Literature DB >> 36223373

Using ISARIC 4C mortality score to predict dynamic changes in mortality risk in COVID-19 patients during hospital admission.

Tim Crocker-Buque1, Jonathan Myles2, Adam Brentnall2, Rhian Gabe2, Stephen Duffy2, Sophie Williams1, Simon Tiberi1,3.   

Abstract

As SARS-CoV-2 infections continue to cause hospital admissions around the world, there is a continued need to accurately assess those at highest risk of death to guide resource use and clinical management. The ISARIC 4C mortality score provides mortality risk prediction at admission to hospital based on demographic and physiological parameters. Here we evaluate dynamic use of the 4C score at different points following admission. Score components were extracted for 6,373 patients admitted to Barts Health NHS Trust hospitals between 1st August 2020 and 19th July 2021 and total score calculated every 48 hours for 28 days. Area under the receiver operating characteristic (AUC) statistics were used to evaluate discrimination of the score at admission and subsequent inpatient days. Patients who were still in hospital at day 6 were more likely to die if they had a higher score at day 6 than others also still in hospital who had the same score at admission. Discrimination of dynamic scoring in those still in hospital was superior with the area under the curve 0.71 (95% CI 0.69-0.74) at admission and 0.82 (0.80-0.85) by day 8. Clinically useful changes in the dynamic parts of the score are unlikely to be associated with subject-level measurements. Dynamic use of the ISARIC 4C score is likely to provide accurate and timely information on mortality risk during a patient's hospital admission.

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Year:  2022        PMID: 36223373      PMCID: PMC9555674          DOI: 10.1371/journal.pone.0274158

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.752


Introduction

The global pandemic caused by severe acute respiratory coronavirus 2 (SARS-CoV-2) infection and resulting COVID-19 disease continues, including in the UK, where an average of around 1,000 patients per day were admitted with COVID-19 during August and September 2021, with many more seen and discharged from emergency departments [1]. The mean length of admission resulting for a COVID-19 infection in the UK National Health Service (NHS) is 8–9 days (compared to 1 day for an acute medical admission), during which time patients may deteriorate to require critical care, resulting in a longer admission (15–16 days), while others will improve and be discharged [2]. This combination is likely to put increasing pressure on health services through winter months particularly as population based public health measures are reduced [3]. The ISARIC 4C mortality score provides an indication of mortality risk at admission based on demographic and physiological parameters, derived from a national level population cohort study in the UK [4,5]. Components and score weights are shown in Table 1. Total scores were grouped into low risk (score 0–3, mortality rate 1.2%), intermediate risk (score 4–8, 9.9% mortality), high risk (score 9–14, 31.4% mortality), and very high risk (score ≥15, mortality 61.5%).
Table 1

Demographic and clinical components of the ISARIC 4C COVID-19 mortality score and associated score weights.

VariableScore
Age (years)<50-
50–59+2
60–69+4
70–79+6
≥80+7
Sex at birthFemale-
Male+1
Number of co-morbidities*0-
1+1
≥2+2
Respiratory rate (breaths per minute)<20-
20–29+1
≥30+2
Peripheral oxygen saturation on room air (%)≥92-
<92+2
Glasgow coma scale score15-
<15+2
Urea (mmol/L)<7-
7–14+1
>14+3
C-reactive protein (mg/L)<50-
50–99+1
≥100+2

*As defined by the Charlson comorbidity index, with the addition of clinician defined obesity.

*As defined by the Charlson comorbidity index, with the addition of clinician defined obesity. The score provides useful, early information enabling clinicians to make decisions around treatment requirements and safe discharge. Barts Health National Health Service Trust (BHNHST) provides health services through 5 hospital sites across east London to a demographically and socio-economically diverse population of more than 2.5 million people, and we have previously evaluated the score in our local population [6]. However, although the score provides useful information on admission, there is a need to better understand how a patient’s risk evolves during a hospital stay to support health services planning. We also sought to identify whether there was a point during patients with long admissions where repeating the scoring would be clinically useful, as currently it is only validated for use at admission to hospital. Therefore, our aim was to study the dynamic use of the ISARIC 4C mortality score at different points following a patient’s admission with COVID-19 to evaluate whether additional information on mortality risk can be established through admission.

Methods

Details of the construction of the dataset have previously been published [6]. In summary, a range of demographic, prognostic and clinical factors were extracted from the BHNHST Electronic Health Record System (EHR) for all patients with a laboratory confirmed reverse transcription polymerase chain reaction (RT-PCR) positive swab result for SARS-CoV-2 from any anatomical site. All patients aged 18 years or more admitted to three hospital sites from BHNHST and with a positive test recorded up to 7 days before, or 7 days after their first admission were included. The resulting cohort for this study included 6,373 patients admitted between 1st August 2020 and 19th July 2021. The primary outcome measure was death, defined as all-cause mortality within 28-days of admission and all patients were followed-up for at least 28 days.

