Literature DB >> 36261651

A minimum data standard for vector competence experiments.

Velen Yifei Wu1, Binqi Chen1, Rebecca Christofferson2, Gregory Ebel3, Anna C Fagre3, Emily N Gallichotte3, Amy R Sweeny1,4, Colin J Carlson5,6,7, Sadie J Ryan8,9,10.   

Abstract

The growing threat of vector-borne diseases, highlighted by recent epidemics, has prompted increased focus on the fundamental biology of vector-virus interactions. To this end, experiments are often the most reliable way to measure vector competence (the potential for arthropod vectors to transmit certain pathogens). Data from these experiments are critical to understand outbreak risk, but - despite having been collected and reported for a large range of vector-pathogen combinations - terminology is inconsistent, records are scattered across studies, and the accompanying publications often share data with insufficient detail for reuse or synthesis. Here, we present a minimum data and metadata standard for reporting the results of vector competence experiments. Our reporting checklist strikes a balance between completeness and labor-intensiveness, with the goal of making these important experimental data easier to find and reuse in the future, without much added effort for the scientists generating the data. To illustrate the standard, we provide an example that reproduces results from a study of Aedes aegypti vector competence for Zika virus.
© 2022. The Author(s).

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Year:  2022        PMID: 36261651      PMCID: PMC9582208          DOI: 10.1038/s41597-022-01741-4

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   8.501


  22 in total

1.  Rearing temperature influences flavivirus vector competence of mosquitoes.

Authors:  B H Kay; I D Fanning; P Mottram
Journal:  Med Vet Entomol       Date:  1989-10       Impact factor: 2.739

2.  A design framework and exemplar metrics for FAIRness.

Authors:  Mark D Wilkinson; Susanna-Assunta Sansone; Erik Schultes; Peter Doorn; Luiz Olavo Bonino da Silva Santos; Michel Dumontier
Journal:  Sci Data       Date:  2018-06-26       Impact factor: 6.444

3.  Potential for Zika virus transmission by mosquitoes in temperate climates.

Authors:  Marcus S C Blagrove; Cyril Caminade; Peter J Diggle; Edward I Patterson; Ken Sherlock; Gail E Chapman; Jenny Hesson; Soeren Metelmann; Philip J McCall; Gareth Lycett; Jolyon Medlock; Grant L Hughes; Alessandra Della Torre; Matthew Baylis
Journal:  Proc Biol Sci       Date:  2020-07-08       Impact factor: 5.349

4.  MIReAD, a minimum information standard for reporting arthropod abundance data.

Authors:  Samuel S C Rund; Kyle Braak; Lauren Cator; Kyle Copas; Scott J Emrich; Gloria I Giraldo-Calderón; Michael A Johansson; Naveed Heydari; Donald Hobern; Sarah A Kelly; Daniel Lawson; Cynthia Lord; Robert M MacCallum; Dominique G Roche; Sadie J Ryan; Dmitry Schigel; Kurt Vandegrift; Matthew Watts; Jennifer M Zaspel; Samraat Pawar
Journal:  Sci Data       Date:  2019-04-25       Impact factor: 6.444

5.  German Culex pipiens biotype molestus and Culex torrentium are vector-competent for Usutu virus.

Authors:  Cora M Holicki; Dorothee E Scheuch; Ute Ziegler; Julia Lettow; Helge Kampen; Doreen Werner; Martin H Groschup
Journal:  Parasit Vectors       Date:  2020-12-30       Impact factor: 3.876

6.  Not all mosquitoes are created equal: A synthesis of vector competence experiments reinforces virus associations of Australian mosquitoes.

Authors:  Morgan P Kain; Eloise B Skinner; Tejas S Athni; Ana L Ramirez; Erin A Mordecai; Andrew F van den Hurk
Journal:  PLoS Negl Trop Dis       Date:  2022-10-04

7.  Effects of larval rearing temperature on immature development and West Nile virus vector competence of Culex tarsalis.

Authors:  Brittany L Dodson; Laura D Kramer; Jason L Rasgon
Journal:  Parasit Vectors       Date:  2012-09-11       Impact factor: 3.876

8.  The FAIR Guiding Principles for scientific data management and stewardship.

Authors:  Mark D Wilkinson; Michel Dumontier; I Jsbrand Jan Aalbersberg; Gabrielle Appleton; Myles Axton; Arie Baak; Niklas Blomberg; Jan-Willem Boiten; Luiz Bonino da Silva Santos; Philip E Bourne; Jildau Bouwman; Anthony J Brookes; Tim Clark; Mercè Crosas; Ingrid Dillo; Olivier Dumon; Scott Edmunds; Chris T Evelo; Richard Finkers; Alejandra Gonzalez-Beltran; Alasdair J G Gray; Paul Groth; Carole Goble; Jeffrey S Grethe; Jaap Heringa; Peter A C 't Hoen; Rob Hooft; Tobias Kuhn; Ruben Kok; Joost Kok; Scott J Lusher; Maryann E Martone; Albert Mons; Abel L Packer; Bengt Persson; Philippe Rocca-Serra; Marco Roos; Rene van Schaik; Susanna-Assunta Sansone; Erik Schultes; Thierry Sengstag; Ted Slater; George Strawn; Morris A Swertz; Mark Thompson; Johan van der Lei; Erik van Mulligen; Jan Velterop; Andra Waagmeester; Peter Wittenburg; Katherine Wolstencroft; Jun Zhao; Barend Mons
Journal:  Sci Data       Date:  2016-03-15       Impact factor: 6.444

9.  The frontier of data discoverability: Why we need to share our data.

Authors:  Theresa M Culley
Journal:  Appl Plant Sci       Date:  2017-10-17       Impact factor: 1.936

10.  Zika virus outbreak in the Pacific: Vector competence of regional vectors.

Authors:  Elodie Calvez; Laurence Mousson; Marie Vazeille; Olivia O'Connor; Van-Mai Cao-Lormeau; Françoise Mathieu-Daudé; Nicolas Pocquet; Anna-Bella Failloux; Myrielle Dupont-Rouzeyrol
Journal:  PLoS Negl Trop Dis       Date:  2018-07-17
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