Literature DB >> 36268092

Number of necessary training examples for Neural Networks with different number of trainable parameters.

Th I Götz1,2,3, S Göb1, S Sawant1, X F Erick1, T Wittenberg1, C Schmidkonz4,3, A M Tomé5, E W Lang6, A Ramming2.   

Abstract

In this work, the network complexity should be reduced with a concomitant reduction in the number of necessary training examples. The focus thus was on the dependence of proper evaluation metrics on the number of adjustable parameters of the considered deep neural network. The used data set encompassed Hematoxylin and Eosin (H&E) colored cell images provided by various clinics. We used a deep convolutional neural network to get the relation between a model's complexity, its concomitant set of parameters, and the size of the training sample necessary to achieve a certain classification accuracy. The complexity of the deep neural networks was reduced by pruning a certain amount of filters in the network. As expected, the unpruned neural network showed best performance. The network with the highest number of trainable parameter achieved, within the estimated standard error of the optimized cross-entropy loss, best results up to 30% pruning. Strongly pruned networks are highly viable and the classification accuracy declines quickly with decreasing number of training patterns. However, up to a pruning ratio of 40%, we found a comparable performance of pruned and unpruned deep convolutional neural networks (DCNN) and densely connected convolutional networks (DCCN).
© 2022 Published by Elsevier Inc. on behalf of Association for Pathology Informatics.

Entities:  

Keywords:  Cell segmentation; DNN complexity; Deep neural networks; Pruning; Training sample size

Year:  2022        PMID: 36268092      PMCID: PMC9577052          DOI: 10.1016/j.jpi.2022.100114

Source DB:  PubMed          Journal:  J Pathol Inform


  30 in total

1.  Deep Adversarial Training for Multi-Organ Nuclei Segmentation in Histopathology Images.

Authors:  Faisal Mahmood; Daniel Borders; Richard J Chen; Gregory N Mckay; Kevan J Salimian; Alexander Baras; Nicholas J Durr
Journal:  IEEE Trans Med Imaging       Date:  2020-10-28       Impact factor: 10.048

2.  Toward Compact ConvNets via Structure-Sparsity Regularized Filter Pruning.

Authors:  Shaohui Lin; Rongrong Ji; Yuchao Li; Cheng Deng; Xuelong Li
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2019-04-12       Impact factor: 10.451

3.  A deep learning framework for modeling structural features of RNA-binding protein targets.

Authors:  Sai Zhang; Jingtian Zhou; Hailin Hu; Haipeng Gong; Ligong Chen; Chao Cheng; Jianyang Zeng
Journal:  Nucleic Acids Res       Date:  2015-10-13       Impact factor: 16.971

4.  High-Content Analysis of Breast Cancer Using Single-Cell Deep Transfer Learning.

Authors:  Chetak Kandaswamy; Luís M Silva; Luís A Alexandre; Jorge M Santos
Journal:  J Biomol Screen       Date:  2016-01-08

Review 5.  Deep learning for cellular image analysis.

Authors:  Erick Moen; Dylan Bannon; Takamasa Kudo; William Graf; Markus Covert; David Van Valen
Journal:  Nat Methods       Date:  2019-05-27       Impact factor: 28.547

6.  A multi-scale convolutional neural network for phenotyping high-content cellular images.

Authors:  William J Godinez; Imtiaz Hossain; Stanley E Lazic; John W Davies; Xian Zhang
Journal:  Bioinformatics       Date:  2017-07-01       Impact factor: 6.937

7.  Advances in nonnegative matrix and tensor factorization.

Authors:  A Cichocki; M Mørup; P Smaragdis; W Wang; R Zdunek
Journal:  Comput Intell Neurosci       Date:  2008

8.  Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments.

Authors:  David A Van Valen; Takamasa Kudo; Keara M Lane; Derek N Macklin; Nicolas T Quach; Mialy M DeFelice; Inbal Maayan; Yu Tanouchi; Euan A Ashley; Markus W Covert
Journal:  PLoS Comput Biol       Date:  2016-11-04       Impact factor: 4.475

9.  Reprogramming Cdr2-Dependent Geometry-Based Cell Size Control in Fission Yeast.

Authors:  Giuseppe Facchetti; Benjamin Knapp; Ignacio Flor-Parra; Fred Chang; Martin Howard
Journal:  Curr Biol       Date:  2019-01-10       Impact factor: 10.834

10.  nucleAIzer: A Parameter-free Deep Learning Framework for Nucleus Segmentation Using Image Style Transfer.

Authors:  Reka Hollandi; Abel Szkalisity; Timea Toth; Ervin Tasnadi; Csaba Molnar; Botond Mathe; Istvan Grexa; Jozsef Molnar; Arpad Balind; Mate Gorbe; Maria Kovacs; Ede Migh; Allen Goodman; Tamas Balassa; Krisztian Koos; Wenyu Wang; Juan Carlos Caicedo; Norbert Bara; Ferenc Kovacs; Lassi Paavolainen; Tivadar Danka; Andras Kriston; Anne Elizabeth Carpenter; Kevin Smith; Peter Horvath
Journal:  Cell Syst       Date:  2020-05-07       Impact factor: 10.304

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.