Statistical methods

Characteristics included in the ISARIC 4C mortality score (4C) were extracted for each included patient for the duration of their admission as described in the paper by Knight et al. [4]. We calculated a dynamic version of 4C denoted (4CD) every 48 hours for 28 days by applying the same score at different time points using the following method: for a patient alive and not in ICU at a time (t) hours after admission, we considered all measurements of the time-dependent variables in 4CD (respiratory rate, oxygen saturation (%), Glasgow Coma Scale (GCS) score, urea (mmol/L), C-Reactive Protein (mmol/L; CRP), lymphocyte count (n x 10^9/L) taken during the interval (t-48,t hours). If no measurements of a given variable were taken during this interval, we found the most recent 48-hour interval during which measurements on that variable were taken and used that interval. If there was no recorded measurement of a score components, we assumed no increased risk for that component. Where multiple recordings of a variable were made, we calculated and used the mean value. These values were incorporated into the 4CD score calculator along with the non-time dependent variables (age, sex, number of comorbidities) for each patient at each time-point. Receiver operating characteristic (ROC) curves were plotted to compare sensitivity and specificity of the 4C at admission and 4CD at relevant time points. AUC statistics were based on these with 95% DeLong confidence interval. Furthermore, in all patients still alive, in hospital, and not in ICU at day 8 we analysed the extent to which modifiable parameters (respiratory rate, oxygen saturation, GCS, urea and CRP) contributed to the change in score. The score change was calculated by the difference in 4CD between day 8 and entry alongside the mean change in 5 time-dependent variables (respiratory rate, urea, oxygen saturations, GCS and CRP). 95% CIs for mean changes in these were estimated a non-parametric bootstrap (5000 resamples). The distribution of 4CD factors at admission and day 8 was tabulated based on risk groups at day 8. A sensitivity analysis was used to do the same analysis only including those with complete data for all components at both time points. Cutpoints for continuous variables were based on the 4C definitions. Cutpoints based on 4C scores were based on recommendations from ISARIC. We have presented examples of score change over time for the individual score with the most number of patients within the intermediate, high and very high score groups. Linear regression and Wald tests were used to investigate the association between age, sex and any comorbidities on change from baseline to day 8 (in those still in hospital) in inflammation components of 4CD (score due to GCS, Urea, and CRP), or respiratory components (score due to oxygen saturation and respiratory rate). All statistical analyses were undertaken in R version 4.1.1.

Ethical approval

The study proposal was submitted the Joint Research Management Office at Queen Mary, University of London, who reviewed the methods and determined that as it is an evaluation of routinely collected hospital data it did not require ethics committee review and approval. The study was registered as a health services evaluation with the Barts Health NHS Trust Clinical Effectiveness Unit (reference 11121). Individual patient consent was not required or sought.

Results

Baseline characteristics of the 6,373 included patients are shown in Table 2. Unlike many cohorts of patients in hospital with SARS-CoV2 infection the cohort had good representation from all major ethnic groups.
Table 2

A table showing the demographic and clinical characteristics of all included patients at admission, and divided by mortality status at 28 days, including all components of the ISARIC 4C score as well as ethnic group.

VariableCategoryAlive at 28 days n = 5,027 (%)Dead within 28 days n = 1,346 (%)Totaln = 6,373 (%)
SexFemale2162 (43)519 (38.6)2681 (42.1)
Male2865 (57)827 (61.4)3692 (57.9)
AgeUnder 501546 (30.8)31 (2.3)1577 (24.7)
50–59996 (19.8)84 (6.2)1080 (16.9)
60–691023 (20.4)250 (18.6)1273 (20)
70–79753 (15)322 (23.9)1075 (16.9)
80 and over709 (14.1)659 (49)1368 (21.5)
Ethnic groupWhite1563 (31.1)518 (38.5)2081 (32.7)
Asian (Indian, Bangladeshi, Pakistani)1422 (28.3)387 (28.8)1809 (28.4)
Asian (other)372 (7.4)73 (5.4)445 (7)
Black671 (13.3)178 (13.2)849 (13.3)
Other391 (7.8)67 (5)458 (7.2)
Mixed40 (0.8)8 (0.6)48 (0.8)
Unknown568 (11.3)115 (8.5)683 (10.7)
Co-morbidities*02968 (59.0)382 (28.4)3350 (52.6)
1738 (14.7)239 (17.8)977 (15.3)
2 or more 1321 (26.3)725 (53.9)2046 (32.1)
Respiratory rate (breaths per minute)0 to 19 1826 (36.3)314 (23.3)2140 (33.6)
20 to 29 2441 (48.6)707 (52.5)3148 (49.4)
30 or more 476 (9.5)229 (17)705 (11.1)
Unknown284 (5.6)96 (7.1)380 (6)
Oxygen saturation (%)Less than 92 2783 (55.4)503 (37.4)3286 (51.6)
92 or more 477 (9.5)145 (10.8)622 (9.8)
Unknown1767 (35.2)698 (51.9)2465 (38.7)
Glasgow Coma Scale (score out of 15)154338 (86.3)895 (66.5)5233 (82.1)
Less than 15 394 (7.8)358 (26.6)752 (11.8)
Unknown295 (5.9)93 (6.9)388 (6.1)
Urea(mmol/L)Less than 7 3109 (61.8)416 (30.9)3525 (55.3)
7 to 14 790 (15.7)426 (31.6)1216 (19.1)
Greater than 14 368 (7.3)302 (22.4)670 (10.5)
Unknown760 (15.1)202 (15)962 (15.1)
C-reactive protein(mmol/L)less than 50 1277 (25.4)216 (16)1493 (23.4)
50–99 1061 (21.1)270 (20.1)1331 (20.9)
100 or greater 1475 (29.3)566 (42.1)2041 (32)
Unknown1214 (24.1)294 (21.8)1508 (23.7)

*As defined by the Charlson Co-morbidities index with the addition of clinician defined obesity.

