| Literature DB >> 36230917 |
Eugenio Hardy1, Carlos Fernandez-Patron2.
Abstract
Endogenous glucocorticoids and their synthetic analogues, such as dexamethasone, stimulate receptor-mediated signal transduction mechanisms on target cells. Some of these mechanisms result in beneficial outcomes whereas others are deleterious in the settings of pathogen infections and immunological disorders. Here, we review recent studies by several groups, including our group, showing that glucocorticoids can directly interact with protein components on SARS-CoV-2, the causative agent of COVID-19. We postulate an antiviral defence mechanism by which endogenous glucocorticoids (e.g., cortisol produced in response to SARS-CoV-2 infection) can bind to multiple sites on SARS-CoV-2 surface protein, Spike, inducing conformational alterations in Spike subunit 1 (S1) that inhibit SARS-CoV-2 interaction with the host SARS-CoV-2 receptor, ACE2. We suggest that glucocorticoids-mediated inhibition of S1 interaction with ACE2 may, consequently, affect SARS-CoV-2 infectivity. Further, glucocorticoids interactions with Spike could protect against a broad spectrum of coronaviruses and their variants that utilize Spike for infection of the host. These notions may be useful for the design of new antivirals for coronavirus diseases.Entities:
Keywords: ACE2 (angiotensin converting enzyme 2); COVID-19; SARS-CoV-2; cortisol; dexamethasone; glucocorticoids; innate immunity; spike protein
Mesh:
Substances:
Year: 2022 PMID: 36230917 PMCID: PMC9562004 DOI: 10.3390/cells11192955
Source DB: PubMed Journal: Cells ISSN: 2073-4409 Impact factor: 7.666
Summary of Results (from [13]) Showing that Glucocorticoids Bind to SARS-CoV-2 S1 and Block S1/ACE2 Interaction.
| Row | Method(s) | Authors’ Main Results and Conclusions |
|---|---|---|
| 1 | Fpocket algorithm; Molecular docking using AutoDockVina and AutoDockTools; Molecular dynamics using GPU-accelerated AMBER, PyRED server, SHAKE algorithm, VMD, Ligplot, and PyMOL; Binding energy calculations, based on MM/GBSA | (i) In silico identification of 52 unique pockets, with high affinity for cortisol and dexamethasone, which are located and distributed on the RBD, NTD, RBD-RBD interface and NTD-RBD interface. |
| 2 | Limited proteolysis-coupled LC-MS (and methods in Row 1) | (i) Confirmation of several cortisol-binding pockets (e.g., HCY_8, HCY_29, HCY35, HCY 59, HCY_88, HCY_112, HCY_153, HCY_161), and identification of their amino acid sequences. |
| 3 | Cortisol-Acetylcholinesterase conjugate assay, using Cortisol Express ELISA kit (Cayman Chemicals, Ann Arbor, MI, USA); Protein thermal stability assays; GloMelt™ Thermal Shift Protein Stability Kit (Biotium, Fremont, CA, USA); Thermal stability of SARS-CoV-2 S1 assisted by detection with SDS-PAGE; ACE2 Activity Assay Kit (Fluorometric) (Abcam, Cambridge, UK) | (i) Biochemical confirmation that cortisol directly binds to S1. |
| 4 | SARS-CoV-2 S1 Protein-ACE2 Binding Inhibitor Screening Kit (BioVision, Milpitas, CA, USA) | (i) Combined dexamethasone and cortisol can inhibit the S1-ACE2 interaction more than each individual glucocorticoid alone. For instance, at 1 nM, cortisol and dexamethasone cooperatively reduce S1 binding to ACE2, to levels comparable to 100 nM cortisol or 100 nM S1 polyclonal antibodies. Ten nM dexamethasone + 1 nM cortisol reduces S1/ACE2 binding from 100% to 33% (~77% reduction). At concentrations above 100 nM, the combination of dexamethasone and cortisol does not produce any difference in inhibition compared to dexamethasone or cortisol alone at the same concentrations. |
SARS-CoV-2: severe acute respiratory syndrome coronavirus 2; S: spike; GPUs: graphics processing unit; AMBER: accelerated assisted model building with energy refinement; VMD: visual molecular dynamics; MM/GBSA: molecular mechanics generalized Born surface area; RBD: receptor-binding domain; NTD: N-terminal domain; LC-MS: liquid chromatography-mass spectrometry; HCY: cortisol; ACE2: angiotensin converting enzyme-2; SDS-PAGE: sodium dodecyl sulfate-polyacrylamide gel electrophoresis.
Figure 1Schematic overview of the proposed innate immune mechanism (non-specific and non-genomic) by which glucocorticoids may reduce SARS-CoV-2 infectivity. Constitutive secretion of glucocorticoids downstream of the hypothalamic-pituitary-adrenal glands axis contributes to a baseline pool of glucocorticoids that may be available to interact with SARS-CoV-2 Spike 1 immediately after viral invasion. Direct binding of glucocorticoids to SARS-CoV-2 S1 results in altered (possibly locked) conformational states of the Spike protein. This mechanism could inhibit SARS-CoV-2 interaction with its main receptor in humans, ACE2. Under normal conditions, the constitutive secretion of glucocorticoids by the hypothalamic-pituitary-adrenal axis is regulated by end-product feedback inhibition, which limits the defensive potential of this constitutive innate immune response mechanism. However, SARS-CoV-2 infection itself is a stimulus for the hypothalamic-pituitary-adrenal axis leading to enhanced secretion of glucocorticoids from the adrenal cortex. As the secreted pool of glucocorticoids available for inhibition of S1 interaction with ACE2 increases, the antiviral defence potential of this viral induced innate immune mechanism may increase significantly. Note: Illustration of a complex of the S protein colored in red and magenta linked to ACE2 receptor colored in blue (https://cdn.rcsb.org/pdb101/motm/246/246-Coronavirus_Spike-6vsb_6m17_2.tif) was obtained from David Goodsell (https://doi.org/10.2210/rcsb_pdb/mom_2020_6), licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/). The original illustration was created using PDB entries 6vxx [29], 6m17 [30], and 6vsb [31].