| Literature DB >> 36248993 |
Rachel C T Lam1, David Johnson2, Gigi Lam1, Michelle L Y Li1, Joyce W L Wong1, W K Jacky Lam3, K C Allen Chan3, Brigette Ma2.
Abstract
Advances in Next Generation Sequencing (NGS) technologies have enabled the accurate detection and quantification of circulating tumor-derived (ct)DNA in most gastrointestinal (GI) cancers. The prognostic and predictive utility of ctDNA in patiets with different stages of colorectal (CRC), gastro-esophageal (GEC) and pancreaticobiliary cancers (PBC) are currently under active investigation. The most mature clinical data to date are derived from studies in the prognostic utility of personalized ctDNA-based NGS assays in the detection of minimal residual disease (MRD) and early recurrence after surgery in CRC and other GI cancers. These findings are being validated in several prospective studies which are designed to test if ctDNA could outperform conventional approaches in guiding adjuvant chemotherapy, and in post-operative surveillance in some GI cancers. Several adaptive studies using ctDNA as a screening platform are also being used to identify patients with actionable genomic alterations for clinical trials of targeted therapies. In the palliative setting, ctDNA monitoring during treatment has shown promise in the detection and tracking of clonal variants associated with acquired resistance to targeted therapies and immune-checkpoint inhibitors (ICI). Moreover, ctDNA may help to guide the therapeutic re-challenge of targeted therapies in patients who have prior exposure to such treatment. This review will examine the most updated research findings on ctDNA as a biomarker in CRC, GEC and PBCs. It aims to provide insights into how the unique strengths of this biomarker could be optimally leveraged in improving the management of these GI cancers.Entities:
Keywords: ctDNA; gastrointestinal cancer; minimal residual disease; next generation sequencing; prognostic and predictive biomarker
Year: 2022 PMID: 36248993 PMCID: PMC9556664 DOI: 10.3389/fonc.2022.970242
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Figure 1The types of clinical settings where ctDNA is being investigated as a biomarker in guiding the management of some gastrointestinal cancers. Created with BioRender.com.
Figure 2Development of major clinical trials for ctDNA application in colorectal cancers.
Ongoing phase III or large observational studies or abstract-only reports on minimal residual disease.
| Study name & design. First author & reference | Study population | Sample size | Assay | Timepoints of ctDNA analysis | Primaryendpoint | Preliminary results reported in abstract form |
|---|---|---|---|---|---|---|
| TRACC (NCT04050345) | High risk stage II, stage III CRC | 107 | Tumor- informed Multiplex PCR (Signatera) | Before surgery or nCRT, <8 weeks and 3 months post-surgery. | 3-year DFS | -Baseline: 100/107 pts (93.4%) = ctDNA+ve |
| GALAXY study (UMIN000039205) | Stage II-III, resectable stage IV CRC | 1040 | Tumor- informed Multiplex PCR (Signatera) | Before surgery, 4,12,24,36,48,72,96 weeks post-surgery | DFS | -188/1040 pts (18%) MRD+ve at 4 weeks |
| VEGA study (jRCT1031200006) | ctDNA-ve pts at 4 weeks after surgery, high-risk stage II, low risk stage III CRC | 1240 | Natera, Inc, (bespoke, mPCR-NGS) | Postoperative week 4, then 3months after completing adjuvant chemo | DFS in ctDNA-ve pts randomized to surgery alone vs adjuvant CAPOX | Not available |