*As defined by the Charlson Co-morbidities index with the addition of clinician defined obesity. To explore the change in score between survivors and decedents we created graphics for score changes during admission for each total score value. Here we present figures for the the score with the largest number of patients in the intermediate (score = 5), high (score = 10) and very high (score = 15) score groups to illustrate how the underlying score total changes during admission in patients with different risk profiles. considers the distribution of 4CD in patients with a score of 10 (n = 1,937) at admission and still in hospital over time, by subsequent mortality status. Equivalent figures for scores of 5 (n = 1,079) and 15 (n = 438) are presented in the (S1 and S2 Figs). These demonstrate that it is possible to better assess prognosis in groups of patients with identical scores at entry, by dynamically updating 4CD. S1 Table gives statistics on baseline characteristics of these sub-cohorts. The main factors driving the higher scores were older age, being male, having a greater number of comorbidities and being more likely to be confused (GCS<15). The highest baseline score group showed much greater concentrations of urea and were more likely to have high CRP levels. However, there was very little variation in respiratory rate or oxygen saturation between the groups. We undertook further analysis in patients at still in hospital 8 days after admission. shows distinct patterns in survival for patients classified at day 8 using 4CD into low (0–3), intermediate (4–8), high (9–14) and very high (15+) risk groups, with high mortality in the very high-risk group, and moderate mortality over a longer period in the high group. The ROC obtained by classifying patients using rules based on the 4CD at day 8 and the 4C score at admission is shown in the (S3 Fig). The AUC obtained with the 4CD is 0.823 (95% CI 0.800–0.845) and that with the 4C score at admission is 0.713 (95% CI (0.686–0.740), S3 Fig is the equivalent plot with 4CD calculated at day 16, again showing a much higher AUC than using the admission score alone. This pattern of superior risk assessment using up to date information and dynamic application of 4CD was also observed at all time points after admission (Table 3).
Table 3

Area under the curve of the receiver operating characteristic using 4CD score calculated every 2 days compared to 4C score on admission in all patients alive and not in ICU, with 95% Confidence Interval.

Day post admission4CD score AUC*(95% CI)Admission 4C score AUC* ((95% CI)
20.83 (0.82 to 0.84)0.81 (0.80 to 0.83)
40.85 (0.83 to 0.86)0.79 (0.77 to 0.80)
60.84 (0.82 to 0.86)0.76 (0.74 to 0.78)
80.82 (0.80 to 0.85)0.71 (0.69 to 0.74)
100.81 (0.78 to 0.83)0.68 (0.64 to 0.71)
120.81 (0.78 to 0.84)0.63 (0.59 to 0.67)
140.83 (0.79 to 0.86)0.60 (0.55 to 0.65)
160.82 (0.77 to 0.86)0.59 (0.53 to 0.65)
180.80 (0.74 to 0.86)0.55 (0.47 to 0.63)
200.84 (0.78 to 0.91)0.53 (0.44 to 0.62)
220.80 (0.73 to 0.88)0.60 (0.47 to 0.74)

* p value comparing 4CD with admission score <0.001 at all time points.

* p value comparing 4CD with admission score <0.001 at all time points. In further analysis to identify which time-dependent components contributed most to the change in score changes in Urea and CRP showed evidence to have been larger contributors to change, with a lesser contribution from respiratory rate (Table 4).
Table 4

Mean change (95%CI) in 4C components associated with an overall 4CD change between entry and day 8, in patients still in hospital at day 8.

Score changeNumberof patientsRespiratory rate score mean changeUrea score mean changeOxygen saturation score mean changeGCS score mean changeCRP score mean change
Range: 0–2Range: 0–3Range: 0–2Range: 0–2Range: 0–2
-534-0.65 (-0.91 to -0.44)-1.53 (-1.94 to -1.15)-0.88 (-1.31 to -0.62)-0.47 (-0.88 to -0.29)-1.52 (-1.76 to -1.21)
-468-0.69 (-0.87 to -0.56)-0.88 (-1.16 to -0.64)-0.83 (-1.11 to -0.62)-0.44 (-0.70 to -0.29)-1.18 (-1.37 to -0.99)
-3134-0.78 (-0.88 to -0.69)-0.36 (-0.54 to -0.20)-0.35 (-0.52 to -0.22)-0.27 (-0.43 to -0.15)-1.18 (-1.32 to -1.04)
-2224-0.61 (-0.70 to -0.54)0.03 (-0.09 to 0.14)-0.20 (-0.33 to -0.11)-0.21 (-0.31 to -0.13)-1.04 (-1.16 to -0.92)
-1287-0.53 (-0.61 to -0.47)0.07 (-0.03 to 0.15)0.04 (-0.04 to 0.12)-0.08 (-0.17 to -0.02)-0.49 (-0.59 to -0.39)
0338-0.23 (-0.29 to -0.18)0.26 (0.17 to 0.34)0.15 (0.08 to 0.23)-0.02 (-0.07 to 0.02)-0.15 (-0.25 to -0.07)
1240-0.01 (-0.10 to 0.06)0.43 (0.34 to 0.53)0.36 (0.25 to 0.46)0.03 (-0.05 to 0.10)0.23 (0.09 to 0.34)
2171-0.09 (-0.20 to -0.01)0.71 (0.58 to 0.84)0.57 (0.43 to 0.71)0.29 (0.16 to 0.41)0.55 (0.39 to 0.68)
3820.17 (0.01 to 0.29)1.00 (0.77 to 1.24)0.73 (0.49 to 0.94)0.44 (0.24 to 0.61)0.72 (0.51 to 0.89)
4340.30 (0.06 to 0.48)1.36 (0.94 to 1.73)0.97 (0.58 to 1.23)0.61 (0.18 to 0.91)0.94 (0.64 to 1.15)
A comparison of the distribution of 4C components at day 8 and entry by score band at day 8 is shown in Table 5. Those in the highest risk group at day 8 were predominantly aged 80 years or more, and male. As a group they had seen a worsening in their prognosis associated with Urea and CRP, but less change in respiratory rate, and a generally improved profile for oxygen saturation (which is likely partly due to receiving oxygen in hospital). In contrast, the lower risk groups had all a better profile at day 8 in most of the 4CD components, except oxygen saturation. Findings were unchanged in a complete case analysis (S2 Table).
Table 5

Summary statistics on score components by risk group at day 8 showing values at baseline on admission and at day 8.

