| Literature DB >> 36249063 |
Mary Jane Lim-Fat1, Maria Macdonald2, Sarah Lapointe3, Seth Andrew Climans2, Chantel Cacciotti4, Manik Chahal5, Sebastien Perreault6, Derek S Tsang7, Andrew Gao8, Stephen Yip9, Julia Keith10, Julie Bennett11, Vijay Ramaswamy11, Jay Detsky12, Uri Tabori11, Sunit Das13, Cynthia Hawkins14.
Abstract
The 2021 World Health Organization (WHO) classification of CNS tumors incorporates molecular signatures with histology and has highlighted differences across pediatric vs adult-type CNS tumors. However, adolescent and young adults (AYA; aged 15-39), can suffer from tumors across this spectrum and is a recognized orphan population that requires multidisciplinary, specialized care, and often through a transition phase. To advocate for a uniform testing strategy in AYAs, pediatric and adult specialists from neuro-oncology, radiation oncology, neuropathology, and neurosurgery helped develop this review and testing framework through the Canadian AYA Neuro-Oncology Consortium. We propose a comprehensive approach to molecular testing in this unique population, based on the recent tumor classification and within the clinical framework of the provincial health care systems in Canada. Contributions to the field: While there are guidelines for testing in adult and pediatric CNS tumor populations, there is no consensus testing for AYA patients whose care occur in both pediatric and adult hospitals. Our review of the literature and guideline adopts a resource-effective and clinically-oriented approach to improve diagnosis and prognostication of brain tumors in the AYA population, as part of a nation-wide initiative to improve care for AYA patients.Entities:
Keywords: AYA; CNS tumor classification; molecular testing; precision oncology; targeted therapy
Year: 2022 PMID: 36249063 PMCID: PMC9559579 DOI: 10.3389/fonc.2022.960509
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Recommended biomarkers for testing and their clinical implications in AYA glioma.
| Genes/Molecular profiles characteristically altered | Clinically relevant biomarkers (diagnostic, predictive or prognostic) | |
|---|---|---|
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| Astrocytoma, IDH-mutant | IDH1, IDH2, ATRX, TP53, CDKN2A/B | ATRX nuclear loss is diagnostic for astrocytic- lineage tumors in an IDH-mutant glioma |
| Oligodendroglioma, IDH-mutant, and 1p/19q-codeleted | IDH1, IDH2, 1p/19q, TERT promoter, CIC, FUBP1, NOTCH1 | 1p/19q codeletion distinguishes oligodendroglioma from astrocytoma, within IDH-mutant glioma |
| Glioblastoma, IDH-wildtype | IDH-wildtype, TERT promoter, chromosomes | IDH-wildtype, and one of: TERT promoter mutation; chromosome 7+/10-; or EGFR amplification, defines molecular GBM irrespective of histologic grade |
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| Low-grade glioma (IDH-wildtype) | BRAF, FGFR1, FGFR2, MYBL1, MYB, or other MAPK alterations, | In pediatric LGG, homozygous deletion in CDKN2A carry a worse prognosis. |
| High-grade glioma (hemispheric) | H3 G34R | In pediatric HGG, H3 G34R and H3 K27M alterations are diagnostic and confer a poor prognosis |
| High-grade glioma (IDH-wildtype and H3-wildtype) | BRAF V600E*, FGFR1*, MYBL*, MYB*, MYCN, PDGFRA, EGFR, p53, or other MAPK alterations, MLH1, MSH2, MSH6 and PMS | *Mutations in BRAF V600E, FGFR1, MYBL, MYB carry a better prognosis and are more common in low-grade glioma |
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| Dysembryoplastic neuroepithelial tumor, Ganglioglioma, Multinodular and vacuolating neuronal tumor, and others | FGFR1 in DNETs, | RAF/RAS/MAPK alterations can offer targeted therapy options |
Figure 1Testing algorithm for adolescent and young adult high grade gliomas. HGG, high grade gliomas; AYA, adolescent and young adults; IDH, isocitrate dehydrogenase; ATRX, ATRX chromatin remodeler; CDKN, cyclin-dependent kinase inhibitor; FISH, fluorescence in situ hybridization; SNP, single nucleotide polymorphism; WHO, World Health Organization; DMG, diffuse midline glioma; EGFR, epidermal growth factor receptor; RNA, ribonucleic acid; EZHIP, EZH Inhibitory Protein; MMR, mismatch repair; cMMRD, constitutional mismatch repair deficiency; BRAF, B-Raf; MYCN, N-myc proto oncogene; RTK, receptor tyrosine kinase; NTRK, neurotrophic tyrosine receptor kinase; TERT, telomerase reverse transcriptase.
