Literature DB >> 36263065

SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing.

Yan Wang, Kaiyuan Sun, Yang Pan, Lan Yi, Da Huo, Yanpeng Wu, Shuaibing Dong, Jinxin Guo, Xiangfeng Dou, Wei Wang, Shuangsheng Wu, Xufang Bai, Hongjie Yu, Quanyi Wang.   

Abstract

Prior to the emergence of the Omicron variant, many cities in China had been able to maintain a "Zero-COVID" policy. They were able to achieve this without blanket city-wide lockdown and through widespread testing and an extensive set of nonpharmaceutical interventions (NPIs), such as mask wearing, contact tracing, and social distancing. We wanted to examine the effectiveness of such a policy in containing SARS-CoV-2 in the early stage of the pandemic. Therefore, we developed a fully stochastic, spatially structured, agent-based model of SARS-CoV-2 ancestral strain and reconstructed the Beijing Xinfadi outbreak through computational simulations. We found that screening for symptoms and among high-risk populations served as methods to discover cryptic community transmission in the early stage of the outbreak. Effective contact tracing could greatly reduce transmission. Targeted community lockdown and temporal mobility restriction could slow down the spatial spread of the virus, with much less of the population being affected. Population-wide mass testing could further improve the speed at which the outbreak is contained. Our analysis suggests that the containment of SARS-CoV-2 ancestral strains was certainly possible. Outbreak suppression and containment at the beginning of the pandemic, before the virus had the opportunity to undergo extensive adaptive evolution with increasing fitness in the human population, could be much more cost-effective in averting the overall pandemic disease burden and socioeconomic cost.

Entities:  

Year:  2022        PMID: 36263065      PMCID: PMC9580389          DOI: 10.1101/2022.09.12.22279850

Source DB:  PubMed          Journal:  medRxiv


  10 in total

1.  Time Course of a Second Outbreak of COVID-19 in Beijing, China, June-July 2020.

Authors:  Zunyou Wu; Quanyi Wang; Jing Zhao; Peng Yang; Jennifer M McGoogan; Zijian Feng; Chun Huang
Journal:  JAMA       Date:  2020-10-13       Impact factor: 56.272

2.  Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study.

Authors:  Katherine A Twohig; Tommy Nyberg; Asad Zaidi; Simon Thelwall; Mary A Sinnathamby; Shirin Aliabadi; Shaun R Seaman; Ross J Harris; Russell Hope; Jamie Lopez-Bernal; Eileen Gallagher; Andre Charlett; Daniela De Angelis; Anne M Presanis; Gavin Dabrera
Journal:  Lancet Infect Dis       Date:  2021-08-27       Impact factor: 25.071

3.  Coronavirus disease 2019 outbreak in Beijing's Xinfadi Market, China: a modeling study to inform future resurgence response.

Authors:  Xiao-Li Wang; Xin Lin; Peng Yang; Zun-You Wu; Gang Li; Jennifer M McGoogan; Zeng-Tao Jiao; Xin-Jun He; Si-Qi Li; Hong-Hao Shi; Jing-Yuan Wang; Sheng-Jie Lai; Chun Huang; Quan-Yi Wang
Journal:  Infect Dis Poverty       Date:  2021-05-07       Impact factor: 4.520

4.  SARS-CoV-2 infection in free-ranging white-tailed deer.

Authors:  Vanessa L Hale; Patricia M Dennis; Dillon S McBride; Jacqueline M Nolting; Christopher Madden; Devra Huey; Margot Ehrlich; Jennifer Grieser; Jenessa Winston; Dusty Lombardi; Stormy Gibson; Linda Saif; Mary L Killian; Kristina Lantz; Rachel M Tell; Mia Torchetti; Suelee Robbe-Austerman; Martha I Nelson; Seth A Faith; Andrew S Bowman
Journal:  Nature       Date:  2021-12-23       Impact factor: 69.504

5.  Infection of dogs with SARS-CoV-2.

Authors:  Thomas H C Sit; Christopher J Brackman; Sin Ming Ip; Karina W S Tam; Pierra Y T Law; Esther M W To; Veronica Y T Yu; Leslie D Sims; Dominic N C Tsang; Daniel K W Chu; Ranawaka A P M Perera; Leo L M Poon; Malik Peiris
Journal:  Nature       Date:  2020-05-14       Impact factor: 49.962

6.  Clinical severity of, and effectiveness of mRNA vaccines against, covid-19 from omicron, delta, and alpha SARS-CoV-2 variants in the United States: prospective observational study.

Authors:  Adam S Lauring; Mark W Tenforde; James D Chappell; Manjusha Gaglani; Adit A Ginde; Tresa McNeal; Shekhar Ghamande; David J Douin; H Keipp Talbot; Jonathan D Casey; Nicholas M Mohr; Anne Zepeski; Nathan I Shapiro; Kevin W Gibbs; D Clark Files; David N Hager; Arber Shehu; Matthew E Prekker; Heidi L Erickson; Matthew C Exline; Michelle N Gong; Amira Mohamed; Nicholas J Johnson; Vasisht Srinivasan; Jay S Steingrub; Ithan D Peltan; Samuel M Brown; Emily T Martin; Arnold S Monto; Akram Khan; Catherine L Hough; Laurence W Busse; Caitlin C Ten Lohuis; Abhijit Duggal; Jennifer G Wilson; Alexandra June Gordon; Nida Qadir; Steven Y Chang; Christopher Mallow; Carolina Rivas; Hilary M Babcock; Jennie H Kwon; Natasha Halasa; Carlos G Grijalva; Todd W Rice; William B Stubblefield; Adrienne Baughman; Kelsey N Womack; Jillian P Rhoads; Christopher J Lindsell; Kimberly W Hart; Yuwei Zhu; Katherine Adams; Stephanie J Schrag; Samantha M Olson; Miwako Kobayashi; Jennifer R Verani; Manish M Patel; Wesley H Self
Journal:  BMJ       Date:  2022-03-09

7.  Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study.

Authors:  Tommy Nyberg; Neil M Ferguson; Sophie G Nash; Harriet H Webster; Seth Flaxman; Nick Andrews; Wes Hinsley; Jamie Lopez Bernal; Meaghan Kall; Samir Bhatt; Paula Blomquist; Asad Zaidi; Erik Volz; Nurin Abdul Aziz; Katie Harman; Sebastian Funk; Sam Abbott; Russell Hope; Andre Charlett; Meera Chand; Azra C Ghani; Shaun R Seaman; Gavin Dabrera; Daniela De Angelis; Anne M Presanis; Simon Thelwall
Journal:  Lancet       Date:  2022-03-16       Impact factor: 202.731

8.  Estimating the generation interval and inferring the latent period of COVID-19 from the contact tracing data.

Authors:  Shi Zhao; Biao Tang; Salihu S Musa; Shujuan Ma; Jiayue Zhang; Minyan Zeng; Qingping Yun; Wei Guo; Yixiang Zheng; Zuyao Yang; Zhihang Peng; Marc Kc Chong; Mohammad Javanbakht; Daihai He; Maggie H Wang
Journal:  Epidemics       Date:  2021-06-24       Impact factor: 4.396

9.  Transmission of SARS-CoV-2 on mink farms between humans and mink and back to humans.

Authors:  Bas B Oude Munnink; Reina S Sikkema; David F Nieuwenhuijse; Robert Jan Molenaar; Emmanuelle Munger; Richard Molenkamp; Arco van der Spek; Paulien Tolsma; Ariene Rietveld; Miranda Brouwer; Noortje Bouwmeester-Vincken; Frank Harders; Renate Hakze-van der Honing; Marjolein C A Wegdam-Blans; Ruth J Bouwstra; Corine GeurtsvanKessel; Annemiek A van der Eijk; Francisca C Velkers; Lidwien A M Smit; Arjan Stegeman; Wim H M van der Poel; Marion P G Koopmans
Journal:  Science       Date:  2020-11-10       Impact factor: 47.728

  10 in total

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