Risk groups: Low (0–3), intermediate (4–8), high (9–14) and very high (15+).

VariableCategoryLow n = 184 (%)Medium n = 562 (%)High n = 835 (%)Very High n = 110 (%)
  AdmissionDay 8AdmissionDay 8AdmissionDay 8AdmissionDay 8
SexFemale88 (47.8)258 (45.9)362 (43.4)26 (23.6)
Male96 (52.2)304 (54.1)473 (56.6)84 (76.4)
AgeUnder 50148 (80.4)42 (7.5)2 (0.2)0 (0.0)
50–5936 (19.6)153 (27.2)8 (1.0)0 (0.0)
60–690 (0.0)219 (39.0)94 (11.3)0 (0.0)
70–790 (0.0)98 (17.4)268 (32.1)11 (10.0)
80 and over0 (0.0)50 (8.9)463 (55.4)99 (90.0)
Co-morbidities0158 (85.9)347 (61.7)191 (22.9)8 (7.3)
114 (7.6)96 (17.1)160 (19.2)12 (10.9)
2 or more 12 (6.5)119 (21.2)484 (58.0)90 (81.8)
Respiratory rate (breaths per minute)0 to 19 58 (34.1)145 (80.1)182 (35.3)402 (71.9)300 (39.4)582 (69.9)43 (43.4)42 (38.2)
20 to 29 95 (55.9)36 (19.9)289 (56.1)148 (26.5)417 (54.7)237 (28.5)50 (50.5)67 (60.9)
30 or more 17 (10.0)0 (0.0)44 (8.5)9 (1.6)45 (5.9)14 (1.7)6 (6.1)1 (0.9)
Unknown14 (7.6)3 (1.6)47 (8.4)3 (0.5)73 (8.7)2 (0.2)11 (10)0 (0)
Oxygen saturation (%)Less than 92 93 (80.9)164 (97.6)247 (78.7)472 (90.9)447 (84.7)636 (81.3)61 (88.4)48 (43.6)
92 or more 22 (19.1)4 (2.4)67 (21.3)47 (9.1)81 (15.3)146 (18.7)8 (11.6)62 (56.4)
Unknown69 (37.5)16 (8.7)248 (44.1)43 (7.7)307 (36.8)53 (6.3)41 (37.3)0 (0)
Glasgow Coma Scale (score out of 15)15163 (95.9)178 (98.9)471 (91.5)533 (95.2)562 (73.9)637 (76.5)53 (53.5)39 (35.5)
Less than 15 7 (4.1)2 (1.1)44 (8.5)27 (4.8)198 (26.1)196 (23.5)46 (46.5)71 (64.5)
Unknown14 (7.6)4 (2.2)47 (8.4)2 (0.4)75 (9)2 (0.2)11 (10)0 (0)
Urea(mmol/L)Less than 7 143 (92.9)134 (75.3)329 (72.0)317 (57.5)283 (40.0)232 (28.3)13 (15.1)4 (3.7)
7 to 14 10 (6.5)44 (24.7)90 (19.7)219 (39.7)279 (39.4)444 (54.1)38 (44.2)37 (33.9)
Greater than 14 1 (0.6)0 (0.0)38 (8.3)15 (2.7)146 (20.6)145 (17.7)35 (40.7)68 (62.4)
Unknown30 (16.3)6 (3.3)105 (18.7)11 (2)127 (15.2)14 (1.7)24 (21.8)1 (0.9)
C-reactive protein(mmol/L)less than 50 53 (39.0)152 (86.9)126 (30.1)384 (71.8)201 (31.1)418 (51.1)22 (27.2)19 (17.4)
50–99 31 (22.8)17 (9.7)120 (28.6)94 (17.6)193 (29.8)237 (29.0)27 (33.3)28 (25.7)
100 or greater 52 (38.2)6 (3.4)173 (41.3)57 (10.7)253 (39.1)163 (19.9)32 (39.5)62 (56.9)
Unknown48 (26.1)9 (4.9)143 (25.4)27 (4.8)188 (22.5)17 (2)29 (26.4)1 (0.9)

Summary statistics on score components by risk group at day 8 showing values at baseline on admission and at day 8.

Risk groups: Low (0–3), intermediate (4–8), high (9–14) and very high (15+). Finally, we did not find any evidence that clinically useful changes in the dynamic parts of the score were associated with subject-level measurements. Specifically, age, sex and number of co-morbidities were not associated with changes to CRP, urea or GCS. We observed a slight association of age with respiratory score change (p<0.001), however, this was too small to be of clinical utility (increase in age by 10 years associated with a respiratory score change of approximately 0.09).

