| Literature DB >> 36213277 |
Liuqing Peng1, Jiarui Jing1, Simin He1, Juping Wang1, Xue Gao1, Tong Wang1.
Abstract
Objective: To explore whether total cholesterol (TC), high-density lipoprotein (HDL), low-density lipoprotein (LDL), and triglyceride (TG) are mediators in the pathway of body mass index (BMI) on serum urate and determine the proportion of the mediation effect.Entities:
Keywords: Mendelian randomization; body mass index (BMI); lipid traits; mediation analysis; serum urate
Mesh:
Substances:
Year: 2022 PMID: 36213277 PMCID: PMC9539818 DOI: 10.3389/fendo.2022.938891
Source DB: PubMed Journal: Front Endocrinol (Lausanne) ISSN: 1664-2392 Impact factor: 6.055
Figure 1The core assumptions of MR. Z represents the genetic instrument (SNPs), X the exposure (BMI, TC, HDL, LDL, and TG), Y the outcome (serum urate), and U denotes the confounders of the relationship of X–Y. Assumptions: 1. Genetic variation is closely related to the exposure of interest, γ ≠ 0; 2. Genetic variation has nothing to do with confounding, φ 1 = 0; 3. Genetic variation only affects the outcome through X, φ 2 = 0.
GWAS cohorts used in this study.
| Phenotype | First author (year) | Sample size | Consortium |
|---|---|---|---|
| BMI | Yengo (2018) | 681,275 | GIANT |
| TC | Willer (2013) | 187,365 | GLGC |
| HDL | Richardson (2020) | 403,943 | UK Biobank |
| LDL | Richardson (2020) | 440,546 | UK Biobank |
| TG | Richardson (2020) | 441,016 | UK Biobank |
| Serum urate | Kottgen (2013) | 110,347 | GUGC |
The results of observational mediation analysis.
| Estimation | 95% CI lower | 95% CI upper |
| |
|---|---|---|---|---|
| TC |
|
|
|
|
| ACME | 0.0059 | 0.0029 | 0.010 | <2 × 10−16 |
| ADE | 0.052 | 0.045 | 0.060 | <2 × 10−16 |
| Total effect | 0.058 | 0.051 | 0.060 | <2 × 10−16 |
| Prop.Mediated | 0.102 | 0.049 | 0.15 | <2 × 10−16 |
| LDL | ||||
| ACME | 0.00013 | −0.00020 | 0.000 | 0.44 |
| TG |
|
|
|
|
ACME, average causal mediation effect; ADE, average direct effect.
The sensitivity of observational mediation analysis.
| Estimation | 95% CI lower | 95% CI upper |
| |
|---|---|---|---|---|
| TC |
|
|
|
|
| ACME | 0.0065 | 0.0041 | 0.010 | <2 × 10−16 |
| ADE | 0.052 | 0.046 | 0.060 | <2 × 10−16 |
| Total effect | 0.059 | 0.054 | 0.060 | <2 × 10−16 |
| Prop.Mediated | 0.107 | 0.068 | 0.14 | <2 × 10−16 |
| LDL | ||||
| ACME | 0.00036 | −0.00025 | 0.000 | 0.26 |
| TG |
|
|
|
|
ACME, average causal mediation effect; ADE, average direct effect.
The effect of BMI on serum urate and lipid traits.
| Outcome | Method | nSNPs | Betas (95% CI) |
|
|---|---|---|---|---|
| Urate | IVW | 851 | 0.30 (0.25, 0.34) | 2.37 × 10−35 |
| MR-Egger | 851 | 0.34 (0.21, 0.48) | 6.06 × 10−7 | |
| Egger-intercept | −0.00076 | 0.45 | ||
| WME | 851 | 0.31 (0.25, 0.36) | 1.37 × 10−32 | |
| MR-PRESSO | 838 | 0.32 (0.29, 0.35) | 6.71 × 10−65 | |
| TC | IVW | 856 | −0.030 (−0.075, 0.015) | 0.18 |
| MR-Egger | 856 | −0.16 (−0.28, −0.042) | 0.0071 | |
| Egger-intercept | 0.0022 | 0.018 | ||
| WME | 856 | −0.039 (−0.078, 0.00020) | 0.054 | |
| MR-PRESSO | 820 | −0.029 (−0.070, 0.012) | 0.17 | |
| HDL | IVW | 964 | −0.30 (−0.32, −0.27) | 1.39 × 10−104 |
| MR-Egger | 964 | −0.31 (−0.38, −0.23) | 3.93 × 10−14 | |
| Egger-intercept | 0.00014 | 0.81 | ||
| WME | 964 | −0.29 (−0.31, −0.28) | 5.18 × 10−197 | |
| MR-PRESSO | 863 | −0.32 (−0.32, −0.30) | 1.69 × 10−203 | |
| LDL | IVW | 964 | −0.068 (−0.10, −0.034) | 9.45 × 10−5 |
| MR-Egger | 964 | −0.20 (−0.30, −0.098) | 1.04 × 10−4 | |
| Egger-intercept | 0.0020 | 0.0066 | ||
| WME | 964 | −0.060 (−0.079, −0.042) | 5.24 × 10−10 | |
| MR-PRESSO | 908 | −0.049 (−0.054, −0.035) | 4.40 × 10−12 | |
| TG | IVW | 964 | 0.21 (0.18, 0.25) | 1.15 × 10−39 |
| MR-Egger | 964 | 0.18 (0.091, 0.28) | 1.11 × 10−4 | |
| Egger-intercept | 0.00047 | 0.50 | ||
| WME | 964 | 0.23 (0.21, 0.245) | 5.62 × 10−105 | |
| MR-PRESSO | 853 | 0.25 (0.23, 0.27) | 4.36 × 10−142 |
Effect of lipid traits on serum urate.
