Literature DB >> 36267429

Machine learning in the diagnosis of asthma phenotypes during coronavirus disease 2019 pandemic.

Agnieszka Gawlewicz-Mroczka1, Adam Pytlewski2, Natalia Celejewska-Wójcik1, Adam Ćmiel3, Anna Gielicz1, Marek Sanak1, Lucyna Mastalerz1.   

Abstract

Background: During the coronavirus disease 2019 (COVID-19) pandemic, it has become a pressing need to be able to diagnose aspirin hypersensitivity in patients with asthma without the need to use oral aspirin challenge (OAC) testing. OAC is time consuming and is associated with the risk of severe hypersensitive reactions. In this study, we sought to investigate whether machine learning (ML) based on some clinical and laboratory procedures performed during the pandemic might be used for discriminating between patients with aspirin hypersensitivity and those with aspirin-tolerant asthma.
Methods: We used a prospective database of 135 patients with non-steroidal anti-inflammatory drug (NSAID)-exacerbated respiratory disease (NERD) and 81 NSAID-tolerant (NTA) patients with asthma who underwent OAC. Clinical characteristics, inflammatory phenotypes based on sputum cells, as well as eicosanoid levels in induced sputum supernatant and urine were extracted for the purpose of applying ML techniques.
Results: The overall best ML model, neural network (NN), trained on a set of best features, achieved a sensitivity of 95% and a specificity of 76% for diagnosing NERD. The 3 promising models (i.e., multiple logistic regression, support vector machine, and NN) trained on a set of easy-to-obtain features including only clinical characteristics and laboratory data achieved a sensitivity of 97% and a specificity of 67%. Conclusions: ML techniques are becoming a promising tool for discriminating between patients with NERD and NTA. The models are easy to use, safe, and achieve very good results, which is particularly important during the COVID-19 pandemic.
© 2022 The Authors. Clinical and Translational Allergy published by John Wiley & Sons Ltd on behalf of European Academy of Allergy and Clinical Immunology.

Entities:  

Keywords:  COVID‐19 pandemic; machine learning; nonsteroidal anti‐inflammatory drug (NSAID)–exacerbated respiratory disease (NERD); nonsteroidal anti‐inflammatory drug tolerant asthma (NTA); oral aspirin challenge

Year:  2022        PMID: 36267429      PMCID: PMC9579891          DOI: 10.1002/clt2.12201

Source DB:  PubMed          Journal:  Clin Transl Allergy        ISSN: 2045-7022            Impact factor:   5.657


  18 in total

1.  Standardised methodology of sputum induction and processing.

Authors:  R Djukanović; P J Sterk; J V Fahy; F E Hargreave
Journal:  Eur Respir J Suppl       Date:  2002-09

Review 2.  Mechanisms and therapeutic strategies for non-T2 asthma.

Authors:  Eric Sze; Anurag Bhalla; Parameswaran Nair
Journal:  Allergy       Date:  2019-08-14       Impact factor: 13.146

3.  Multidisciplinary consensus on sputum induction biosafety during the COVID-19 pandemic.

Authors:  Astrid Crespo-Lessmann; Vicente Plaza
Journal:  Allergy       Date:  2021-01-19       Impact factor: 13.146

4.  Prediction of lung cancer patient survival via supervised machine learning classification techniques.

Authors:  Chip M Lynch; Behnaz Abdollahi; Joshua D Fuqua; Alexandra R de Carlo; James A Bartholomai; Rayeanne N Balgemann; Victor H van Berkel; Hermann B Frieboes
Journal:  Int J Med Inform       Date:  2017-09-25       Impact factor: 4.046

5.  Sputum biomarkers during aspirin desensitization in nonsteroidal anti-inflammatory drugs exacerbated respiratory disease.

Authors:  Katarzyna Ewa Tyrak; Izabela Kupryś-Lipińska; Ewa Czarnobilska; Bogdan Jakieła; Kinga Pajdzik; Adam Ćmiel; Hanna Plutecka; Mateusz Koziej; Aleksandra Gawrońska; Ewa Konduracka; Piotr Kuna; Marek Sanak; Lucyna Mastalerz
Journal:  Respir Med       Date:  2019-04-30       Impact factor: 3.415

6.  Prostaglandin E2 decrease in induced sputum of hypersensitive asthmatics during oral challenge with aspirin.

Authors:  Lucyna Mastalerz; Katarzyna E Tyrak; Maria Ignacak; Ewa Konduracka; Filip Mejza; Adam Ćmiel; Michał Buczek; Adrianna Kot; Krzysztof Oleś; Marek Sanak
Journal:  Allergy       Date:  2018-12-05       Impact factor: 13.146

7.  Automated identification of an aspirin-exacerbated respiratory disease cohort.

Authors:  Katherine N Cahill; Christina B Johns; Jing Cui; Paige Wickner; David W Bates; Tanya M Laidlaw; Patrick E Beeler
Journal:  J Allergy Clin Immunol       Date:  2016-07-25       Impact factor: 10.793

8.  Reduced expression of the prostaglandin E2 receptor E-prostanoid 2 on bronchial mucosal leukocytes in patients with aspirin-sensitive asthma.

Authors:  Chris J Corrigan; Rahilya L Napoli; Qiu Meng; Cailong Fang; Huifen Wu; Keri Tochiki; Victoria Reay; Tak H Lee; Sun Ying
Journal:  J Allergy Clin Immunol       Date:  2012-03-13       Impact factor: 10.793

9.  Artificial neural network identifies nonsteroidal anti-inflammatory drugs exacerbated respiratory disease (N-ERD) cohort.

Authors:  Katarzyna Ewa Tyrak; Kinga Pajdzik; Ewa Konduracka; Adam Ćmiel; Bogdan Jakieła; Natalia Celejewska-Wójcik; Gabriela Trąd; Adrianna Kot; Anna Urbańska; Ewa Zabiegło; Radosław Kacorzyk; Izabela Kupryś-Lipińska; Krzysztof Oleś; Piotr Kuna; Marek Sanak; Lucyna Mastalerz
Journal:  Allergy       Date:  2020-03-03       Impact factor: 13.146

Review 10.  Artificial Intelligence/Machine Learning in Respiratory Medicine and Potential Role in Asthma and COPD Diagnosis.

Authors:  Alan Kaplan; Hui Cao; J Mark FitzGerald; Nick Iannotti; Eric Yang; Janwillem W H Kocks; Konstantinos Kostikas; David Price; Helen K Reddel; Ioanna Tsiligianni; Claus F Vogelmeier; Pascal Pfister; Paul Mastoridis
Journal:  J Allergy Clin Immunol Pract       Date:  2021-02-19
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