| Literature DB >> 36249509 |
Sergey G Arkhipov1,2,3, Tatyana B Bekker1,4,5, Anna A Gaydamaka1,2,3, Anna Y Likhacheva1,4, Evgeniy A Losev1,2, Elena V Boldyreva1,2.
Abstract
This contribution shares experience of teaching an interdisciplinary university course in crystal growth with examples ranging from geology to biology. This is an attempt to combine teaching the basics of the classical and non-classical theories of crystallization with impressive examples of crystals growing around us and in the human body, as well as demonstration of the common phenomena in the growth of minerals in nature, crystalline materials in industry and the laboratory, and biomimetic and stimulus-responsive crystals. Lectures are supported by laboratory exercises. Students can also perform an individual research project and present an oral contribution at a mini-conference. Examples of the topics considered in the course are given, and an extensive list of references to papers and web resources is provided, which may be useful to those who want to implement anything from the authors' experience. © Sergey G. Arkhipov et al. 2022.Entities:
Keywords: biopolymers; crystal growth; high pressure; materials; minerals; pharmaceuticals; polymorphism; teaching
Year: 2022 PMID: 36249509 PMCID: PMC9533743 DOI: 10.1107/S1600576722008032
Source DB: PubMed Journal: J Appl Crystallogr ISSN: 0021-8898 Impact factor: 4.868
The plan of lectures
| No. | Topic |
|---|---|
| 1 | Introductory lecture |
| Basics | |
| 2 | Crystal genesis. Basics of nucleation and crystal growth. Crystallization from solution, melt and gas phase. Thermodynamic and kinetic aspects. |
| 3 | Equilibrium and non-equilibrium shapes of crystals. Effect of impurities. |
| 4 | Defects in crystals and crystal growth. |
| 5 | Polymorphism. Isomorphism. |
| 6 | Non-classical mechanisms of crystallization. |
| Crystals and earth sciences | |
| 7 | Crystals from lava. Growth of minerals from the silicate melts at the surface and in the depth of the Earth. |
| 8 | Granites and basalts. Minerals under pressure. Crystal growth in the deep Earth. |
| 9 | Exsolution of solid solutions. Oriented intergrowth: from perthites to ‘stone texts’ (pegmatites). |
| 10 | Hydrothermal crystallization in the Earth’s crust. Opal and agates as interesting examples of silica mineralization. |
| 11 | Excursion to the mineralogical museum. |
| Complex phenomena that can be observed on crystallization | |
| 12 | Crystallization at high pressure. |
| 13 | Mechanical phenomena accompanying crystallization. Punin–Schtenberg effect. |
| 14 | Racemic effects on crystallization. Viedma ripening. |
| 15 | Crystallization of small-molecule organic compounds. Pitfalls and challenges. |
| Crystal growth and life sciences | |
| 16 | Crystallization and the pharmaceutical industry. |
| 17 | Biomineralization (including pathological biomineralization). |
| 18 | Crystallization of biopolymers. |
The topics of the laboratory exercises
| No. | Topic |
|---|---|
| Compulsory for everybody | |
| Crystallization by slow evaporation of aqueous solutions | |
| 1 | Crystallization of potassium and chrome alums by slow evaporation using a seed. |
| 2 | Crystallization of sodium chloride from pure aqueous solution and from a solution with urea as impurity. The effect on crystal shape. |
| 3 | Crystallization of the polymorphs of glycine. The role of impurities. |
| 4 | Crystallization of single crystals of cocrystals. |
| 5 | Effect of the crystallization conditions on nucleation and nucleus growth. |
| Crystallization from gas phase | |
| 6 | Crystallization from the gas phase. Benzoic acid as a case study. |
| Crystallization of poorly soluble compounds | |
| 7 | Crystallization of poorly soluble compounds by counter-diffusion. A case study of calcium carbonate. |
| 8 | Crystallization of proteins. Hanging-drop crystallization of lysozyme. Crystallization of lysozyme in a capillary. |
| Optional choices | |
| 9 | Crystallization in silica glue. Colored gardens. |
| 10 | Viedma ripening (KClO3 and γ-glycine as examples). |
| 11 | Freeze-drying as a tool of crystallizing highly dispersed but still crystalline particles. |
| 12 | Effect of impurities and defects on mechanical properties. Case study of NH4Cl (doping with Cu2+) and NaCl (whiskers). |
| 13 | High-pressure crystallization. Water and benzene as case studies. Recrystallization of β-chlorpropamide into γ-chlorpropamide. |
| 14 | Crystallization in gels. |
| 15 | Artificial minerals grown at high pressures and temperatures. |
| 16 | Lisegang rings and crystallization. |
| 17 | Redox crystallization. Copper crystals as a case study. |
| 18 | Crystal growth from the melt. |
| 19 | Crystallization of proteins using robots. |
| 20 | Polymorphism control of pharmaceuticals. |
| 21 | Sublimation growth of organic crystals. |
| 22 | Obtaining crystalline compounds by mechanochemical techniques. Comparison with crystallization from solution/melt. |