| Exposure | Method | nSNPs | Betas (95% CI) |
|
|---|---|---|---|---|
| TC | IVW | 109 | −0.035 (−0.096, 0.026) | 0.26 |
| MR-Egger | 109 | 0.019 (−0.10, 0.14) | 0.75 | |
| Egger-intercept | −0.0029 | 0.31 | ||
| WME | 109 | −0.048 (−0.097, 0.001) | 0.055 | |
| MR-PRESSO | 101 | −0.020 (−0.077, 0.037) | 0.49 | |
| HDL | IVW | 208 | −0.090 (−0.14, −0.039) | 0.00047 |
| MR-Egger | 208 | −0.00056 (−0.074, 0.072) | 0.99 | |
| Egger-intercept | −0.0032 | 0.0013 | ||
| WME | 208 | −0.059 (−0.12, 0.00069) | 0.054 | |
| MR-PRESSO | 203 | −0.080 (−0.13, −0.035) | 0.00057 | |
| LDL | IVW | 79 | −0.0027 (−0.13, 0.12) | 0.97 |
| MR-Egger | 79 | 0.071 (−0.16, 0.30) | 0.55 | |
| Egger-intercept | −0.024 | 0.46 | ||
| WME | 79 | −0.043 (−0.14, 0.057) | 0.39 | |
| MR-PRESSO | 74 | −0.065 (−0.14, 0.0075) | 0.084 | |
| TG | IVW | 174 | 0.22 (0.15, 0.29) | 2.28 × 10−10 |
| MR-Egger | 174 | 0.11 (0.0024, 0.22) | 4.66 × 10−2 | |
| Egger-intercept | 0.0033 | 0.013 | ||
| WME | 174 | 0.15 (0.077, 0.23) | 1.73 × 10−4 | |
| MR-PRESSO | 164 | 0.19 (0.14, 0.24) | 1.84 × 10−10 |
Figure 2Forest plot of multivariable Mendelian randomization.
The results of reverse MR.
| Methods | nSNPs | Betas (95% CI) |
| |
|---|---|---|---|---|
| Urate–BMI | IVW | 25 | −0.022 (−0.054, 0.0092) | 0.16 |
| MR-Egger | 25 | |||
| Slope | −0.031 (−0.085, 0.022) | 0.26 | ||
| Intercept | 0.00097 | 0.68 | ||
| Urate–TC | IVW | 33 | 0.031 (−0.038, 0.10) | 0.38 |
| MR-Egger | 33 | |||
| Slope | 0.070 (−0.040, 0.18) | 0.22 | ||
| Intercept | −0.0045 | 0.38 | ||
| Urate–TG | IVW | 28 | 0.071 (−0.039, 0.18) | 0.21 |
| MR-Egger | 28 | |||
| Slope | −0.0069 (−0.18, 0.16) | 0.94 | ||
| Intercept | 0.0010 | 0.26 | ||
| Urate–HDL | IVW | 28 | −0.026 (−0.062, 0.010) | 0.16 |
| MR-Egger | 28 | |||
| Slope | 0.014 (−0.041, 0.068) | 0.63 | ||
| Intercept | −0.0051 | 0.074 | ||
| Urate–LDL | IVW | 28 | −0.0040 (−0.047, 0.039) | 0.86 |
| MR-Egger | 28 | |||
| Slope | 0.030 (−0.037, 0.097) | 0.38 | ||
| Intercept | −0.0044 | 0.20 |
The Bonferroni method was used to correct the significance level of the causal association between exposures and serum urate, with p<0.0056 (0.05/9) being statistically significant.