| Literature DB >> 36247767 |
Weixiong Zeng1, Wei Li2, Kaibin Huang3, Zhenzhou Lin3, Hui Dai4,5, Zilong He1, Renyi Liu1, Zhaodong Zeng1, Genggeng Qin1, Weiguo Chen1, Yongming Wu3.
Abstract
Purpose: To establish an ensemble machine learning (ML) model for predicting the risk of futile recanalization, malignant cerebral edema (MCE), and cerebral herniation (CH) in patients with acute ischemic stroke (AIS) who underwent mechanical thrombectomy (MT) and recanalization.Entities:
Keywords: acute ischemic stroke; cerebral herniation; futile recanalization; machine learning; malignant cerebral edema
Year: 2022 PMID: 36247767 PMCID: PMC9554641 DOI: 10.3389/fneur.2022.982783
Source DB: PubMed Journal: Front Neurol ISSN: 1664-2295 Impact factor: 4.086
Figure 1The inclusion and exclusion criteria.
Figure 2The model development pipeline. First, data were randomly divided into training and test sets without duplication. Next, using the training set, the five basic ML algorithms were internally trained, and their predictive ability was validated by applying a 10-fold cross-validation and hyperparameter optimization using the grid search method. Subsequently, the basic ML models were integrated into the LR-Stacking model, and the optimal model was evaluated in test set.
Summary of the important characteristics comparing AIS patients with futile recanalization vs. meaningful recanalization.
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| Patients | 49 (44.5%) | 61 (55.5%) | 110 | |
| Age | 56.04 ± 13.08 | 59.87 ± 11.98 | 58.16 ± 12.57 | 0.144 |
| NIHSS at admission | 11.73 (2–23) | 15.62 (3–28) | 13.89 (2–28) | 0.059 |
| GCS at admission | 12.67 (6–15) | 10.94 (3–15) | 11.71 (3–15) | 0.021* |
| DBP | 79.29 ± 16.07 | 80.95 ± 12.25 | 80.21 ± 14.04 | 0.284 |
| Blood glucose at admission | 6.44 (5.62–8.55) | 7.21 (6.50–8.82) | 7.11 (6.11–8.69) | 0.168 |
| TOAST-LAA | 19 | 23 | 42 | 0.354 |
| Hyperdensity proportion | < 0.001* | |||
| 0 | 32 | 23 | 55 | |
| 1 | 12 | 5 | 17 | |
| 2 | 5 | 17 | 22 | |
| 3 | 0 | 16 | 16 | |
| Hyperdensity volume | 0 (0–1.43) | 2.90 (0–13.19) | 0.20 (0–4.55) | < 0.001* |
| ASPECTS after embolectomy | 9.43 (7–10) | 8.38 (4–10) | 8.85 (4–10) | 0.029* |
| Hyperdensity in subarachnoid | 11 | 27 | 38 | 0.017* |
| Hyperdensity in anyposition | 23 | 43 | 66 | 0.012* |
| Maximum slice area of hyperdensity | 0 (0–95.48) | 260.98 (0–1097.02) | 15.26 (0–430.41) | < 0.001* |
| Hypodensity proportion | < 0.001* | |||
| 1 | 40 | 14 | 54 | |
| 2 | 4 | 16 | 20 | |
| 3 | 5 | 31 | 36 | |
| Hypodensity proportion > 2/3 | 5 | 31 | 36 | < 0.001* |
| Hypodensity proportion > 1/3 | 9 | 47 | 56 | < 0.001* |
| Hypodensity volume | 15.16 (5.21–31.98) | 97.81 (34.43–177.63) | 39.79 (12.67–127.83) | < 0.001* |
| D-dimer after embolectomy | 1.31 (0.78–2.57) | 3.18 (1.48–6.86) | 2.25 (1.02–5.52) | 0.004* |
mRS-90, 90-day modified Rankin Scale; NCCT, non-contrast computed tomography; ASPECTS, alberta stroke program early CT score.
*Significant difference between the two groups (p < 0.05).
The AUC, sensitivity, specificity, accuracy, and F1-score comparisons.
