Literature DB >> 36266497

Principles and practice of virus induced gene silencing for functional genomics in plants.

Neelam Jagram1, Indranil Dasgupta2.   

Abstract

Virus induced gene silencing (VIGS) has, of late, emerged as an important tool for transient silencing of genes in plants. This is now being increasingly used to determine functions of novel genes in a wide variety of plants, many of which are important crops yielding food and fiber or are sources of products having pharmaceutical uses. The technology for VIGS comprises the development of vectors derived from viruses, choosing the optimal orientation and size of the gene to be targeted and adopting the most suitable method of inoculation. This review gives a brief overview of the main aspects of VIGS technology as is being practiced. It also discusses the challenges the technology faces and the possible way ahead to improve its robustness, so that the technology finds wider applications.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Functional genomics; Gene silencing; VIGS; Viral vectors

Year:  2022        PMID: 36266497     DOI: 10.1007/s11262-022-01941-5

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.198


  79 in total

1.  Virus-induced gene silencing (VIGS) of genes expressed in root, leaf, and meiotic tissues of wheat.

Authors:  Harvinder S Bennypaul; Jasdeep S Mutti; Sachin Rustgi; Neeraj Kumar; Patricia A Okubara; Kulvinder S Gill
Journal:  Funct Integr Genomics       Date:  2011-09-21       Impact factor: 3.410

2.  Targeted mutagenesis using zinc-finger nucleases in Arabidopsis.

Authors:  Alan Lloyd; Christopher L Plaisier; Dana Carroll; Gary N Drews
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-26       Impact factor: 11.205

3.  A similarity between viral defense and gene silencing in plants.

Authors:  F Ratcliff; B D Harrison; D C Baulcombe
Journal:  Science       Date:  1997-06-06       Impact factor: 47.728

Review 4.  TALENs: a widely applicable technology for targeted genome editing.

Authors:  J Keith Joung; Jeffry D Sander
Journal:  Nat Rev Mol Cell Biol       Date:  2012-11-21       Impact factor: 94.444

5.  Virus-mediated efficient induction of epigenetic modifications of endogenous genes with phenotypic changes in plants.

Authors:  Akira Kanazawa; Jun-Ichi Inaba; Hanako Shimura; Shungo Otagaki; Sayuri Tsukahara; Akihiko Matsuzawa; Bo Min Kim; Kazunori Goto; Chikara Masuta
Journal:  Plant J       Date:  2010-11-09       Impact factor: 6.417

6.  Virus-induced gene silencing can persist for more than 2 years and also be transmitted to progeny seedlings in Nicotiana benthamiana and tomato.

Authors:  Muthappa Senthil-Kumar; Kirankumar S Mysore
Journal:  Plant Biotechnol J       Date:  2011-01-25       Impact factor: 9.803

7.  From classical mutagenesis to nuclease-based breeding - directing natural DNA repair for a natural end-product.

Authors:  Michael Pacher; Holger Puchta
Journal:  Plant J       Date:  2017-03-11       Impact factor: 6.417

8.  Cytoplasmic inhibition of carotenoid biosynthesis with virus-derived RNA.

Authors:  M H Kumagai; J Donson; G della-Cioppa; D Harvey; K Hanley; L K Grill
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-28       Impact factor: 11.205

Review 9.  The diversity, biogenesis, and activities of endogenous silencing small RNAs in Arabidopsis.

Authors:  Nicolas G Bologna; Olivier Voinnet
Journal:  Annu Rev Plant Biol       Date:  2014-02-26       Impact factor: 26.379

10.  Flower development of Phalaenopsis orchid involves functionally divergent SEPALLATA-like genes.

Authors:  Zhao-Jun Pan; You-Yi Chen; Jian-Syun Du; Yun-Yu Chen; Mei-Chu Chung; Wen-Chieh Tsai; Chun-Neng Wang; Hong-Hwa Chen
Journal:  New Phytol       Date:  2014-02-14       Impact factor: 10.151

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