Figure 2Testing algorithm for adolescent and young adult low grade gliomas. AYA, adolescent and young adults; LGG, low grade glioma; IDH, isocitrate dehydrogenase; ATRX, ATRX chromatin remodeler; CDKN, cyclin-dependent kinase inhibitor; WHO, World Health Organization; BRAF, B-Raf; FISH, fluorescence in situ hybridization; FGFR, fibroblast growth factor receptor; MYB, avian myelobalstosis viral oncogene; MYBL1, MYB Proto-Oncogene Like 1; MAPK, mitogen-activated protein kinase; PLGNT, pediatric low-grade neuroepithelial tumor; PXA, pleomorphic xanthoastrocytoma; EGFR, epidermal growth factor receptor; TERT, telomerase reverse transcriptase.
Figure 3Age at presentation and classification based on anatomic site, histology and molecular features of ependymomas (33, 34). ZFTA, zinc finger translocation associated; YAP1, yes-associated protein 1; posterior fossa type A (PFA) and posterior fossa type B (PFB) MYCN, N-myc proto oncogene.
Figure 4Testing algorithm for adolescent and young adult ependymomas. ZFTA, zinc finger translocation associated; YAP1, yes-associated protein 1; FISH, fluorescence in situ hybridization; RT-PCR, reverse transcriptase polymerase chain reaction; NGS, next generation sequencing; PFA, posterior fossa type (A) PFB, posterior fossa type (B) MYCN, N-myc proto oncogene; CDKN, cyclin-dependent kinase inhibitor; SNP, single nucleotide polymorphism.
Medulloblastoma subgroups with relevant clinical, molecular information and risk stratification.
| Subgroup | WNT-activated | SHH-activated (TP53 wildtype and mutated) | Group 3 | Group 4(non-WNT, non-SHH) |
|---|---|---|---|---|
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| Age at diagnosis | Child > 4 years old, adolescents and adults | Bimodal, most often occurring in infants and adults | Infants and young children | Childhood and adolescents |
| Anatomic location | Midline with involvement of brainstem or in cerebellar peduncle and cerebellopontine angle cistern | Cerebellar hemispheres | Midline vermian location adjacent to 4th ventricle | Midline vermian |
| Histology | Classic, rarely LCA | Desmoplastic/nodular, Classic, LCA | Classic, LCA | Classic, LCA |
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| Recurrent gene amplifications | MYCN* | MYC* | SNCAIP | |
| Recurrent single-nucleotide variants/mutations | CTNNB1 | PTCH1 | SMARCA4 | KDM6A |
| Cytogenetic events | Loss of chromosome 6* | Gain of chromosome 3q or 9p | Gain of chromosome 1q | Gain of chromosome 7, 18q |
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| Childhood | nuclear B-catenin accumulation# | TP53 mutations## | MYC amplification## | Chromosome 8 loss# |
| Adult | 10q, 3p, or 17p loss## | Isochromosome 17q## | Chromosome 8 loss # | |
LCA, Large cell anaplastic; *more likely to be associated with childhood medulloblastoma, **more likely to be associated with adult medulloblastoma, # associated with better prognosis, ## associated with inferior prognosis.