The present findings are also discussed in relation to an earlier proposal for L gene activation.

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Year:  1987        PMID: 3656424     DOI: 10.1016/0022-2836(87)90180-x

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  33 in total

1.  Role of ribosome recycling factor (RRF) in translational coupling.

Authors:  Y Inokuchi; A Hirashima; Y Sekine; L Janosi; A Kaji
Journal:  EMBO J       Date:  2000-07-17       Impact factor: 11.598

2.  Translational control by delayed RNA folding: identification of the kinetic trap.

Authors:  D van Meerten; G Girard; J van Duin
Journal:  RNA       Date:  2001-03       Impact factor: 4.942

Review 3.  Bacteriophage lysis: mechanism and regulation.

Authors:  R Young
Journal:  Microbiol Rev       Date:  1992-09

4.  Pseudoknot-dependent translational coupling in repBA genes of the IncB plasmid pMU720 involves reinitiation.

Authors:  J Praszkier; A J Pittard
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

5.  Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis.

Authors:  M H de Smit; J van Duin
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

6.  Translational reinitiation in the presence and absence of a Shine and Dalgarno sequence.

Authors:  R A Spanjaard; J van Duin
Journal:  Nucleic Acids Res       Date:  1989-07-25       Impact factor: 16.971

7.  Genomewide patterns of substitution in adaptively evolving populations of the RNA bacteriophage MS2.

Authors:  Andrea J Betancourt
Journal:  Genetics       Date:  2009-02-02       Impact factor: 4.562

Review 8.  Programmed translational frameshifting.

Authors:  P J Farabaugh
Journal:  Microbiol Rev       Date:  1996-03

9.  Long-range translational coupling in single-stranded RNA bacteriophages: an evolutionary analysis.

Authors:  N Licis; J van Duin; Z Balklava; V Berzins
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

10.  Translational efficiency of phi X174 lysis gene E is unaffected by upstream translation of the overlapping gene D reading frame.

Authors:  U Bläsi; K Nam; W Lubitz; R Young
Journal:  J Bacteriol       Date:  1990-10       Impact factor: 3.490

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