Literature DB >> 36215496

Connecting sequence features within the disordered C-terminal linker of Bacillus subtilis FtsZ to functions and bacterial cell division.

Min Kyung Shinn1,2, Megan C Cohan1, Jessie L Bullock3, Kiersten M Ruff1,2, Petra A Levin3, Rohit V Pappu1,2.   

Abstract

Intrinsically disordered regions (IDRs) can function as autoregulators of folded enzymes to which they are tethered. One example is the bacterial cell division protein FtsZ. This includes a folded core and a C-terminal tail (CTT) that encompasses a poorly conserved, disordered C-terminal linker (CTL) and a well-conserved 17-residue C-terminal peptide (CT17). Sites for GTPase activity of FtsZs are formed at the interface between GTP binding sites and T7 loops on cores of adjacent subunits within dimers. Here, we explore the basis of autoregulatory functions of the CTT in Bacillus subtilis FtsZ (Bs-FtsZ). Molecular simulations show that the CT17 of Bs-FtsZ makes statistically significant CTL-mediated contacts with the T7 loop. Statistical coupling analysis of more than 1,000 sequences from FtsZ orthologs reveals clear covariation of the T7 loop and the CT17 with most of the core domain, whereas the CTL is under independent selection. Despite this, we discover the conservation of nonrandom sequence patterns within CTLs across orthologs. To test how the nonrandom patterns of CTLs mediate CTT-core interactions and modulate FtsZ functionalities, we designed Bs-FtsZ variants by altering the patterning of oppositely charged residues within the CTL. Such alterations disrupt the core-CTT interactions, lead to anomalous assembly and inefficient GTP hydrolysis in vitro and protein degradation, aberrant assembly, and disruption of cell division in vivo. Our findings suggest that viable CTLs in FtsZs are likely to be IDRs that encompass nonrandom, functionally relevant sequence patterns that also preserve three-way covariation of the CT17, the T7 loop, and core domain.

Entities:  

Keywords:  autoinhibition; autoregulation; covariation; intrinsically disordered proteins; polymerization

Mesh:

Substances:

Year:  2022        PMID: 36215496      PMCID: PMC9586301          DOI: 10.1073/pnas.2211178119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  101 in total

Review 1.  Microtubules, membranes and cytokinesis.

Authors:  A F Straight; C M Field
Journal:  Curr Biol       Date:  2000-10-19       Impact factor: 10.834

Review 2.  Cytokinesis in plant and animal cells: endosomes 'shut the door'.

Authors:  Frantisek Baluska; Diedrik Menzel; Peter W Barlow
Journal:  Dev Biol       Date:  2006-04-03       Impact factor: 3.582

3.  Structure of the gene for the transition state regulator, abrB: regulator synthesis is controlled by the spo0A sporulation gene in Bacillus subtilis.

Authors:  M Perego; G B Spiegelman; J A Hoch
Journal:  Mol Microbiol       Date:  1988-11       Impact factor: 3.501

4.  A High-Throughput Mutational Scan of an Intrinsically Disordered Acidic Transcriptional Activation Domain.

Authors:  Max V Staller; Alex S Holehouse; Devjanee Swain-Lenz; Rahul K Das; Rohit V Pappu; Barak A Cohen
Journal:  Cell Syst       Date:  2018-03-07       Impact factor: 10.304

5.  The ClpX chaperone modulates assembly of the tubulin-like protein FtsZ.

Authors:  Richard B Weart; Shunji Nakano; Brooke E Lane; Peter Zuber; Petra Anne Levin
Journal:  Mol Microbiol       Date:  2005-07       Impact factor: 3.501

6.  Treadmilling by FtsZ filaments drives peptidoglycan synthesis and bacterial cell division.

Authors:  Alexandre W Bisson-Filho; Yen-Pang Hsu; Georgia R Squyres; Erkin Kuru; Fabai Wu; Calum Jukes; Yingjie Sun; Cees Dekker; Seamus Holden; Michael S VanNieuwenhze; Yves V Brun; Ethan C Garner
Journal:  Science       Date:  2017-02-17       Impact factor: 47.728

7.  Protein sectors: evolutionary units of three-dimensional structure.

Authors:  Najeeb Halabi; Olivier Rivoire; Stanislas Leibler; Rama Ranganathan
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

Review 8.  An intrinsically disordered linker plays a critical role in bacterial cell division.

Authors:  P J Buske; Anuradha Mittal; Rohit V Pappu; Petra Anne Levin
Journal:  Semin Cell Dev Biol       Date:  2014-10-13       Impact factor: 7.727

9.  Directed mutational scanning reveals a balance between acidic and hydrophobic residues in strong human activation domains.

Authors:  Max V Staller; Eddie Ramirez; Sanjana R Kotha; Alex S Holehouse; Rohit V Pappu; Barak A Cohen
Journal:  Cell Syst       Date:  2022-02-03       Impact factor: 11.091

10.  Lateral interactions between protofilaments of the bacterial tubulin homolog FtsZ are essential for cell division.

Authors:  Fenghui Guan; Jiayu Yu; Jie Yu; Yang Liu; Ying Li; Xin-Hua Feng; Kerwyn Casey Huang; Zengyi Chang; Sheng Ye
Journal:  Elife       Date:  2018-06-11       Impact factor: 8.140

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.