Literature DB >> 36204419

Path analysis: A method to estimate altered pathways in time-varying graphs of neuroimaging data.

Haleh Falakshahi1,2, Hooman Rokham1,2, Zening Fu1, Armin Iraji1, Daniel H Mathalon3,4, Judith M Ford3,4, Bryon A Mueller5, Adrian Preda6, Theo G M van Erp6,7, Jessica A Turner1,8, Sergey Plis1,9, Vince D Calhoun1,2,9.   

Abstract

Graph-theoretical methods have been widely used to study human brain networks in psychiatric disorders. However, the focus has primarily been on global graphic metrics with little attention to the information contained in paths connecting brain regions. Details of disruption of these paths may be highly informative for understanding disease mechanisms. To detect the absence or addition of multistep paths in the patient group, we provide an algorithm estimating edges that contribute to these paths with reference to the control group. We next examine where pairs of nodes were connected through paths in both groups by using a covariance decomposition method. We apply our method to study resting-state fMRI data in schizophrenia versus controls. Results show several disconnectors in schizophrenia within and between functional domains, particularly within the default mode and cognitive control networks. Additionally, we identify new edges generating additional paths. Moreover, although paths exist in both groups, these paths take unique trajectories and have a significant contribution to the decomposition. The proposed path analysis provides a way to characterize individuals by evaluating changes in paths, rather than just focusing on the pairwise relationships. Our results show promise for identifying path-based metrics in neuroimaging data.
© 2022 Massachusetts Institute of Technology.

Entities:  

Keywords:  Brain graph; Functional connectivity; Gaussian graphical model; Joint estimation; Resting-state fMRI; Schizophrenia

Year:  2022        PMID: 36204419      PMCID: PMC9531579          DOI: 10.1162/netn_a_00247

Source DB:  PubMed          Journal:  Netw Neurosci        ISSN: 2472-1751


  54 in total

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Authors:  G D Pearlson
Journal:  Prog Neuropsychopharmacol Biol Psychiatry       Date:  1997-11       Impact factor: 5.067

2.  Shared and distinct intrinsic functional network centrality in autism and attention-deficit/hyperactivity disorder.

Authors:  Adriana Di Martino; Xi-Nian Zuo; Clare Kelly; Rebecca Grzadzinski; Maarten Mennes; Ariel Schvarcz; Jennifer Rodman; Catherine Lord; F Xavier Castellanos; Michael P Milham
Journal:  Biol Psychiatry       Date:  2013-03-28       Impact factor: 13.382

3.  Equal numbers of neuronal and nonneuronal cells make the human brain an isometrically scaled-up primate brain.

Authors:  Frederico A C Azevedo; Ludmila R B Carvalho; Lea T Grinberg; José Marcelo Farfel; Renata E L Ferretti; Renata E P Leite; Wilson Jacob Filho; Roberto Lent; Suzana Herculano-Houzel
Journal:  J Comp Neurol       Date:  2009-04-10       Impact factor: 3.215

4.  Abnormal thalamocortical network dynamics in migraine.

Authors:  Yiheng Tu; Zening Fu; Fang Zeng; Nasim Maleki; Lei Lan; Zhengjie Li; Joel Park; Georgia Wilson; Yujie Gao; Mailan Liu; Vince Calhoun; Fanrong Liang; Jian Kong
Journal:  Neurology       Date:  2019-05-10       Impact factor: 9.910

5.  A method for evaluating dynamic functional network connectivity and task-modulation: application to schizophrenia.

Authors:  Unal Sakoğlu; Godfrey D Pearlson; Kent A Kiehl; Y Michelle Wang; Andrew M Michael; Vince D Calhoun
Journal:  MAGMA       Date:  2010-02-17       Impact factor: 2.310

6.  Dynamic state with covarying brain activity-connectivity: On the pathophysiology of schizophrenia.

Authors:  Zening Fu; Armin Iraji; Jessica A Turner; Jing Sui; Robyn Miller; Godfrey D Pearlson; Vince D Calhoun
Journal:  Neuroimage       Date:  2020-09-17       Impact factor: 6.556

7.  Dynamic functional connectivity analysis reveals transient states of dysconnectivity in schizophrenia.

Authors:  E Damaraju; E A Allen; A Belger; J M Ford; S McEwen; D H Mathalon; B A Mueller; G D Pearlson; S G Potkin; A Preda; J A Turner; J G Vaidya; T G van Erp; V D Calhoun
Journal:  Neuroimage Clin       Date:  2014-07-24       Impact factor: 4.881

8.  A Statistical Test for Differential Network Analysis Based on Inference of Gaussian Graphical Model.

Authors:  Hao He; Shaolong Cao; Ji-Gang Zhang; Hui Shen; Yu-Ping Wang; Hong-Wen Deng
Journal:  Sci Rep       Date:  2019-07-26       Impact factor: 4.379

9.  Tools of the trade: estimating time-varying connectivity patterns from fMRI data.

Authors:  Armin Iraji; Ashkan Faghiri; Noah Lewis; Zening Fu; Srinivas Rachakonda; Vince D Calhoun
Journal:  Soc Cogn Affect Neurosci       Date:  2021-08-05       Impact factor: 3.436

10.  Meta-Modal Information Flow: A Method for Capturing Multimodal Modular Disconnectivity in Schizophrenia.

Authors:  Haleh Falakshahi; Victor M Vergara; Jingyu Liu; Daniel H Mathalon; Judith M Ford; James Voyvodic; Bryon A Mueller; Aysenil Belger; Sarah McEwen; