Literature DB >> 36222899

Research on the influence of APOBEC family on the occurrence, diagnosis, and treatment of various tumors.

Jing Yang1,2, Jiali Hou3, Mengxia Li4.   

Abstract

BACKGROUND: Apolipoprotein B mRNA-editing catalytic polypeptide (APOBEC) is a family of highly efficient cytidine deaminase enzymes. APOBECs have been proven to deaminate cytidine on single-stranded DNA or RNA. Inducing the deamination of cytosine on the target gene into uracil, which exerts a variety of physiological functions, plays an important role in innate immunity, adaptive immunity, and antiviral. As the research progresses, APOBECs have been confirmed to be highly expressed in a variety of tumors, causing abnormal mutations in host genes, leading to inactivation of tumor suppressor genes or activation of proto-oncogenes, and their role in tumor development and as diagnostic and treatment markers gradually be found.
CONCLUSION: This article will review the mechanism of APOBECs and their impact on tumor occurrence, development, diagnosis, and treatment, and provide a theoretical basis for future tumor treatment.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  APOBECs; Deamidation; Oncology diagnosis and treatment; Physiological functions; Tumorigenesis

Year:  2022        PMID: 36222899     DOI: 10.1007/s00432-022-04395-2

Source DB:  PubMed          Journal:  J Cancer Res Clin Oncol        ISSN: 0171-5216            Impact factor:   4.322


  44 in total

1.  APOBEC mutagenesis is tightly linked to the immune landscape and immunotherapy biomarkers in head and neck squamous cell carcinoma.

Authors:  Daniel L Faden; Fei Ding; Yan Lin; Shuyan Zhai; Fengshen Kuo; Timothy A Chan; Luc G Morris; Robert L Ferris
Journal:  Oral Oncol       Date:  2019-07-30       Impact factor: 5.337

2.  APOBEC3G promotes liver metastasis in an orthotopic mouse model of colorectal cancer and predicts human hepatic metastasis.

Authors:  Qingqing Ding; Chun-Ju Chang; Xiaoming Xie; Weiya Xia; Jer-Yen Yang; Shao-Chun Wang; Yan Wang; Jiahong Xia; Libo Chen; Changchun Cai; Huabin Li; Chia-Jui Yen; Hsu-Ping Kuo; Dung-Fang Lee; Jingyu Lang; Longfei Huo; Xiaoyun Cheng; Yun-Ju Chen; Chia-Wei Li; Long-Bin Jeng; Jennifer L Hsu; Long-Yuan Li; Alai Tan; Steven A Curley; Lee M Ellis; Raymond N Dubois; Mien-Chie Hung
Journal:  J Clin Invest       Date:  2011-10-10       Impact factor: 14.808

3.  Comment on "The global tree restoration potential".

Authors:  Joseph W Veldman; Julie C Aleman; Swanni T Alvarado; T Michael Anderson; Sally Archibald; William J Bond; Thomas W Boutton; Nina Buchmann; Elise Buisson; Josep G Canadell; Michele de Sá Dechoum; Milton H Diaz-Toribio; Giselda Durigan; John J Ewel; G Wilson Fernandes; Alessandra Fidelis; Forrest Fleischman; Stephen P Good; Daniel M Griffith; Julia-Maria Hermann; William A Hoffmann; Soizig Le Stradic; Caroline E R Lehmann; Gregory Mahy; Ashish N Nerlekar; Jesse B Nippert; Reed F Noss; Colin P Osborne; Gerhard E Overbeck; Catherine L Parr; Juli G Pausas; R Toby Pennington; Michael P Perring; Francis E Putz; Jayashree Ratnam; Mahesh Sankaran; Isabel B Schmidt; Christine B Schmitt; Fernando A O Silveira; A Carla Staver; Nicola Stevens; Christopher J Still; Caroline A E Strömberg; Vicky M Temperton; J Morgan Varner; Nicholas P Zaloumis
Journal:  Science       Date:  2019-10-18       Impact factor: 47.728

4.  A prevalent cancer susceptibility APOBEC3A hybrid allele bearing APOBEC3B 3'UTR enhances chromosomal DNA damage.

Authors:  Vincent Caval; Rodolphe Suspène; Milana Shapira; Jean-Pierre Vartanian; Simon Wain-Hobson
Journal:  Nat Commun       Date:  2014-10-09       Impact factor: 14.919

5.  Multi-modality analysis supports APOBEC as a major source of mutations in head and neck squamous cell carcinoma.

Authors:  Daniel L Faden; Sean Thomas; Paul G Cantalupo; Nishant Agrawal; Jeffrey Myers; Joseph DeRisi
Journal:  Oral Oncol       Date:  2017-09-13       Impact factor: 5.337

6.  The EGFR T790M Mutation Is Acquired through AICDA-Mediated Deamination of 5-Methylcytosine following TKI Treatment in Lung Cancer.

