| Literature DB >> 36224308 |
Xuandong Jiang1, Yongxia Hu2, Shan Guo2, Chaojian Du2, Xuping Cheng2.
Abstract
Acute kidney injury (AKI) often occurs in patients in the intensive care unit (ICU). AKI duration is closely related to the prognosis of critically ill patients. Identifying the disease course length in AKI is critical for developing effective individualised treatment. To predict persistent AKI at an early stage based on a machine learning algorithm and integrated models. Overall, 955 patients admitted to the ICU after surgery complicated by AKI were retrospectively evaluated. The occurrence of persistent AKI was predicted using three machine learning methods: a support vector machine (SVM), decision tree, and extreme gradient boosting and with an integrated model. External validation was also performed. The incidence of persistent AKI was 39.4-45.1%. In the internal validation, SVM exhibited the highest area under the receiver operating characteristic curve (AUC) value, followed by the integrated model. In the external validation, the AUC values of the SVM and integrated models were 0.69 and 0.68, respectively, and the model calibration chart revealed that all models had good performance. Critically ill patients with AKI after surgery had high incidence of persistent AKI. Our machine learning model could effectively predict the occurrence of persistent AKI at an early stage.Entities:
Mesh:
Year: 2022 PMID: 36224308 PMCID: PMC9556643 DOI: 10.1038/s41598-022-21428-5
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.996
Figure 1Flow chart of the study. ICU, intensive care unit; AKI, acute kidney injury.
Comparison of feature distributions between the training, internal validation, and external validation sets.
| Variables | Training ( | Internal validation ( | External validation ( | |
|---|---|---|---|---|
| Age (years), mean (SD) | 63.5 ± 17 | 62.7 ± 16.6 | 64 ± 17.3 | 0.425 |
| Male, | 437 (65.2) | 191 (67) | 1882 (59.4) | 0.002 |
| SOFA (score), mean (SD) | 7 ± 3.4 | 6.9 ± 3.5 | 5.1 ± 3 | < 0.001 |
| RRT, | 52 (7.8) | 17 (6) | 100 (3.2) | < 0.001 |
| Uo_6h (mL/kg/h), mean (SD) | 0.2 ± 0.3 | 0.2 ± 0.3 | 0.3 ± 0.3 | < 0.001 |
| Uo_24h (mL/kg/h) | 1.15 (0.73, 1.66) | 1.25 (0.82, 1.85) | 0.63 (0.43, 0.92) | < 0.001 |
| Hypertension | 303 (45.2) | 126 (44.2) | 1589 (50.1) | 0.018 |
| Diabetes | 87 (13) | 38 (13.3) | 766 (24.2) | < 0.001 |
| Creatinine (mmol/L) | 107.1 ± 60.5 | 103.4 ± 58.5 | 83 ± 41.9 | < 0.001 |
| White blood cell (× 109/L) | 12.3 ± 6.4 | 12.8 ± 7 | 12.9 ± 6.1 | 0.072 |
| pH | 7.4 ± 0.1 | 7.4 ± 0.1 | 7.4 ± 0.1 | 0.542 |
| Bicarbonate (mmol/L) | 20.9 ± 3.8 | 20.7 ± 3.7 | 22.8 ± 3.7 | < 0.001 |
| Lactate (mmol/L) | 3.4 ± 3.3 | 3.2 ± 3.1 | 2.7 ± 2 | < 0.001 |
| Urea (mmol/L) | 9.2 ± 4.7 | 9.2 ± 4.5 | 18.3 ± 10.4 | < 0.001 |
| Maximum glucose (mmol/L) | 11.7 ± 5.1 | 11.5 ± 4.6 | 190.7 ± 65.7 | < 0.001 |
| Mean systolic pressure (mmHg) | 125.3 ± 17 | 125.1 ± 16.7 | 117.8 ± 14.8 | < 0.001 |
| Mean temperature (°C) | 37.2 ± 0.7 | 37.2 ± 0.7 | 37 ± 0.6 | < 0.001 |
| Mean heart rate (bpm) | 89.5 ± 18.6 | 90.4 ± 19.8 | 87.9 ± 14.8 | 0.004 |
| Persistent AKI, | 264 (39.4) | 112 (39.3) | 1429 (45.1) | 0.008 |
| ICU length of stay (days), median (IQR) | 2.19 (0.73, 8.5) | 1.86 (0.55, 7.82) | 4.37 (2.97, 8.91) | < 0.001 |
| Hosp. LOS (days), median (IQR) | 22 (14, 33) | 21 (14, 32) | 11.08 (7.17, 17.88) | < 0.001 |
| Hospital mortality, | 114 (17) | 57 (20) | 348 (11) | < 0.001 |
SOFA, Sepsis-related Organ Failure Assessment; RRT, renal replacement therapy; Uo_6h, urine volume for 6 h on ICU admission; Uo_24h, urine volume for 24 h on ICU admission; ICU, intensive care unit; AKI, acute kidney injury; Hosp. LOS, length of hospital stay.