| 23 | Crystallization by counter-diffusion versus fast mixing of components. Ni dimethylglyoximate, multicomponent crystals in ‘glycine–oxalic acid–water–alcohol’ systems, lead oxalate, calcium carbonate and others as case studies. |
Examples of the titles of student presentations at the final student mini-conferences
| No. | Topic |
|---|---|
| 1 | Crystals of guanine in living organisms – growth and functions |
| 2 | ‘Bio-inspired devices’ based on crystals |
| 3 | ‘Bad’ and ‘good’ impurities in the single crystals of Si – classification, methods of introducing, methods of studying |
| 4 | Methods of obtaining quasicrystals |
| 5 | Crystallization in gels |
| 6 | Thermodynamics and kinetics of the nucleation and growth of the cocrystals of organic compounds |
| 7 | Biomineralization |
| 8 | Crystals growing in the human body: when are they needed, when are they harmful? How to prevent undesirable crystallization |
| 9 | Crystals in chocolate – polymorphism and product quality |
| 10 | Impact diamonds – how does their structure reflect the crystallization conditions? |
| 11 | Control and fine-tuning the properties of artificial diamonds in the course of their crystallization |
| 12 | Crystallization of agate |
| 13 | Crystallization in silicate glue – the physical and chemical processes beyond the ‘chemical gardens’ |
| 14 | Co-crystallization of poorly soluble compounds with MOFs [metal–organic frameworks], in order to find their crystal structures |
| 15 | Crystallization of membrane proteins |
| 16 | Noble opal as an example of a natural colloid system: structure, optical properties, crystallization |
| 17 | Decomposition of solid solutions in minerals |
| 18 | How can inclusions in minerals teach us about the history of crystallization? |
| 19 | Growth of single crystals during mechanical treatment of polycrystalline and non-crystalline samples |
| 20 | Crystallization in confined media |
| 21 | Automatic monitoring of the growth of protein crystals |
| 22 | Liquid crystals: structures, properties, applications |
| 23 | Classical and non-classical mechanisms of crystal growth |
| 24 | Hydrothermal growth of crystals |
| 25 | High-pressure crystallization |
| 26 | Crystal growth in food industry |
| 27 | Crystal growth and pharmaceutical industry |
| 28 | Polymorphism control and crystal growth. Disappearing polymorphs |
| 29 | Chirality control and crystal growth. Viedma ripening |
| 30 | Electrocrystallization |
| 31 | High-temperature methods of crystal growth |
| 32 | Crystal growth from the gas phase |
| 33 | Counterdiffusion and crystallization |
| 34 | Technical applications of small and large single crystals |
| 35 | Using large-scale facilities to study crystals |
| 36 | Crystals used as components of the instrumentation of the large-scale facilities |
| 37 | Crystal growth and cements |
| 38 | Giant crystals of Naica |
Figure 1Examples of crystals grown by different techniques: (a) potassium alum crystals grown by slow evaporation from aqueous solution using seed crystals; (b) a layered alum crystal [chrome alum core (inside) covered by potassium alum shell (outside)]; (c) a copper crystal grown by redox reaction between CuSO4 and Fe; (d) a high-pressure high-temperature modification of BaB4O7 synthesized using the ‘Discoverer-1500’ at 3 GPa, 1273 K; (e) an NaBa12(BO3)7F4 crystal grown from a high-temperature solution by top-seeded solution growth; (f) recrystallization of β-chlorpropamide (prismatic crystal) into γ-chlorpropamide (needles) in a diamond anvil cell at 0.1 GPa in a pentane–isopentane (1:1) mixture; (g) lysozyme crystals crystallized by the hanging-drop vapor diffusion antisolvent technique (viewed in polarized light); (h) plastic l-isoleucine single crystals grown inside a glass capillary by layering diffuse antisolvent crystallization (viewed in polarized light); (i) copper chloride dihydrate crystals grown by slow evaporation from a drop (viewed in polarized light). Photographs were taken by Dr E. Losev (a)–(c), (g)–(i), Dr Sci. T. Bekker (d), (e) and Dr Sci. B. Zakharov (f).
Figure 2Examples of the experimental setups for the laboratory experiments: (a) crystallization from aqueous solutions using seeds, (b) 24-well plate (Molecular Dimensions), (c) glass tubes for layering diffuse antisolvent crystallization, (d) crystallization mushroom (Triana Sci&Tech) (Garcia-Ruíz et al., 2002 ▸), (e) Mosquito Xtal3 robot for creating protein crystallization drop set, (f) vibrational ball mill (Narva, DDR), (g) ‘Discoverer-1500’ DIA-type apparatus at the Sobolev Institute of Geology and Mineralogy SB RAS in Novosibirsk, and (h) diamond anvil cell.
Figure 3Statistical information on the students who have taken the complete (lectures + practicals) course in the past three years. (a) The level of the students and (b) the specialities of the students