| ALTAIR study | Stage II-III or resectable Stage IV CRC who remain ctDNA+ve within 3 months after surgery and had adjuvant chemo | 240 | Tumor -informed Multiplex PCR (Signatera) | Postoperative and monthly up to 3 months | DFS in ctDNA+ve pts despite prior adjuvant chemo, randomized to trifluidine/tiparicil or placebo | Not available |
| DYNAMIC-III (ACTRN-12617001566325) | Stage III CRC | 1000 | Safe-SeqS | Week 5 to 6 postoperatively, then at end of adjuvant chemo | RFS for ctDNA +ve cohort and ctDNA-ve cohort, disease managed with escalated (if ctDNA +ve) de-escalated treatment (if ctDNA -ve) | Not available |
| DYNAMIC-RECTAL (ACTRN-12617001560381) | Locally advanced rectal cancer | 408 | Safe-SeqS | Week 4 and 7 post-op | RFS for ctDNA and pathology- guided treatment and standard of care | Not available |
| MEDOCC-CrEATE (NL6281/NTR6455) | Stage II colon cancer | 1320 | PGDx elio™ | Immediate post-operatively in intervention arm, end of trial in control arm | Proportion of pts receiving adjuvant chemo when ctDNA+ve after surgery | Not available |
| PRODIGE 70 CIRCULATE | Resected stage II colon cancer | 1980 | ddPCR (2 methylated markers WIF1 and NPY) | ≥ 2 weeks and <8 week postoperatively | ctDNA +ve cohort: 3-year DFS | Not available |
| COBRA (NCT0406810) | Resected stage IIA colon cancer | 1408 | Guardant Health LUNAR model | Post-operatively | Phase II subset: clearance of ctDNA for ctDNA+ve pts at baseline with/without adjuvant chemo ≤ 6 months from baseline. | Not available |
| PEGASUS (NCT04259944) | Resected T4N0 or stage III colon cancer | 140 | Guardant LUNAR-1™ | 2-4 weeks after surgery, then 3 monthly or after each treatment | Number of post-surgery and post-adjuvant chemo false-negative cases after a double ctDNA-negative detection | Not available |
| CIRCULATE AIO-KRK-0217 (NCT04089631) | Stage II colon cancer | 4812 | Not reported | ≤ 5 weeks postoperatively | ctDNA+ve: DFS in pts randomized to surgery alone or adjuvant chemo | Not available |
| BESPOKE (NCT04264702) | Stage I-IV colon cancer | 2000 | Tumor -informed Multiplex PCR (Signatera) | Serially sampling post operatively up to 2 years | Impact of ctDNA on adjuvant treatment decisions | Not available |
CRC, colorectal cancer; PCR, polymerase chain reaction; DFS, disease free survival; MRD, minimal residual disease; +, positive; -, negative; RFS, relapse or recurrence-free survival, ddPCR, digital droplet polymerase chain reaction; Pt, patients; nCRT, neoadjuvant chemoradiotherapy; chemo, chemotherapy.
Studies evaluating circulating tumor DNA as a screening tool to detect patients who could benefit from EGFR antibody re-challenge in metastatic colorectal cancer.
| Study name | Study design | Estimated sample size | Assessment method/Assay | Mutation analyzed | Primary outcome | Secondary outcome | Results (abstract only) |
|---|---|---|---|---|---|---|---|
| CHRONOS | Phase II RCT | 52 | ddPCR, NGS |
| ORR | PFS, OS, Toxicity | -36/52 pts (69%) negative for |
| RASINTRO | Prospective observational cohort | 73 | NGS |
| PFS | Tumor response, OS | Not available |
| FIRE-4 (NCT02934529) | Phase III RCT | 550 | Not available |
| OS | PFS, ORR, molecular biomarker | Not available |
| PULSE (NCT03992456) | Phase II RCT | 120 | NGS (Guardant 360) |
| OS | PFS, ORR, CBR | Not available |
| COLOMATE (NCT03765736) | Prospective observational cohort | 500 | NGS (Guardant 360) | RAS/ERBB2/BRAF | Proportion of patients with an actionable genomic profile | Not available | Not available |
RCT, randomised controlled trial; ddPCR, digital droplet polymerase chain reaction; NGS, next generation sequencing; ORR, overall response rate; PFS, progression free survival, OS, overall survival; CI, confidence interval; CBR, clinical benefit rate.