Literature DB >> 36268108

Digital workflows for pathological assessment of rat estrous cycle stage using images of uterine horn and vaginal tissue.

Shinichi Onishi1, Riku Egami2, Yuya Nakamura2, Yoshinobu Nagashima2, Kaori Nishihara1, Saori Matsuo1, Atsuko Murai1, Shuji Hayashi1, Yoshifumi Uesumi2, Atsuhiko Kato1, Hiroyuki Tsunoda2, Masaki Yamazaki3, Hideaki Mizuno2.   

Abstract

Assessment of the estrous cycle of mature female mammals is an important component of verifying the efficacy and safety of drug candidates. The common pathological approach of relying on expert observation has several drawbacks, including laborious work and inter-viewer variability. The recent advent of image recognition technologies using deep learning is expected to bring substantial benefits to such pathological assessments. We herein propose 2 distinct deep learning-based workflows to classify the estrous cycle stage from tissue images of the uterine horn and vagina, respectively. These constructed models were able to classify the estrous cycle stages with accuracy comparable with that of expert pathologists. Our digital workflows allow efficient pathological assessments of the estrous cycle stage in rats and are thus expected to accelerate drug research and development.
© 2022 The Authors.

Entities:  

Keywords:  Deep learning; Digital workflow; Estrous cycle; Image recognition; Pathological assessment

Year:  2022        PMID: 36268108      PMCID: PMC9577039          DOI: 10.1016/j.jpi.2022.100120

Source DB:  PubMed          Journal:  J Pathol Inform


  14 in total

Review 1.  Evaluating rodent vaginal and uterine histology in toxicity studies.

Authors:  Shaunfang Li; Barbara Davis
Journal:  Birth Defects Res B Dev Reprod Toxicol       Date:  2007-06

2.  Digital Microscopy, Image Analysis, and Virtual Slide Repository.

Authors:  Famke Aeffner; Hibret A Adissu; Michael C Boyle; Robert D Cardiff; Erik Hagendorn; Mark J Hoenerhoff; Robert Klopfleisch; Susan Newbigging; Dirk Schaudien; Oliver Turner; Kristin Wilson
Journal:  ILAR J       Date:  2018-12-01

Review 3.  The impact of pre- and post-image processing techniques on deep learning frameworks: A comprehensive review for digital pathology image analysis.

Authors:  Massimo Salvi; U Rajendra Acharya; Filippo Molinari; Kristen M Meiburger
Journal:  Comput Biol Med       Date:  2020-11-21       Impact factor: 4.589

4.  A Workflow for the Performance of the Differential Ovarian Follicle Count Using Deep Neuronal Networks.

Authors:  Eleonora Carboni; Heike Marxfeld; Hanati Tuoken; Christian Klukas; Till Eggers; Sibylle Gröters; Bennard van Ravenzwaay
Journal:  Toxicol Pathol       Date:  2020-12-08       Impact factor: 1.902

5.  Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks.

Authors:  Shaoqing Ren; Kaiming He; Ross Girshick; Jian Sun
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-06-06       Impact factor: 6.226

6.  Hands-on with IBM Visual Insights.

Authors:  Shirui Luo; Volodymyr Kindratenko
Journal:  Comput Sci Eng       Date:  2020-08-14       Impact factor: 2.152

7.  Special Issue on Digital Pathology, Tissue Image Analysis, Artificial Intelligence, and Machine Learning: Approximation of the Effect of Novel Technologies on Toxicologic Pathology.

Authors:  Famke Aeffner; Tobias Sing; Oliver C Turner
Journal:  Toxicol Pathol       Date:  2021-04-12       Impact factor: 1.902

8.  Interrater reliability: the kappa statistic.

Authors:  Mary L McHugh
Journal:  Biochem Med (Zagreb)       Date:  2012       Impact factor: 2.313

9.  Deep learning-based classification of the mouse estrous cycle stages.

Authors:  Kyohei Sano; Shingo Matsuda; Suguru Tohyama; Daisuke Komura; Eiji Shimizu; Chihiro Sutoh
Journal:  Sci Rep       Date:  2020-07-16       Impact factor: 4.379

10.  Object and anatomical feature recognition in surgical video images based on a convolutional neural network.

Authors:  Yoshiko Bamba; Shimpei Ogawa; Michio Itabashi; Hironari Shindo; Shingo Kameoka; Takahiro Okamoto; Masakazu Yamamoto
Journal:  Int J Comput Assist Radiol Surg       Date:  2021-06-24       Impact factor: 2.924

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