Comparisons of baseline characteristics and outcomes between patients with persistent and transient AKI.
| Variables | Total ( | Transient AKI ( | Persistent AKI ( | |
|---|---|---|---|---|
| Age (years), mean (SD) | 63.3 ± 16.9 | 63.2 ± 17 | 63.5 ± 16.7 | 0.793 |
| Male, | 628 (65.8) | 381 (65.8) | 247 (65.7) | 1 |
| Smoking, | 384 (40.2) | 233 (40.2) | 151 (40.2) | 1 |
| Alcohol drinking, | 375 (39.3) | 233 (40.2) | 142 (37.8) | 0.485 |
| SOFA (score), mean (SD) | 6.9 ± 3.4 | 6.4 ± 3.2 | 7.8 ± 3.6 | < 0.001 |
| APACHE II (score), mean (SD) | 19.3 ± 7.2 | 18.6 ± 6.7 | 20.3 ± 7.8 | < 0.001 |
| Surgery time (hours), mean (SD) | 3.1 ± 2.3 | 3 ± 2 | 3.2 ± 2.6 | 0.276 |
| < 0.001 | ||||
| Abdominal | 242 (25.3) | 169 (29.2) | 73 (19.4) | |
| Cerebral | 172 (18) | 84 (14.5) | 88 (23.4) | |
| Orthopaedic | 240 (25.1) | 143 (24.7) | 97 (25.8) | |
| Cardiothoracic | 105 (11) | 81 (14) | 24 (6.4) | |
| Others | 196 (20.5) | 102 (17.6) | 94 (25) | |
| Contrast agent use, | 624 (65.3) | 361 (62.3) | 263 (69.9) | 0.019 |
| Antibiotic use, | 43 (4.5) | 14 (2.4) | 29 (7.7) | < 0.001 |
| Diuretic use, | 778 (81.5) | 445 (76.9) | 333 (88.6) | < 0.001 |
| < 0.001 | ||||
| 1 | 588 (61.6) | 424 (73.7) | 161 (42.8) | |
| 2 | 229 (24) | 124 (21.4) | 105 (27.9) | |
| 3 | 138 (14.5) | 28 (4.8) | 110 (29.3) | |
| Uo_6h (mL), mean (SD) | 324.8 ± 455.5 | 239.2 ± 400.5 | 456.7 ± 501.9 | < 0.001 |
| Uo_24h (mL), median (IQR) | 1735 (1100, 2400) | 1700 (1150, 2350) | 1787.5 (1000, 2556.25) | 0.792 |
| Hypertension | 429 (44.9) | 245 (42.3) | 184 (48.9) | 0.052 |
| Diabetes | 125 (13.1) | 56 (9.7) | 69 (18.4) | < 0.001 |
| Myocardial infarction, | 87 (9.1) | 32 (5.5) | 55 (14.6) | < 0.001 |
| Chronic obstructive pulmonary disease | 74 (7.7) | 45 (7.8) | 29 (7.7) | 1 |
| Solid tumour | 110 (11.5) | 79 (13.6) | 31 (8.2) | 0.014 |
| Sepsis | 550 (57.6) | 337 (58.2) | 213 (56.6) | 0.683 |
| Creatinine (mmol/L) | 106 ± 59.9 | 83.4 ± 32.4 | 140.8 ± 74.2 | < 0.001 |
| Urea (mmol/L) | 9.2 ± 4.6 | 8.1 ± 3.5 | 10.9 ± 5.5 | < 0.001 |
| White blood cell (× 109/L) | 12.5 ± 6.6 | 12 ± 6 | 13.1 ± 7.4 | 0.016 |
| Red blood cell (× 109/L) | 3.6 ± 0.8 | 3.6 ± 0.7 | 3.5 ± 0.9 | 0.024 |
| Platelet count (× 109/L) | 151.4 ± 78.2 | 157.5 ± 79.8 | 142 ± 74.7 | 0.002 |
| pH | 7.4 ± 0.1 | 7.4 ± 0.1 | 7.3 ± 0.1 | < 0.001 |
| Bicarbonate (mmol/L) | 20.9 ± 3.8 | 21.6 ± 3.1 | 19.7 ± 4.4 | < 0.001 |
| Lactate (mmol/L) | 3.4 ± 3.2 | 2.7 ± 2.3 | 4.4 ± 4.1 | < 0.001 |
| Prothrombin time (s) | 16.4 ± 6.2 | 15.6 ± 2.7 | 17.7 ± 9.2 | < 0.001 |
| Potassium (mmol/L) | 4.2 ± 0.7 | 4.1 ± 0.6 | 4.3 ± 0.8 | 0.012 |
| Sodium (mmol/L) | 141.1 ± 4.9 | 140.7 ± 4.5 | 141.8 ± 5.5 | 0.002 |
| Minimum glucose (mmol/L) | 6.6 ± 1.8 | 6.5 ± 1.6 | 6.9 ± 2 | 0.006 |
| Maximum glucose (mmol/l) | 11.6 ± 4.9 | 10.8 ± 3.6 | 13 ± 6.3 | < 0.001 |
| Mean glucose (mmol/l) | 8.9 ± 2.4 | 8.4 ± 2 | 9.6 ± 2.9 | < 0.001 |
| Minimum systolic pressure (mmHg) | 92.9 ± 19.7 | 96.3 ± 19.1 | 87.8 ± 19.6 | < 0.001 |
| Maximum systolic pressure (mmHg) | 179.2 ± 126.9 | 186.9 ± 151 | 167.4 ± 75 | 0.008 |
| Mean systolic pressure (mmHg) | 125.3 ± 16.9 | 127.8 ± 16.6 | 121.4 ± 16.8 | < 0.001 |
| Minimum diastolic pressure (mmHg) | 49.9 ± 10.1 | 51.2 ± 9.8 | 47.9 ± 10.2 | < 0.001 |
