| Literature DB >> 36221263 |
Dehong Li1,2, Yan Lu2, Fenghui Zhao3, Li Yan2, Xingwen Yang2, Lianhua Wei2, Xiaoyan Yang2, Xiumei Yuan2, Kehu Yang1.
Abstract
Background: Early diagnosis and treatment are imperative for improving survival in gastric cancer (GC). This work aimed to assess the ability of human serum amino acid and acylcarnitine profiles in distinguishing GC cases from atrophic gastritis (AG) and control superficial gastritis (SG) patients.Entities:
Keywords: Acylcarnitines; Amino acids; Atrophic Gastritis; Gastric cancer; Metabolomics; Superficial gastritis
Year: 2022 PMID: 36221263 PMCID: PMC9548315 DOI: 10.7717/peerj.14115
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 3.061
Patient features in the SG, AG and GC groups.
| SG | AG | GC | |
|---|---|---|---|
| N | 72 | 74 | 69 |
| Age ( | 49 (29) | 50 (16.25) | 62 (14) |
| Sex (male/female) | 18/54 | 45/29 | 47/22 |
| 20/52 | 30/44 | 31/38 | |
|
| |||
| I | NA | NA | 9 |
| II | NA | NA | 37 |
| III | NA | NA | 20 |
| IV | NA | NA | 3 |
|
| |||
| Gastric antrum | NA | NA | 32 |
| Gastric body | NA | NA | 24 |
| Whole gastric | NA | NA | 6 |
| fundus-cardia | NA | NA | 7 |
|
| |||
| poor | NA | NA | 39 |
| moderate | NA | NA | 23 |
| high | NA | NA | 7 |
Notes.
P < 0.05, GC versus AG.
P < 0.05, GC versus SG.
P < 0.05, AG compared with SG.
Figure 1An orthogonal partial least square discriminant analysis (OPLS-DA) model.
(A) GC cases tended to cluster to the right, while the AG and SG groups clustered to the left. The OPLS-DA model revealed fairly separated GC from AG and SG. There was no separation between AG and SG. (B) Score plots for AG and SG cases. The model was unable to distinguish AG and SG. (C) and (E) OPLS-DA achieved a fairly distinct separation between GC and AG and between GC and SG. (D) and (F) The 200-time permutation test revealed no overt model over fitting. The y-axis intercepts were R2 (0.0, 0.136; 0.0, 0.127) and Q2 (0.0, −0.327; 0.0, −0.284).
Figure 2VIP plot for the OPLS-DA model in preselecting variables.
(A) GC group versus AG group, *VIP >1. (B) GC group versus SG group, *VIP >1.
Figure 3Box plots for select metabolites (Median (interquartile range)) differentiating GC, AG and SG.
* P < 0.05, ** p < 0.001, and *** p < 0.0001.
ROC curve analysis of diagnostic indicators in differentiating GC from AG and SG.
|
|
|
|
|
|
| |
|---|---|---|---|---|---|---|
|
| ||||||
| AUC | 0.9986 | 0.9779 | 0.9910 | 0.8793 | 0.7385 | 0.6818 |
| Cut-off value | 0.0555 | 0.227 | 0.0545 | 11.29 | 37.25 | |
| Sensitivity (%) | 98.55 | 90.28 | 97.22 | 76.39 | 65.28 | 83.33 |
| Specificity (%) | 98.55 | 97.1 | 95.65 | 89.86 | 81.16 | 50.72 |
| <0.0001 | <0.0001 | <0.0001 | <0.0001 | <0.0001 | 0.0002 | |
|
| ||||||
| AUC | 0.9961 | 0.9765 | 0.9882 | 0.8789 | 0.7309 | 0.7229 |
| Cut-off value | 0.0555 | 0.237 | 0.0625 | 9.462 | 30.99 | |
| Sensitivity (%) | 98.55 | 87.84 | 98.65 | 82.43 | 54.05 | 75.68 |
| Specificity (%) | 100 | 97.1 | 94.2 | 79.71 | 91.3 | 63.77 |
| <0.0001 | <0.0001 | <0.0001 | <0.0001 | <0.0001 | <0.0001 | |
|
| ||||||
| AUC | 0.9977 | 0.9772 | 0.9896 | 0.8791 | 0.7347 | 0.7026 |
| Cut-off value | 0.0555 | 0.237 | 0.0625 | 10.59 | 37.25 | |
| Sensitivity (%) | 99.32 | 89.04 | 97.95 | 83.56 | 59.59 | 83.56 |
| Specificity (%) | 98.55 | 97.1 | 94.2 | 79.71 | 85.51 | 50.72 |
| <0.0001 | <0.0001 | <0.0001 | <0.0001 | <0.0001 | <0.0001 |