| Literature DB >> 36213916 |
Cheng Wan1, Wei Feng1, Renyi Ma1, Hui Ma2, Junjie Wang1, Ruochen Huang1, Xin Zhang1,3, Mang Jing3, Hao Yang2, Haoran Yu2, Yun Liu1,3.
Abstract
Objectives: Diabetes and its complications are commonly associated with depressive symptoms, and few studies have investigated the diagnosis effect of depressive symptoms in patients with diabetes. The present study used a network-based approach to explore the association between depressive symptoms, which are annotated from electronic health record (EHR) notes by a deep learning model, and the diagnosis of type 2 diabetes mellitus (T2DM) and its complications.Entities:
Keywords: depressive symptoms; diabetes complication; natural language processing; network analysis; type 2 diabetes mellitus
Year: 2022 PMID: 36213916 PMCID: PMC9543719 DOI: 10.3389/fpsyt.2022.966758
Source DB: PubMed Journal: Front Psychiatry ISSN: 1664-0640 Impact factor: 5.435
Figure 1Architecture of the T5-depression model with formatted input and output.
Descriptive statistics for each diseases in these windows of years.
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| Total, n | 8885 | 2619 | 1357 | 1693 | ||||||||
| Age, Mean (SD) | 60.36 (15.58) | 62.07 (13.03) | 66.06 (14.15) | 66.52 (13.92) | ||||||||
| Sex, n (%) | ||||||||||||
| Men | 5242 (59.00) | 0.0000*** | 1643 (62.73) | 0.0000*** | 911 (67.13) | 0.0000*** | 1051 (62.08) | 0.0000*** | ||||
| Women | 3643 (41.00) | 976 (37.27) | 446 (32.87) | 642 (37.92) | ||||||||
| Depression, n (%) | 81 (0.91) | 141 (1.59) | 0.0001*** | 21 (0.80) | 45 (1.72) | 0.0044** | 40 (2.95) | 31 (2.28) | 0.3360 | 55 (3.25) | 69 (4.08) | 0.2343 |
| Depressive Symptoms, n (%) | ||||||||||||
| Feeling tired | 1,569 (17.66) | 1,797 (20.23) | 0.0000*** | 555 (21.19) | 589 (22.49) | 0.2698 | 276 (20.34) | 287 (21.15) | 0.6359 | 531 (31.36) | 498 (29.42) | 0.2318 |
| Difficulty in sleeping | 1,225 (13.79) | 1,396 (15.71) | 0.0003*** | 443 (16.91) | 479 (18.29) | 0.2041 | 261 (19.23) | 278 (20.49) | 0.4414 | 345 (20.38) | 347 (20.50) | 0.9660 |
| A decrease in appetite | 1487 (16.74) | 1,735 (19.53) | 0.0000*** | 476 (18.17) | 554 (21.15) | 0.0074** | 235 (17.32) | 277 (20.41) | 0.0443* | 341 (20.14) | 335 (19.79) | 0.8298 |
| Moving slowly | 99 (1.11) | 155 (1.74) | 0.0005*** | 43 (1.64) | 54 (2.06) | 0.3054 | 14 (1.03) | 19 (1.40) | 0.4836 | 55 (3.25) | 73 (4.31) | 0.1256 |
| Feeling irritable | 47 (0.53) | 61 (0.69) | 0.2096 | 18 (0.69) | 22 (0.84) | 0.6340 | 12 (0.88) | 9 (0.66) | 0.6613 | 21 (1.24) | 26 (1.54) | 0.5568 |
| A decline in Memory/attention | 60 (0.68) | 89 (1.00) | 0.0212* | 25 (0.95) | 36 (1.37) | 0.1978 | 12 (0.88) | 15 (1.11) | 0.6989 | 48 (2.84) | 59 (3.48) | 0.3259 |
| A decrease in Weight | 1051 (11.83) | 1,138 (12.81) | 0.0496* | 417 (15.92) | 331 (12.64) | 0.0008** | 118 (8.70) | 137 (10.10) | 0.2363 | 182 (10.75) | 158 (9.33) | 0.1885 |
| An increase in Weight | 99 (1.11) | 179 (2.01) | 0.0000*** | 36 (1.37) | 55 (2.10) | 0.0570 | 15 (1.11) | 17 (1.25) | 0.8589 | 18 (1.06) | 23 (1.36) | 0.5297 |
| Feeling dispirited | 358 (4.03) | 472 (5.31) | 0.0001*** | 146 (5.57) | 160 (6.11) | 0.4438 | 77 (5.67) | 69 (5.08) | 0.5515 | 140 (8.27) | 148 (8.74) | 0.6663 |
For age, standard deviation is in parentheses, mean value is outside. For sex and depressive symptoms, percentage value is in parentheses, amount value is outside.
