Literature DB >> 36253613

Rapid Detection of Strawberry Mild Yellow Edge Virus with a Lateral Flow Strip Reverse Transcription Recombinase Polymerase Amplification Assay.

Xiaohua Zou1, Chao Dong2, Yiduo Ni2, Qinghua Gao3.   

Abstract

Strawberry mild yellow edge virus (SMYEV) is a latent virus that severely affects the yield and quality of strawberry fruit. The technology suitable for rapid and accurate detection of SMYEV on site is important to effectively control its spread. In this study, a reverse transcription recombinase polymerase amplification combined with lateral flow strip (SMYEV-RT-RPA-LF), targeting the conserved genome of Beijing SMYEV isolate, was established to diagnose SMYEV in strawberries. The SMYEV-RT-RPA-LF assay showed no cross-reaction with other strawberry viruses. The sensitivity of SMYEV-RT-RPA-L assay was 100 times higher than that of RT-PCR (10 pg/μL). In addition, through the detection of suspected samples in the field, it was found that the accuracy of SMYEV-RT-RPA-L assay was consistent with the RT-PCR results. However, compared with RT-PCR, SMYEV-RT-RPA-LF assay has the advantages of simple operation, time savings, and high specificity and sensitivity, indicating the potential application of SMYEV-RT-RPA-LF in the rapid field diagnosis of SMYEV.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

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Year:  2022        PMID: 36253613     DOI: 10.1007/s00284-022-03045-7

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.343


  13 in total

1.  Characterization and Recent Advances in Detection of Strawberry Viruses.

Authors:  Robert R Martin; Ioannis E Tzanetakis
Journal:  Plant Dis       Date:  2006-04       Impact factor: 4.438

2.  Correction: Review: a comprehensive summary of a decade development of the recombinase polymerase amplification.

Authors:  Jia Li; Joanne Macdonald; Felix von Stetten
Journal:  Analyst       Date:  2020-03-02       Impact factor: 4.616

3.  Recombinase polymerase amplification-based assay to diagnose Giardia in stool samples.

Authors:  Zachary Austin Crannell; Miguel Mauricio Cabada; Alejandro Castellanos-Gonzalez; Ayesha Irani; Arthur Clinton White; Rebecca Richards-Kortum
Journal:  Am J Trop Med Hyg       Date:  2014-12-15       Impact factor: 2.345

4.  A novel rapid detection of Senecavirus A using recombinase polymerase amplification (RPA) coupled with lateral flow (LF) dipstrip.

Authors:  Huibao Wang; Jinjie Dong; Tao Zhang; Fan Wang; Rui Yang; Yong Zhang; Xingxu Zhao
Journal:  Anal Biochem       Date:  2022-03-01       Impact factor: 3.365

5.  Reverse transcription recombinase polymerase amplification assay for rapid detection of the cucurbit chlorotic yellows virus.

Authors:  Lianyi Zang; Ning Qiao; Xiaohui Sun; Xianping Zhang; Dan Zhao; Jintang Li; Xiaoping Zhu
Journal:  J Virol Methods       Date:  2021-11-27       Impact factor: 2.014

6.  Rapid detection of cagA-positive Helicobacter pylori based on duplex recombinase aided amplification combined with lateral flow dipstick assay.

Authors:  Xiaoyan Zhu; Yajiao Zhao; Chaohui Zhu; Yaxuan Wang; Yifeng Liu; Jianrong Su
Journal:  Diagn Microbiol Infect Dis       Date:  2022-02-23       Impact factor: 2.803

7.  Recombinase polymerase amplification lateral flow dipstick (RPA-LF) detection of Babesia orientalis in water buffalo (Bubalus babalis, Linnaeus, 1758).

Authors:  Xiaomeng An; Yangnan Zhao; Jie Cui; Qin Liu; Long Yu; Xueyan Zhan; Wanpo Zhang; Lan He; Junlong Zhao
Journal:  Vet Parasitol       Date:  2021-06-01       Impact factor: 2.738

8.  Rapid, Highly Sensitive, and Label-Free Pathogen Assay System Using a Solid-Phase Self-Interference Recombinase Polymerase Amplification Chip and Hyperspectral Interferometry.

Authors:  Xiangyu Jin; Rongxin Fu; Wenli Du; Xiaohui Shan; Zeyin Mao; Anni Deng; Xue Lin; Ya Su; Han Yang; Wenqi Lv; Hao Zhong; Guoliang Huang
Journal:  Anal Chem       Date:  2022-02-02       Impact factor: 6.986

9.  Rapid detection of Mycobacterium tuberculosis by recombinase polymerase amplification.

Authors:  David S Boyle; Ruth McNerney; Hwee Teng Low; Brandon Troy Leader; Ailyn C Pérez-Osorio; Jessica C Meyer; Denise M O'Sullivan; David G Brooks; Olaf Piepenburg; Matthew S Forrest
Journal:  PLoS One       Date:  2014-08-13       Impact factor: 3.240

10.  RDP4: Detection and analysis of recombination patterns in virus genomes.

Authors:  Darren P Martin; Ben Murrell; Michael Golden; Arjun Khoosal; Brejnev Muhire
Journal:  Virus Evol       Date:  2015-05-26
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