Literature DB >> 3628002

An inspection of the domain between putative TATA box and translation start site in 79 plant genes.

C P Joshi.   

Abstract

Over 75 published genomic DNA sequences from several higher plants have been collected and flanking regions of the leader sequences have been analysed. In a majority of the plants, the first AUG codon on processed mRNA acted as a translation initiation site. The consensus sequence for the context was TAAACAATGGCT (on plus strand of DNA). This differed from the earlier suggestion for eukaryotic mRNAs based mainly on data from animals. Leader sequences were generally 40-80 nucleotides in length and were A+T rich. Adenine was present in a majority of the cases at the transcription start site which was flanked by pyrimidine bases. The putative TATA box was present 32 +/- 7 nucleotides upstream from the transcription initiation site. The consensus sequence for TATA box and surrounding region was TCACTATATATAG.

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Year:  1987        PMID： 3628002      PMCID： PMC306128          DOI： 10.1093/nar/15.16.6643

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  58 in total

1.  Structure and expression of a pea nuclear gene encoding a chlorophyll a/b-binding polypeptide.

Authors:  A R Cashmore
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

2.  Complete nucleotide sequence of a French bean storage protein gene: Phaseolin.

Authors:  J L Slightom; S M Sun; T C Hall
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

3.  Structure and expression of three light-harvesting chlorophyll a/b-binding protein genes in Arabidopsis thaliana.

Authors:  L S Leutwiler; E M Meyerowitz; E M Tobin
Journal:  Nucleic Acids Res       Date:  1986-05-27       Impact factor: 16.971

4.  Complete nucleotide sequence of a soybean actin gene.

Authors:  D M Shah; R C Hightower; R B Meagher
Journal:  Proc Natl Acad Sci U S A       Date:  1982-02       Impact factor: 11.205

5.  Primary structure of the soybean nodulin-35 gene encoding uricase II localized in the peroxisomes of uninfected cells of nodules.

Authors:  T Nguyen; M Zelechowska; V Foster; H Bergmann; D P Verma
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

6.  Molecular cloning and DNA sequence of the Arabidopsis thaliana alcohol dehydrogenase gene.

Authors:  C Chang; E M Meyerowitz
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

7.  cA lectin gene insertion has the structural features of a transposable element.

Authors:  L O Vodkin; P R Rhodes; R B Goldberg
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

8.  The legumin gene family: structure of a B type gene of Vicia faba and a possible legumin gene specific regulatory element.

Authors:  H Bäumlein; U Wobus; J Pustell; F C Kafatos
Journal:  Nucleic Acids Res       Date:  1986-03-25       Impact factor: 16.971

9.  Expression dynamics of the pea rbcS multigene family and organ distribution of the transcripts.

Authors:  Robert Fluhr; Phyllis Moses; Giorgio Morelli; Gloria Coruzzi; Nam-Hai Chua
Journal:  EMBO J       Date:  1986-09       Impact factor: 11.598

10.  Selection of AUG initiation codons differs in plants and animals.

Authors:  H A Lütcke; K C Chow; F S Mickel; K A Moss; H F Kern; G A Scheele
Journal:  EMBO J       Date:  1987-01       Impact factor: 11.598
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  359 in total

1.  Cloning and expression of a hexose transporter gene expressed during the ripening of grape berry.

Authors:  L Fillion; A Ageorges; S Picaud; P Coutos-Thévenot; R Lemoine; C Romieu; S Delrot
Journal:  Plant Physiol       Date:  1999-08       Impact factor: 8.340

2.  Effect of pectin methylesterase gene expression on pea root development.

Authors:  F Wen; Y Zhu; M C Hawes
Journal:  Plant Cell       Date:  1999-06       Impact factor: 11.277

3.  Negative effect of the 5'-untranslated leader sequence on Ac transposon promoter expression.

Authors:  K C Scortecci; R Raina; N V Fedoroff; M A Van Sluys
Journal:  Plant Mol Biol       Date:  1999-08       Impact factor: 4.076

4.  Nectarin I is a novel, soluble germin-like protein expressed in the nectar of Nicotiana sp.

Authors:  C Carter; R A Graham; R W Thornburg
Journal:  Plant Mol Biol       Date:  1999-09       Impact factor: 4.076

5.  Isolation of rapeseed genes expressed early and specifically during development of the male gametophyte.

Authors:  A Fourgoux-Nicol; J Drouaud; N Haouazine; G Pelletier; P Guerche
Journal:  Plant Mol Biol       Date:  1999-07       Impact factor: 4.076

6.  Identification and characterization of a heat-induced isoform of aldolase in oat chloroplast.

Authors:  R Michelis; S Gepstein
Journal:  Plant Mol Biol       Date:  2000-11       Impact factor: 4.076

7.  Temporal and tissue-specific expression of the tobacco ntf4 MAP kinase.

Authors:  V Voronin; A Touraev; H Kieft; A A van Lammeren; E Heberle-Bors; C Wilson
Journal:  Plant Mol Biol       Date:  2001-04       Impact factor: 4.076

8.  LEFPS1, a tomato farnesyl pyrophosphate gene highly expressed during early fruit development.

Authors:  J Gaffe; J P Bru; M Causse; A Vidal; L Stamitti-Bert; J P Carde; P Gallusci
Journal:  Plant Physiol       Date:  2000-08       Impact factor: 8.340

9.  Promoter sequences from two different Brassica napus tapetal oleosin-like genes direct tapetal expression of beta-glucuronidase in transgenic Brassica plants.

Authors:  H P Hong; J H Ross; J L Gerster; S Rigas; R S Datla; P Hatzopoulos; G Scoles; W Keller; D J Murphy; L S Robert
Journal:  Plant Mol Biol       Date:  1997-06       Impact factor: 4.076

10.  Cloning and analysis of a functional promoter of fungal immunomodulatory protein from Flammulina velutipes.

Authors:  Wei-Ran Cong; Yan Liu; Qi-Zhang Li; Xuan-Wei Zhou
Journal:  Mol Biol Rep       Date:  2014-03-01       Impact factor: 2.316
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