Discussion

Due to the continuing pressure COVID-19 is putting on health services there remains a need for accurate clinical risk scoring to enable appropriate use of resources, as well as to identify and intervene early in deteriorating patients [7,8]. The ISARIC 4C score has been shown to provide accurate mortality risk predictions in COVID-19 patients at admission, but here we demonstrate that repeated, dynamic application of the score increases accurate mortality prediction as risk changes during hospital admission. Repeating the ISARIC 4C score at any further day after admission increases the sensitivity and specificity of the score in identifying those with the highest risk of dying. This supports previous evidence that dynamic scoring during hospital admission involving biochemical parameters can increase accuracy in predicting mortality [9]. Repeated scores may be exploited to change management of the individual patient in response to change or failure to change in the score. However, the area under the curve using dynamic scoring remains 0.8, which is adequate for a test of this kind, but leaves residual risk of false positive or false negative categorisation. The risk of falsely scoring a patient as being lower risk could result in false reassurance. Therefore, this score should only be used as one tool within a full clinical risk assessment of an admitted patient. We have demonstrated that the change in score is being driven by increasing CRP and urea, with associated worsening respiratory and neurological function. This supports the wider evidence that increasing systemic inflammatory response is associated with worse outcomes for patients [10]. Urea also forms a component of the CURB-65 clinical risk core for community acquired pneumonia and is known to be associated with worsening fluid status and renal dysfunction [11]. Existing inpatient systems to monitor patients for deterioration, such as the National Early Warning Score 2 (NEWS2) only include vital sign measurements, which cover oxygen saturation, respiratory rate, and GCS, along with oxygen use, pulse and blood pressure [12]. However, NEWS2 doesn’t include any biochemical measurements, nor age or sex, which are known to be significant contributors to COVID-19 mortality [13]. Other studies have added age to NEWS parameters to improve accuracy, but these are lower than the dynamic application of ISARIC 4C described here [14]. These results have been derived from a large, ethnically, and socio-economically diverse population of hospital in-patients, with a wide range of underlying co-morbidities. The window for included patients covers the introduction of core therapeutic interventions, such the use of the anti-viral remdesivir, systemic steroids (dexamethasone), interleukin-6 receptor blockade (tocilizumab/sarilumab), REGEN-COV (casirivimab and imdevimab) amongst others as identified through trials such as the RECOVERY trial [15]. It also includes patients infected with both alpha and delta SARS-CoV-2 variant viruses [16]. It includes a cohort of patients prior to widespread vaccination being introduced in the UK (from December 2020), those partially and completely vaccinated between December and July 2021 [17]. Vaccinated patients are less likely to suffer from severe disease, therefore, it is likely that ISARIC 4C will remain of most relevance in patients who are unvaccinated and more likely to have high levels of viral replication and subsequent inflammatory response [18]. The ISARIC 4C score already features as a recommended tool for risk assessment when prescribing Remdesivir, 4C score ≥4 (those with a lower score 0–3 being likely to recover without treatment), however there is potential future scope for the ISARIC 4C score to assist in guiding therapeutic decisions for other treatments [19].

Limitations

Limitations include lack of inclusion of prescribing and therapeutic data within the dataset, which cannot be factored into the appropriateness of using the score. We only included parameters within the ISARIC 4C model and did not consider other factors which may contribute to risk. Included patients were from a defined geographic area and findings may not be generalisable to other contexts. We did not have information on the vaccine status of patients included in this study.

Conclusion

Dynamic use of the ISARIC 4C score can provide accurate and timely information on mortality risk during a patient’s hospital admission.

Showing mean and range of ISARIC 4C scores at 48-hour intervals amongst survivors (turquoise) and decedents (red) with a score of 5 at admission.

(DOCX) Click here for additional data file.

Showing mean and range of ISARIC 4C scores at 48-hour intervals amongst survivors (turquoise) and decedents (red) with a score of 15 at admission.

(DOCX) Click here for additional data file.

Receiver operating characteristic curves comparing sensitivity and specificity of mortality risk using 4C score at admission (green) and at day 16 (blue).

(DOCX) Click here for additional data file.

Baseline characteristics on score components at admission in patient grouped by admission 4C scores of 5, 10 and 15.

(DOCX) Click here for additional data file.

4CD components (n, %) in patients with low (0–3), intermediate (4–8), high (9–14) and very high (15+) scores at day 8, for those with complete data at both time points in all measurement.

(DOCX) Click here for additional data file.