Authors:  Najwa El Kadi; Luo Wang; April Davis; Hasan Korkaya; Alexander Cooke; Varun Vadnala; Noah A Brown; Bryan L Betz; Marilia Cascalho; Gregory P Kalemkerian; Khaled A Hassan
Journal:  Cancer Res       Date:  2018-10-17       Impact factor: 12.701

7.  APOBEC3B-mediated corruption of the tumor cell immunopeptidome induces heteroclitic neoepitopes for cancer immunotherapy.

Authors:  Christopher B Driscoll; Matthew R Schuelke; Timothy Kottke; Jill M Thompson; Phonphimon Wongthida; Jason M Tonne; Amanda L Huff; Amber Miller; Kevin G Shim; Amy Molan; Cynthia Wetmore; Peter Selby; Adel Samson; Kevin Harrington; Hardev Pandha; Alan Melcher; Jose S Pulido; Reuben Harris; Laura Evgin; Richard G Vile
Journal:  Nat Commun       Date:  2020-02-07       Impact factor: 14.919

8.  APOBEC3A is a prominent cytidine deaminase in breast cancer.

Authors:  Luis M Cortez; Amber L Brown; Madeline A Dennis; Christopher D Collins; Alexander J Brown; Debra Mitchell; Tony M Mertz; Steven A Roberts
Journal:  PLoS Genet       Date:  2019-12-16       Impact factor: 5.917

9.  Signatures of mutational processes in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Samuel A J R Aparicio; Sam Behjati; Andrew V Biankin; Graham R Bignell; Niccolò Bolli; Ake Borg; Anne-Lise Børresen-Dale; Sandrine Boyault; Birgit Burkhardt; Adam P Butler; Carlos Caldas; Helen R Davies; Christine Desmedt; Roland Eils; Jórunn Erla Eyfjörd; John A Foekens; Mel Greaves; Fumie Hosoda; Barbara Hutter; Tomislav Ilicic; Sandrine Imbeaud; Marcin Imielinski; Marcin Imielinsk; Natalie Jäger; David T W Jones; David Jones; Stian Knappskog; Marcel Kool; Sunil R Lakhani; Carlos López-Otín; Sancha Martin; Nikhil C Munshi; Hiromi Nakamura; Paul A Northcott; Marina Pajic; Elli Papaemmanuil; Angelo Paradiso; John V Pearson; Xose S Puente; Keiran Raine; Manasa Ramakrishna; Andrea L Richardson; Julia Richter; Philip Rosenstiel; Matthias Schlesner; Ton N Schumacher; Paul N Span; Jon W Teague; Yasushi Totoki; Andrew N J Tutt; Rafael Valdés-Mas; Marit M van Buuren; Laura van 't Veer; Anne Vincent-Salomon; Nicola Waddell; Lucy R Yates; Jessica Zucman-Rossi; P Andrew Futreal; Ultan McDermott; Peter Lichter; Matthew Meyerson; Sean M Grimmond; Reiner Siebert; Elías Campo; Tatsuhiro Shibata; Stefan M Pfister; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2013-08-14       Impact factor: 49.962

10.  Genomic Predictors of Good Outcome, Recurrence, or Progression in High-Grade T1 Non-Muscle-Invasive Bladder Cancer.

Authors:  Joaquim Bellmunt; Jaegil Kim; Brendan Reardon; Júlia Perera-Bel; Anna Orsola; Alejo Rodriguez-Vida; Stephanie A Wankowicz; Michaela Bowden; Justine A Barletta; Juan Morote; Inés de Torres; Nuria Juanpere; Josep Lloreta-Trull; Silvia Hernandez; Kent W Mouw; Mary-Ellen Taplin; Paloma Cejas; Henry W Long; Eliezer M Van Allen; Gad Getz; David J Kwiatkowski
Journal:  Cancer Res       Date:  2020-08-31       Impact factor: 13.312

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