(–2, 0], within 2 years before diagnosed date of each disease; (0, 2], within 2 years after diagnosed date of each disease.
p, p-values from χ2-test; * <0.05; ** <0.01; *** <0.001.
Metrics for different models on Dataset I and II.
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| Rule-based | - | Dataset I - Train | 89.74 | 0.0226 | 95.99 | 79.83 | 87.17 |
| Dataset I - Test | 89.41 | 0.0242 | 95.39 | 79.23 | 86.57 | ||
| Dataset I - Validation | 89.41 | 0.0243 | 96.57 | 79.14 | 86.99 | ||
| Dataset II | 82.06 | 0.0263 | 92.91 | 64.45 | 76.11 | ||
| Roberta | hfl/chinese-roberta-wwm-ext ( | Dataset I - Train | 93.78 | 0.012 | 94.8 | 89.39 | 92.02 |
| Dataset I - Test | 93.21 | 0.0027 | 90.65 | 87.81 | 89.21 | ||
| Dataset I - Validation | 92.98 | 0.0028 | 90.59 | 85.88 | 88.17 | ||
| Dataset II | 89.32 | 0.0154 | 91.64 | 84.04 | 87.68 | ||
| Bert | bert-base-chinese | Dataset I - Train | 90.51 | 0.0173 | 91.72 | 85.39 | 88.44 |
| Dataset I - Test | 88.46 | 0.003 | 92.25 | 83 | 87.38 | ||
| Dataset I - Validation | 91.2 | 0.0031 | 91.12 | 83.07 | 86.91 | ||
| Dataset II | 88.38 | 0.0156 | 92.49 | 82.69 | 87.31 | ||
| T5-depression | Langboat/mengzi-t5-base ( | Dataset I - Train | 99.3 | 0.0021 | 99.16 | 98.7 | 98.93 |
| Dataset I - Test | 96.25 | 0.0166 | 89.84 | 93.65 | 91.71 | ||
| Dataset I - Validation | 95.37 | 0.0173 | 91.43 | 91.72 | 91.58 | ||
| Dataset II | 97.47 | 0.0058 | 95.83 | 95.23 | 95.53 |
P, Precision; R, Recall; F1, F-scores.
: https://huggingface.co/bert-base-chinese.
Comparison between network connectivity for each disease.
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| T2DM | 7.54 | 13.79 | 0.0250* | 81 | 141 | 0.0001*** |
| Hypertension | 4.60 | 13.47 | 0.0130* | 21 | 45 | 0.0044** |
| Ischaemic Heart Disease | 3.91 | 5.37 | 0.3250 | 40 | 31 | 0.3360 |
| Cerebrovascular Disease | 7.21 | 8.83 | 0.5860 | 55 | 69 | 0.2343 |
P-values in overall connectivity are computed from the Network Comparison Test.
(–2, 0], within 2 years before diagnosed date of each disease; (0, 2], within 2 years after diagnosed date of each disease.
* <0.05; ** <0.01; *** <0.001.
Figure 2Depressive symptom networks within 2 years before and after the diagnosis of T2DM and hypertension. Green lines represent positive association, and thicker lines represent stronger association. (A) is within 2 years before diagnosed date of T2DM. (B) is within 2 years after diagnosed date of T2DM. (C) is within 2 years before diagnosed date of hypertension. (D) is within 2 years after diagnosed date of hypertension.