Transfer Alert

This paper was transferred from another journal. As a result, its full editorial history (including decision letters, peer reviews and author responses) may not be present. 8 Jun 2022
PONE-D-22-13262
Using ISARIC 4C mortality score to predict dynamic changes in mortality risk in COVID-19 patients during hospital admission.
PLOS ONE Dear Dr. Crocker-Buque, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jul 23 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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In your Data Availability statement, you have not specified where the minimal data set underlying the results described in your manuscript can be found. PLOS defines a study's minimal data set as the underlying data used to reach the conclusions drawn in the manuscript and any additional data required to replicate the reported study findings in their entirety. All PLOS journals require that the minimal data set be made fully available. For more information about our data policy, please see http://journals.plos.org/plosone/s/data-availability. "Upon re-submitting your revised manuscript, please upload your study’s minimal underlying data set as either Supporting Information files or to a stable, public repository and include the relevant URLs, DOIs, or accession numbers within your revised cover letter. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. Any potentially identifying patient information must be fully anonymized. Important: If there are ethical or legal restrictions to sharing your data publicly, please explain these restrictions in detail. Please see our guidelines for more information on what we consider unacceptable restrictions to publicly sharing data: http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. Note that it is not acceptable for the authors to be the sole named individuals responsible for ensuring data access. We will update your Data Availability statement to reflect the information you provide in your cover letter. 3. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. Additional Editor Comments: It is an interesting article that provides useful information for the management of patients with COVID-19. However, Reviewer #1 is correct that the presentation is very confusing. The numbering of the supplementary figures does not correspond to the text. Normally, this formal sloppiness would lead me to decide to reject the article, but given the importance of having as many data as possible on this disease, I decide to give the authors another chance and recommend that they submit a new revised version that answers ALL the questions from the reviewers. On the other hand, AUC's of 0.80 are good, but not great. There will be a percentage of falsely positive or negative cases. How do the authors propose that this problem be addressed? [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Thank you for the opportunity to review this article. The authors examine the prognostic ability of ISARIC 4C by capturing it dynamically, showing that the AUC at Day 8 is 0.82, which is better than the AUC at admission of 0.71. While I find the content of the paper to be significant, I have a few concerns about the content. First, regarding the overall structure of the paper, there are several figures and tables that are not mentioned in the main text, making it very difficult for the reader to understand the meaning of the figures and tables and what the authors are trying to show by presenting them. The author also asks the reader to have knowledge of events that cannot be said to be generalized, such as the components of the score, and I feel this also makes it difficult to convey the content to the reader. Below we point out some specific issues. 1. It is obvious that the closer the point of prediction is to the time of outcome occurrence, the better the predictive ability. So, I think that dynamically evaluating this score is inherently of less clinical significance. 2. The authors hope that dynamic evaluation of this score will help in the proper allocation of medical resources and treatment management. What specifically do the authors expect that evaluating day8 scores will contribute to the proper allocation of resources? Does a good score mean less human resources? Conversely, if the score is poor, does it mean less human resources to prioritize patients who can be saved? Will you change the units you manage? It seems to me that the day8 score is unlikely to contribute to a change in strategy for resource allocation as much as checking the score at the time of admission and planning accordingly. I partially agree that Day 8 scores do contribute to treatment strategies, but there is no specific indication of which scores are associated with which pathologies and which treatments are effective. 3. Although Table 1 indirectly mentions the ISARIC4C components and cutoffs, the authors should include the scores and specifically specify their contents in the text, or create a separate Table or Figure to present them. 4. The authors state that "we assumed no increased risk for that component" for the missing values, does this mean LOCF using the previous observation point? Does this mean that the score is underestimated for patients who deteriorate? Please specify how much of the missing data actually occurred for each component. 5. In Figure 1, you describe the transition during the course of a patient with a score of 10 on admission, and in Figure 5 you present a score of 5 and in Figure 6 a score of 15 in a similar manner, but Method does not mention such a presentation beforehand, which seems very abrupt. It seems very abrupt. Also, why did the authors employ scores 5, 10, and 15? 6. Figure 2 and 3 are similarly abrupt and not mentioned in the text. Figure 3 has no more information than Table 2. Why did the authors present Figure 3? Reviewer #2: A very interesting study, it would be interesting to see if this score could indicate the risk of mortality in other environments, countries as well. It would be necessary to adapt the heading of Table 1. It is not clear which comorbidities have been studied, could these data be unknown in some patients? How many of the patients studied had received vaccines against SARS CoV2, which vaccines, how many days before presenting COVID-19 symptoms, and what relationship is observed with mortality in these cases? What is the mortality of patients who have needed ICU and what of patients who have only been admitted to the ward? ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Hiroki Nishiwaki Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. 4 Jul 2022 Reviewer #1: Thank you for the opportunity to review this article. The authors examine the prognostic ability of ISARIC 4C by capturing it dynamically, showing that the AUC at Day 8 is 0.82, which is better than the AUC at admission of 0.71. While I find the content of the paper to be significant, I have a few concerns about the content. First, regarding the overall structure of the paper, there are several figures and tables that are not mentioned in the main text, making it very difficult for the reader to understand the meaning of the figures and tables and what the authors are trying to show by presenting them. We have clarified this in the text, in addition to the Editor’s comments. The author also asks the reader to have knowledge of events that cannot be said to be generalized, such as the components of the score, and I feel this also makes it difficult to convey the content to the reader. We have added the score components and weighting to the introduction (Table 1) Below we point out some specific issues. 1. It is obvious that the closer the point of prediction is to the time of outcome occurrence, the better the predictive ability. So, I think that dynamically evaluating this score is inherently of less clinical significance. While this is to be expected, we felt it was also useful to conclusively prove this. The clinical relevance of this work is that the ISARIC 4C score is currently only validated for use at admission. In our hospital, we proposed using it at a second point during a patient’s admission, particularly in patients who we expected to have a long admission (> 1 week), but this was rejected as lacking evidence as to when re-scoring would be appropriate and if this would provide additional information. We have added some further clarification on this in the introduction. 