| Literature DB >> 36233556 |
Yirui Hu1, Kunpeng Liu2, Kevin Ho3, David Riviello4, Jason Brown5, Alex R Chang6, Gurmukteshwar Singh6, H Lester Kirchner1.
Abstract
BACKGROUND: Hospitalization-associated acute kidney injury (AKI), affecting one-in-five inpatients, is associated with increased mortality and major adverse cardiac/kidney endpoints. Early AKI risk stratification may enable closer monitoring and prevention. Given the complexity and resource utilization of existing machine learning models, we aimed to develop a simpler prediction model.Entities:
Keywords: AKI; acute kidney injury; early detection; hospitalization-acquired acute kidney injury; machine learning; model; prediction; predictive modeling
Year: 2022 PMID: 36233556 PMCID: PMC9573390 DOI: 10.3390/jcm11195688
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.964
Descending hierarchy to determine baseline creatinine. Rules in order of preference, 1 through 5.
| Rule | Creatinine Available Prior to Admission | Baseline Creatinine |
|---|---|---|
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| 3 or more outpatient values available in 14–365 days prior to admission (PTA) | Mean of all outpatient values |
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| 2 outpatient values available in 14–365 days PTA + some prior inpatient values | Mean of 2 outpatient and lowest inpatient value |
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| 1 or fewer outpatient creatinine values in 14–365 days PTA but outpatient values available within 18 months PTA | Mean of all outpatient values |
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| No outpatient creatinine values in 18 months PTA but patient had prior inpatient admissions | Mean of 3 lowest inpatient values |
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| No prior inpatient or outpatient creatinine available | Creatinine at admission |
Characteristics of patients who developed AKI compared to those who did not.
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| Age, mean (SD) | 70.10 (15.5) | 63.25 (19.0) | <0.001 |
| Male gender, | 13,746 (52.2) | 79,178 (43.4) | <0.001 |
| Body mass index, mean (SD) | 31.38 (8.7) | 30.51 (8.3) | <0.001 |
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| Atrial fibrillation, | 6745 (25.6) | 28,225 (15.5) | <0.001 |
| Coronary artery disease, | 8940 (33.9) | 40,102 (22.0) | <0.001 |
| Cancer, | 3974 (15.1) | 22,808 (12.5) | <0.001 |
| Congestive Heart Failure, | 9048 (34.3) | 29,707 (16.3) | <0.001 |
| Chronic Kidney Disease, | 10,061 (38.2) | 31,561 (17.3) | <0.001 |
| Obstructive Lung Disease, | 5645 (21.4) | 31,688 (17.3) | <0.001 |
| Diabetes Mellitus, | 10,990 (41.7) | 47,212 (25.8) | <0.001 |
| Gastrointestinal Bleed, | 3007 (11.4) | 14,666 (8.0) | <0.001 |
| Hypertension, | 17,303 (65.7) | 91,761 (50.2) | <0.001 |
| Peripheral vascular disease, | 4042 (15.3) | 17,206 (9.4) | <0.001 |
| Respiratory failure, | 3749 (14.2) | 16,746 (9.2) | <0.001 |
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| ACE/ARB, | 7177 (27.2) | 44,061 (24.1) | <0.001 |
| Antianginal medications, | 8470 (32.2) | 38,972 (21.3) | <0.001 |
| Anticoagulants, | 9692 (36.8) | 59,381 (32.5) | <0.001 |
| Diuretics, | 14,345 (54.5) | 54,681 (29.9) | <0.001 |
| Lipid lowering medication, | 12,470 (47.3) | 71,550 (39.2) | <0.001 |
| Nephrotoxic antibiotics, | 3215 (12.2) | 18,232 (10.0) | <0.001 |
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| Serum albumin, g/dL | 3.21 (0.7) | 3.54 (0.6) | <0.001 |
| Total Bilirubin, mg/dL | 1.2 (2.7) | 0.8 (1.3) | <0.001 |
| Blood urea nitrogen, mg/dL | 40.9 (25.5) | 19.2 (12.3) | <0.001 |
| Serum creatinine, mg/dL | 2.1 (1.4) | 1.0 (0.5) | <0.001 |
| Blood glucose, mg/dL | 140 (63.3) | 131 (53.6) | <0.001 |
| Hemoglobin, g/dL | 10.6 (2.1) | 11.5 (2.1) | <0.001 |
| Prothrombin time, INR | 1.8 (1.1) | 1.5 (0.8) | <0.001 |
| Leukocyte count, ×1000/mL | 11.2 (10.8) | 9.9 (6.6) | <0.001 |
AKI: Acute Kidney Injury, ACE: Angiotensin Converting Enzyme Inhibitor, ARB: Angiotensin Receptor Blocker, INR: International Normalized Ratio.
Top 15 variables in each algorithm.
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| eGFR * | eGFR * | |
| Mean arterial pressure * | Mean arterial pressure * | |
| Serum albumin | ||
| Calcium channel blocker | ||
| Vasodilator therapy | Body Mass Index * | White Blood Cell * |
| Hypercalcemia * | Prothrombin time (INR) * | |
| NSAID use | Hemoglobin * | Serum sodium |
| Steroid use | Platelet count * | Platelet count * |
| White Blood Cell * | Hemoglobin * | |
| Respiratory failure * | Prothrombin time (INR) * | |
| Serum potassium | Body Mass Index * | |
| Nephrotoxic antibiotics * | ||
| Cancer | Hypertension | Hypercalcemia * |
| Anticoagulants | Congestive Heart Failure | Respiratory failure * |
* Variable represented in 2 algorithms. ** Variable represented in all 3 algorithms. CKD: Chronic Kidney Disease, eGFR: Estimated Glomerular Filtration Rate, NSAID: Nonsteroidal Anti-inflammatory Drugs, INR: International Normalized Ratio
Figure 1Performance evaluation for LASSO (a) Receiver Operating Characteristic (ROC) curve; (b) Precision-Recall (PR) curve. AUC: Area under the curve.
Figure 2Performance evaluation for Random Forest (a) ROC curve; (b) Precision-Recall curve.
Figure 3Performance evaluation for Gradient Boosting Machines (a) ROC curve; (b) Precision-Recall curve.
Sensitivity, specificity, and NPV by varying cut-off in Lasso, Random Forest and Gradient Boosting Machines.
| LASSO | |||
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| Cut-Off | Sensitivity | Specificity | NPV |
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| 0.96 | 0.29 | 0.98 |
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| 0.91 | 0.51 | 0.98 |
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| 0.84 | 0.68 | 0.97 |
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| 0.76 | 0.80 | 0.96 |
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| 0.29 | 0.98 | 0.91 |
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| 0.92 | 0.48 | 0.98 |
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| 0.86 | 0.69 | 0.97 |
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| 0.73 | 0.85 | 0.96 |
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| 0.41 | 0.97 | 0.92 |
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| 0.90 | 0.59 | 0.98 |
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| 0.81 | 0.77 | 0.97 |
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| 0.67 | 0.89 | 0.95 |
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| 0.41 | 0.97 | 0.92 |
Metrics with cut-off probabilities above 0.50 are not listed as the sensitivity drops to a very low level. NPV: Negative Predictive Value.