Literature DB >> 36212525

pH-dependent concatenation of an inorganic complex results in solid state helix formation.

Emily Hoffer1, Brian P Niebuhr1, Kristof Pota1, Timothy M Schwartz1, Marianne E Burnett1, Timothy J Prior2, Horst Puschmann3, Kayla N Green1.   

Abstract

Growth of the library of tetraaza macrocyclic pyridinophane ligands is a result of the potential to treat neurodegenerative diseases by binding unregulated redox active metal-ions, scavenging radicals, and reducing oxidative stress. As part of this work, the copper complex of OH PyN 3 Cu (3,6,9,15-tetraazabicyclo[9.3.1]penta-deca-1(15),11,13-trien-13-ol) was previously identified as a discrete molecule in the solid state when isolated at lower pH values. However, here we report that OH PyN 3 Cu forms a helical structure upon crystallization around pH 6.5. Several properties of the ligand and complex were evaluated to understand the driving forces that led to the concatenation and formation of this solid-state helix. DFT studies along with a comparison of keto/enol tautomerization stability and bond lengths were used to determine the keto-character of the C=O within each subunit. This pH dependent keto-enol tautomerization is responsible for the solid state intermolecular C=O···Cu bonds observed in this metallohelix (Cu1 H ) when produced around pH 6.5. Perchlorate templating that occurs through hydrogen bonding between perchlorate counter ions and each Cu1 H unit is the primary driving factor for the twist that leads to the helix structure. Cu1 H does not exhibit the typical factors that stabilize the formation of helices, such as intra-strand hydrogen bonding or π-stacking. The helix structure further highlights the diversity of inorganic metallohelices and demonstrates the importance of tautomerization and pH that occurs with the pyridinophane ligand used in this study. To our knowledge and although these phenomenon have been observed individually, this is the first example of a pH dependent keto-enol tautomerization in an azamacrocycle being the driving force for the formation of a metallohelix solid state structure and is a particularly unique observation for pyridinophane complexes.

Entities:  

Year:  2021        PMID: 36212525      PMCID: PMC9542219          DOI: 10.1016/j.ica.2021.120740

Source DB:  PubMed          Journal:  Inorganica Chim Acta        ISSN: 0020-1693            Impact factor:   3.118


  16 in total

1.  Polymorphs of p-nitrophenol as studied by variable-temperature X-ray diffraction and calorimetry: comparison with m-nitrophenol.

Authors:  Grazyna Wójcik; Izabela Mossakowska
Journal:  Acta Crystallogr B       Date:  2006-01-17

2.  Universal solvation model based on solute electron density and on a continuum model of the solvent defined by the bulk dielectric constant and atomic surface tensions.

Authors:  Aleksandr V Marenich; Christopher J Cramer; Donald G Truhlar
Journal:  J Phys Chem B       Date:  2009-05-07       Impact factor: 2.991

3.  Long-range corrected hybrid density functionals with damped atom-atom dispersion corrections.

Authors:  Jeng-Da Chai; Martin Head-Gordon
Journal:  Phys Chem Chem Phys       Date:  2008-09-29       Impact factor: 3.676

4.  Interlocking inorganic screw helices: synthesis, structure, and magnetism of the novel framework uranium orthothiophoshates A11U7(PS4)13 (A = K, Rb).

Authors:  Christine Gieck; Wolfgang Tremel
Journal:  Chemistry       Date:  2002-07-02       Impact factor: 5.236

5.  Dialing in on pharmacological features for a therapeutic antioxidant small molecule.

Authors:  Kayla N Green; Kristof Pota; Gyula Tircsó; Réka Anna Gogolák; Olivia Kinsinger; Collin Davda; Kimberly Blain; Samantha M Brewer; Paulina Gonzalez; Hannah M Johnston; Giridhar Akkaraju
Journal:  Dalton Trans       Date:  2019-07-25       Impact factor: 4.390

6.  Enhancement of the Antioxidant Activity and Neurotherapeutic Features through Pyridol Addition to Tetraazamacrocyclic Molecules.

Authors:  Hannah M Johnston; Kristof Pota; Madalyn M Barnett; Olivia Kinsinger; Paige Braden; Timothy M Schwartz; Emily Hoffer; Nishanth Sadagopan; Nam Nguyen; Yu Yu; Paulina Gonzalez; Gyula Tircsó; Hongli Wu; Giridhar Akkaraju; Michael J Chumley; Kayla N Green
Journal:  Inorg Chem       Date:  2019-11-27       Impact factor: 5.165

7.  Pseudopolymorphs of chelidamic acid and its dimethyl ester.

Authors:  Maya Tutughamiarso; Thorsten Pisternick; Ernst Egert
Journal:  Acta Crystallogr C       Date:  2012-08-01       Impact factor: 1.172

8.  Structural, spectral, and electrochemical properties of nickel(II), copper(II), and zinc(II) complexes containing 12-membered pyridine- and pyridol-based tetra-aza macrocycles.

Authors:  Kimberly M Lincoln; Michael E Offutt; Travis D Hayden; Ryker E Saunders; Kayla N Green
Journal:  Inorg Chem       Date:  2014-01-17       Impact factor: 5.165

9.  Spontaneous assembly of double-stranded helicates from oligobipyridine ligands and copper(I) cations: structure of an inorganic double helix.

Authors:  J M Lehn; A Rigault; J Siegel; J Harrowfield; B Chevrier; D Moras
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

10.  A quasi-tetrahedral Cu4 cluster and a helical-chain copper (II) complex with single syn-anti carboxylate bridges: crystal structure and magnetic properties.

Authors:  Subrata Kumar Dey; Bappaditya Bag; K M Abdul Malik; M Salah El Fallah; Joan Ribas; Samiran Mitra
Journal:  Inorg Chem       Date:  2003-06-30       Impact factor: 5.165

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