Literature DB >> 3627775

Information theory and the genetic code.

A Figureau.   

Abstract

The genetic code, which directs the protein biosynthesis, is an information system. Although all its details are not known at present, its essential characteristics are elucidated, as well for the replication or transcription as for the translation of the genetic message. A coherent picture now appears, which reveals the existence of an universal structure, the most fundamental features of which seem to obey some logic. A systematic approach has been devised, which aims to their integration in a theorectical scheme: many features of the code table can thus be interpreted as resulting from a unique principle of best resistance against the effects of mutations. Any group of triplets or amino-acids can be considered along this line. It is more difficult however, to analyse the coexistence of two (or more) different groups. In this work, we propose to extend our optimization principle into a more general one, which includes the notion of information as defined by Shannon. We explore some consequences of this new principle in the most simple models that one can build for the origin and evolution of the genetic code.

Mesh:

Year:  1987        PMID: 3627775     DOI: 10.1007/BF02386481

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  10 in total

1.  Assembly of the mitochondrial membrane system: partial sequence of a mitochondrial ATPase gene in Saccharomyces cerevisiae.

Authors:  G Macino; A Tzagoloff
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

2.  Use of the UGA terminator as a tryptophan codon in yeast mitochondria.

Authors:  G Macino; G Coruzzi; F G Nobrega; M Li; A Tzagoloff
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

3.  RNA codewords and protein synthesis, VII. On the general nature of the RNA code.

Authors:  M Nirenberg; P Leder; M Bernfield; R Brimacombe; J Trupin; F Rottman; C O'Neal
Journal:  Proc Natl Acad Sci U S A       Date:  1965-05       Impact factor: 11.205

4.  Studies on polynucleotides, XLIX. Stimulation of the binding of aminoacyl-sRNA's to ribosomes by ribotrinucleotides and a survey of codon assignments for 20 amino acids.

Authors:  D Söll; E Ohtsuka; D S Jones; R Lohrmann; H Hayatsu; S Nishimura; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1965-11       Impact factor: 11.205

5.  Genetic code and optimal resistance to the effects of mutations.

Authors:  A Figureau; M Pouzet
Journal:  Orig Life       Date:  1984

Review 6.  Experimental studies related to the origin of the genetic code and the process of protein synthesis--a review.

Authors:  J C Lacey; D W Mullins
Journal:  Orig Life       Date:  1983-03

7.  The logic of the genetic code: synonyms and optimality against effects of mutations.

Authors:  J M Labouygues; A Figureau
Journal:  Orig Life       Date:  1984

8.  Noise immunity of the genetic code.

Authors:  G Cullmann; J M Labouygues
Journal:  Biosystems       Date:  1983       Impact factor: 1.973

Review 9.  Selforganization of matter and the evolution of biological macromolecules.

Authors:  M Eigen
Journal:  Naturwissenschaften       Date:  1971-10

10.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

  10 in total
  2 in total

Review 1.  The case for an error minimizing standard genetic code.

Authors:  Stephen J Freeland; Tao Wu; Nick Keulmann
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

2.  Optimization and the genetic code.

Authors:  A Figureau
Journal:  Orig Life Evol Biosph       Date:  1989       Impact factor: 1.950

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.