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| SVM | 0.882 (0.751, 1.000) | 0.882 (0.64, 0.99) | 0.875 (0.617, 0.985) | 0.879 (0.718, 0.966) | 0.879 |
| RFC | 0.897 (0.782, 1.000) | 0.882 (0.64, 0.99) | 0.813 (0.544, 0.960) | 0.849 (0.681, 0.949) | 0.857 |
| XGBoost | 0.879 (0.734, 1.000) | 0.882 (0.64, 0.99) | 0.875 (0.617, 0.985) | 0.879 (0.718, 0.966) | 0.882 |
| KNN | 0.927 (0.828, 1.000) | 0.882 (0.64, 0.99) | 0.875 (0.617, 0.985) | 0.879 (0.718, 0.966) | 0.879 |
| GBM | 0.875 (0.747, 1.000) | 0.882 (0.64, 0.99) | 0.813 (0.544, 0.960) | 0.849 (0.681, 0.949) | 0.848 |
| LR-stacking | 0.949 (0.882, 1.000) | 0.882 (0.64, 0.99) | 0.875 (0.617, 0.985) | 0.879 (0.718, 0.966) | 0.882 |
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| SVM | 0.826 (0.628, 1.000) | 0.700 (0.348, 0.933) | 0.826 (0.612, 0.951) | 0.788 (0.611, 0.910) | 0.756 |
| RFC | 0.883 (0.725, 1.000) | 0.900 (0.555, 0.998) | 0.870 (0.664, 0.972) | 0.879 (0.718, 0.966) | 0.864 |
| XGBoost | 0.867 (0.690, 1.000) | 0.800 (0.444, 0.975) | 0.913 (0.720, 0.989) | 0.879 (0.718, 0.966) | 0.856 |
| KNN | 0.857 (0.714, 0.999) | 0.800 (0.444, 0.975) | 0.870 (0.664, 0.972) | 0.849 (0.681, 0.949) | 0.825 |
| GBM | 0.848 (0.671, 1.000) | 0.500 (0.187, 0.813) | 0.870 (0.664, 0.972) | 0.758 (0.577, 0.889) | 0.694 |
| LR-stacking | 0.885 (0.738, 1.000) | 0.900 (0.555, 0.998) | 0.913 (0.720, 0.989) | 0.909 (0.757, 0.981) | 0.895 |
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| SVM | 0.890 (0.756, 1.000) | 0.571 (0.184, 0.901) | 0.962 (0.804, 0.999) | 0.879 (0.718, 0.966) | 0.796 |
| RFC | 0.940 (0.851, 1.000) | 0.714 (0.290, 0.963) | 0.962 (0.804, 0.999) | 0.909 (0.757, 0.981) | 0.856 |
| XGBoost | 0.857 (0.654, 1.000) | 0.571 (0.184, 0.901) | 0.923 (0.749, 0.991) | 0.849 (0.681, 0.949) | 0.761 |
| KNN | 0.915 (0.827, 1.000) | 0.857 (0.421, 0.996) | 0.885 (0.699, 0.976) | 0.879 (0.718, 0.966) | 0.835 |
| GBM | 0.890 (0.760, 1.000) | 0.714 (0.290, 0.963) | 0.885 (0.699, 0.976) | 0.849 (0.681, 0.949) | 0.784 |
| LR-Stacking | 0.904 (0.715, 1.000) | 0.857 (0.421, 0.996) | 0.962 (0.804, 0.999) | 0.939 (0.798, 0.993) | 0.909 |
AUC, area under the receiver operating characteristic curve; mRS-90, 90-day modified rankin scale; MCE, malignant cerebral edema; CH, cerebral herniation; SVM, support vector machine; RFC, random forest classifier; XGBoost, extreme gradient boosting; KNN, k-nearest neighbor; GBM, gradient-boosting machine; LR, logistics regression.
Figure 3The results from the ML models and contributions of various features to predicting futile recanalization. (A) The ROC curve of five ML models and LR-Stacking model. (B) The net benefit of the various models. (C) The features are listed in descending order according to the contributions from the LR-Stacking model. (D) The effects of the features on prediction. The colors indicate the value of each feature, from high (red) to low (blue). The horizontal location shows whether the effect of the value leads to a prediction of futile recanalization. Each point is a SHAP value of a feature for a case.
Figure 5The results of the ML models and contributions of various features to predicting CH. (A) The ROC curve of five ML models and LR-Stacking model. (B) The net benefit of the various models. (C) The importance of the features for the LR-Stacking model. (D) The effects of the features on the predictions of the LR-Stacking model.
The AUC, sensitivity, specificity, accuracy, and F1-score comparisons of generalized LR and LR-Stacking method.
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| LR | 0.908 (0.7914, 1.0000) | 0.882 (0.6356, 0.9854) | 0.875 (0.6165, 0.9845) | 0.879 (0.7180, 0.9660) | 0.879 | 0.324 |
| LR-stacking | 0.949 (0.882, 1.000) | 0.882 (0.64, 0.99) | 0.875 (0.617, 0.985) | 0.879 (0.718, 0.966) | 0.882 | |
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| LR | 0.852 (0.6551, 1.0000) | 0.900 (0.5550, 0.9975) | 0.870 (0.6641, 0.9722) | 0.879 (0.7180, 0.9660) | 0.864 | 0.395 |
| LR-stacking | 0.885 (0.738, 1.000) | 0.900 (0.555, 0.998) | 0.913 (0.720, 0.989) | 0.909 (0.757, 0.981) | 0.895 | |
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| LR | 0.929 (0.8263, 1.0000) | 0.714 (0.2904, 0.9633) | 0.923 (0.7487, 0.9905) | 0.879 (0.7180, 0.9660) | 0.819 | 0.739 |
| LR-stacking | 0.904 (0.715, 1.000) | 0.857 (0.421, 0.996) | 0.962 (0.804, 0.999) | 0.939 (0.798, 0.993) | 0.909 | |
The AUCs of three groups of models were compared by Delong test.
AUC, area under the receiver operating characteristic curve; mRS-90, 90-day modified Rankin Scale; MCE, malignant cerebral edema; CH, cerebral herniation; LR, logistics regression.
Figure 6The force plot for the LR-Stacking model decision process for evaluating the risk of futile recanalization, MCE, and CH in two patients with AIS in the test set. (A) A patient with mRS-90 of 5, indicating futile recanalization and developed MCE and CH. (B) A patient with mRS-90 of 2, indicating meaningful recanalization and did not develop MCE or CH. Each feature provides a SHAP value for the base value of the model. The final prediction value, f(x), is obtained using to the weight of the features and the model processing. When f(x) > 0, the model determines that the case is positive; otherwise, it is considered negative.