2. The authors hope that dynamic evaluation of this score will help in the proper allocation of medical resources and treatment management. What specifically do the authors expect that evaluating day8 scores will contribute to the proper allocation of resources? Does a good score mean less human resources? Conversely, if the score is poor, does it mean less human resources to prioritize patients who can be saved? Will you change the units you manage? It seems to me that the day8 score is unlikely to contribute to a change in strategy for resource allocation as much as checking the score at the time of admission and planning accordingly. I partially agree that Day 8 scores do contribute to treatment strategies, but there is no specific indication of which scores are associated with which pathologies and which treatments are effective. In the context of our hospital, we had an extremely high volume of patients, often with many hundreds of inpatients with COVID-19 at the same time. Our staff were stretched to capacity in providing care. Of those not admitted to critical care, patients receiving oxygen were admitted to a high-acuity medical admissions ward, and those on non-invasive ventilation support to the respiratory ward. However, that left us with a very large number of (mainly elderly) patients who had very long hospital stays (1-3 weeks), some of whom deteriorated and died during their admission without necessarily requiring oxygen support. Many of these patients were managed on a low-acuity elderly care ward, which had a lower staff to patient ratio than the acute medical units, as usually these patients have lower acuity admissions. Our hypothesis for the use of this score was that patients at day 8 whose scores remained high or had increased since admission could have remained in a higher acuity acute medical ward. We have not added anything into the manuscript in this regard, as our experience may not match those of other hospitals, and it would be for other clinical services to decide if the additional information provided is useful in their clinical context. 3. Although Table 1 indirectly mentions the ISARIC4C components and cutoffs, the authors should include the scores and specifically specify their contents in the text, or create a separate Table or Figure to present them. This has been added to the introduction as the new Table 1. 4. The authors state that "we assumed no increased risk for that component" for the missing values, does this mean LOCF using the previous observation point? Does this mean that the score is underestimated for patients who deteriorate? Please specify how much of the missing data actually occurred for each component. Information on missing data at entry is provided in Table 2 (i.e. total number of patients in the sample minus the total in each category). We have not presented this information separately, but it can be calculated if required as the overall amount of missing information was very low. The proportion unknown was higher in those who died within 28d for oxygen saturation, slightly higher between those who died within 28d and not for respiratory rate, GCS, similar for Urea, and slightly lower for C-reactive protein. Overall, this suggests that our approach of assuming no increased risk when the value was missing was conservative at baseline, and with full data the score is likely to have been more strongly associated with the outcome. We were therefore mostly concerned with a possible risk of bias arising in evaluation of improvement relative to baseline risk assessment due to increased completeness of the unknown variables at baseline. To help assess this a complete case analysis was done for a version of Table 6, but only using those with all available components of the score (supplementary Table S8). The results from this analysis were very similar to the full sample (Table 6). On the other hand as the reviewer notes, there is also a risk of bias in the other direction (risk model performance is underestimated) arising from LOCF. Generally, risk components in the cohort went down through time, so using LOCF may overstate risk on average at later points, which would make the model less informative. However, the model did show improvement using later values. 5. In Figure 1, you describe the transition during the course of a patient with a score of 10 on admission, and in Figure 5 you present a score of 5 and in Figure 6 a score of 15 in a similar manner, but Method does not mention such a presentation beforehand, which seems very abrupt. It seems very abrupt. Also, why did the authors employ scores 5, 10, and 15? Agreed – this is very abrupt and is due to editing, so apologies for that. We created figures for all scores and the underlying analysis includes all the patients with all possible scores. The Figures are included as visual examples to demonstrate the differences in behaviour of the score in intermediate, high and very high-risk scoring patients. Distribution of patients across total score values was not even due to high association between different components of the score. To provide a visual representation of the results we selected one score from each of the low, medium and high-risk groups to show differences between these group. We selected 5, 10 and 15 as the scores with the largest number of patients. We have clarified this in the text. 6. Figure 2 and 3 are similarly abrupt and not mentioned in the text. Figure 2 and 3 were referenced in the text, in the paragraph at the end of page 5, but we agree this was unclear and have modified this in the updated manuscript. Figure 3 has no more information than Table 2. Why did the authors present Figure 3? We felt a visual representation of these data would be helpful to the reader, particularly people with previous experience of evaluating ROC curves. However, we have moved this to the supplementary material as Figure S5. Reviewer #2: A very interesting study, it would be interesting to see if this score could indicate the risk of mortality in other environments, countries as well. We agree and hope that the further detail about how the components of the score change during the admission will encourage it to be used by other clinical teams. It would be necessary to adapt the heading of Table 1. This has been amended. It is not clear which comorbidities have been studied, could these data be unknown in some patients? This is part of the Charlson Co-morbidity Index with the addition of clinician defined obesity and has been detailed in the introduction. How many of the patients studied had received vaccines against SARS CoV2, which vaccines, how many days before presenting COVID-19 symptoms, and what relationship is observed with mortality in these cases? The majority of patients were included in the study prior to widespread vaccination. However, we do not know how many of the patients were vaccinated as this is not included in our data-set, and is not available within the hospital’s data warehouse as these data are held by community health services. We also wish we could have included this! This is mentioned as a limitation in the limitation section. What is the mortality of patients who have needed ICU and what of patients who have only been admitted to the ward? Unfortunately, this analysis is outside the scope of this study, as we did not include data on ICU admission status in the risk analysis in this way. The ISARIC 4C score is not validated for use in patients admitted to clinical care. However, this would be worthy of further work. Submitted filename: Response to Reviewers.docx Click here for additional data file. 24 Aug 2022 Using ISARIC 4C mortality score to predict dynamic changes in mortality risk in COVID-19 patients during hospital admission. PONE-D-22-13262R1 Dear Dr. Crocker-Buque, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Jordi Camps Academic Editor PLOS ONE Additional Editor Comments (optional): The authors satisfactorily answered the Reviewers' comments and suggestions. Reviewers' comments: 8 Sep 2022 PONE-D-22-13262R1 Using ISARIC 4C mortality score to predict dynamic changes in mortality risk in COVID-19 patients during hospital admission. Dear Dr. Crocker-Buque: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Jordi Camps Academic Editor PLOS ONE
  12 in total