| Maximum diastolic pressure (mmHg) | 91.8 ± 43.5 | 90.4 ± 34.6 | 94 ± 54.4 | 0.244 |
| Mean diastolic pressure (mmHg) | 66.6 ± 9.8 | 67.1 ± 9.6 | 65.9 ± 10.1 | 0.088 |
| Mean temperature (°C) | 37.2 ± 0.7 | 37.2 ± 0.6 | 37.1 ± 0.8 | < 0.001 |
| Minimum temperature (°C) | 36.1 ± 0.9 | 36.2 ± 0.8 | 35.9 ± 1.1 | < 0.001 |
| Maximum temperature (°C) | 38.1 ± 0.8 | 38.1 ± 0.7 | 38 ± 0.9 | 0.552 |
| Mean heart rate (bpm) | 89.8 ± 19 | 86.5 ± 17 | 94.9 ± 20.7 | < 0.001 |
| Minimum heart rate (bpm) | 69.6 ± 18.2 | 67.5 ± 15.9 | 72.8 ± 20.9 | < 0.001 |
| Maximum heart rate (bpm) | 115.8 ± 27.2 | 111.7 ± 25.7 | 122 ± 28.2 | < 0.001 |
| ICU length of stay (days), median (IQR) | 5.97 (3.67, 12.67) | 5.23 (3.12, 11.63) | 7.36 (4.51, 13.92) | < 0.001 |
| Ventilation duration (days), median (IQR) | 2.16 (0.7, 8.44) | 1.65 (0.56, 7.74) | 3.32 (0.81, 9.38) | 0.002 |
| Hosp. LOS (days), median (IQR) | 22 (14, 33) | 22 (14.5, 33) | 22 (13, 33) | 0.497 |
| Cost (× 103 yuan) | 71.63 (46.73, 108.8) | 64.18 (44.23, 94.55) | 83.16 (52.1, 139.01) | < 0.001 |
| Hospital mortality, | 171 (17.9) | 57 (9.8) | 114 (30.3) | < 0.001 |
AKI, acute kidney injury; SOFA, Sepsis-related Organ Failure Assessment; APACHE, Acute Physiology and Chronic Health Evaluation; Uo_6h, urine volume for 6 h on ICU admission; Uo_24h, urine volume for 24 h on ICU admission; ICU, intensive care unit; Hosp. LOS, length of hospital stay.
Figure 2The relative influence of each machine-learning model in the stacked-ensemble model. SVM, support vector machine; XGBoost, extreme gradient boosting.
Figure 3Evaluation of model performance in the internal validation dataset. (A) The calibration plot shows the consistency between observed and predicted risks for persistent acute kidney injury. (B) Discrimination of the machine-learning models in the internal validation dataset. SVM, support vector machine; XGBoost, extreme gradient boosting; AUC, area under the curve. The number in parentheses indicates the 95% confidence interval.
Figure 4Variable-importance ranking in the gradient-boosting machine. RRT, renal replacement therapy; SOFA, Sepsis-related Organ Failure Assessment; Uo_24h, urine volume for 24 h on ICU admission.
Figure 5Heatmap plot showing the contribution of each variable to the classification of the sample patients. The relative contribution of each variable was calculated using the LIME algorithm. Data of patients 2 and 3 are shown as examples. The red colour indicates that the relevant variable contradicts a given label, while the blue colour indicates support. AKI, acute kidney injury; SOFA, Sepsis-related Organ Failure Assessment; Uo_24h, Urine volume for 24 h on intensive care unit admission; LIME, Local Interpretable Model-Agnostic Explanations.
Figure 6The LIME feature plot shows the contribution of each variable to the classification of the sample patients. The red colour indicates that the relevant variable contradicts a given label, while the blue colour indicates support. AKI, acute kidney injury; SOFA, Sepsis-related Organ Failure Assessment; Uo_24h, Urine volume for 24 h on intensive care unit admission; LIME, Local Interpretable Model-Agnostic Explanations.