1.  Developing useful early warning and prognostic scores for COVID-19.

Authors:  Charles Coughlan; Shati Rahman; Kate Honeyford; Céire E Costelloe
Journal:  Postgrad Med J       Date:  2021-05-28       Impact factor: 2.401

2.  Covid-19: Experts condemn UK "freedom day" as dangerous and unethical.

Authors:  Elisabeth Mahase
Journal:  BMJ       Date:  2021-07-19

3.  Validation of a predictive rule for the management of community-acquired pneumonia.

Authors:  A Capelastegui; P P España; J M Quintana; I Areitio; I Gorordo; M Egurrola; A Bilbao
Journal:  Eur Respir J       Date:  2006-01       Impact factor: 16.671

4.  Predictive Value of an Age-Based Modification of the National Early Warning System in Hospitalized Patients With COVID-19.

Authors:  Ryan C Maves; Stephanie A Richard; David A Lindholm; Nusrat Epsi; Derek T Larson; Christian Conlon; Kyle Everson; Steffen Lis; Paul W Blair; Sharon Chi; Anuradha Ganesan; Simon Pollett; Timothy H Burgess; Brian K Agan; Rhonda E Colombo; Christopher J Colombo
Journal:  Open Forum Infect Dis       Date:  2021-08-10       Impact factor: 3.835

5.  Risk stratification of patients admitted to hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: development and validation of the 4C Mortality Score.

Authors:  Stephen R Knight; Antonia Ho; Riinu Pius; Iain Buchan; Gail Carson; Thomas M Drake; Jake Dunning; Cameron J Fairfield; Carrol Gamble; Christopher A Green; Rishi Gupta; Sophie Halpin; Hayley E Hardwick; Karl A Holden; Peter W Horby; Clare Jackson; Kenneth A Mclean; Laura Merson; Jonathan S Nguyen-Van-Tam; Lisa Norman; Mahdad Noursadeghi; Piero L Olliaro; Mark G Pritchard; Clark D Russell; Catherine A Shaw; Aziz Sheikh; Tom Solomon; Cathie Sudlow; Olivia V Swann; Lance Cw Turtle; Peter Jm Openshaw; J Kenneth Baillie; Malcolm G Semple; Annemarie B Docherty; Ewen M Harrison
Journal:  BMJ       Date:  2020-09-09

6.  Improving clinical management of COVID-19: the role of prediction models.

Authors:  Laure Wynants; Giovanni Sotgiu
Journal:  Lancet Respir Med       Date:  2021-01-11       Impact factor: 30.700

7.  Development and validation of the ISARIC 4C Deterioration model for adults hospitalised with COVID-19: a prospective cohort study.

Authors:  Rishi K Gupta; Ewen M Harrison; Antonia Ho; Annemarie B Docherty; Stephen R Knight; Maarten van Smeden; Ibrahim Abubakar; Marc Lipman; Matteo Quartagno; Riinu Pius; Iain Buchan; Gail Carson; Thomas M Drake; Jake Dunning; Cameron J Fairfield; Carrol Gamble; Christopher A Green; Sophie Halpin; Hayley E Hardwick; Karl A Holden; Peter W Horby; Clare Jackson; Kenneth A Mclean; Laura Merson; Jonathan S Nguyen-Van-Tam; Lisa Norman; Piero L Olliaro; Mark G Pritchard; Clark D Russell; James Scott-Brown; Catherine A Shaw; Aziz Sheikh; Tom Solomon; Cathie Sudlow; Olivia V Swann; Lance Turtle; Peter J M Openshaw; J Kenneth Baillie; Malcolm G Semple; Mahdad Noursadeghi
Journal:  Lancet Respir Med       Date:  2021-01-11       Impact factor: 30.700

8.  Factors associated with COVID-19-related death using OpenSAFELY.

Authors:  Elizabeth J Williamson; Alex J Walker; Krishnan Bhaskaran; Seb Bacon; Chris Bates; Caroline E Morton; Helen J Curtis; Amir Mehrkar; David Evans; Peter Inglesby; Jonathan Cockburn; Helen I McDonald; Brian MacKenna; Laurie Tomlinson; Ian J Douglas; Christopher T Rentsch; Rohini Mathur; Angel Y S Wong; Richard Grieve; David Harrison; Harriet Forbes; Anna Schultze; Richard Croker; John Parry; Frank Hester; Sam Harper; Rafael Perera; Stephen J W Evans; Liam Smeeth; Ben Goldacre
Journal:  Nature       Date:  2020-07-08       Impact factor: 49.962

Review 9.  Association of elevated inflammatory markers and severe COVID-19: A meta-analysis.

Authors:  Pan Ji; Jieyun Zhu; Zhimei Zhong; Hongyuan Li; Jielong Pang; Bocheng Li; Jianfeng Zhang
Journal:  Medicine (Baltimore)       Date:  2020-11-20       Impact factor: 1.889

10.  Value of dynamic clinical and biomarker data for mortality risk prediction in COVID-19: a multicentre retrospective cohort study.

Authors:  Carlo Berzuini; Cathal Hannan; Andrew King; Andy Vail; Claire O'Leary; David Brough; James Galea; Kayode Ogungbenro; Megan Wright; Omar Pathmanaban; Sharon Hulme; Stuart Allan; Luisa Bernardinelli; Hiren C Patel
Journal:  BMJ Open       Date:  2020-09-23       Impact factor: 2.692

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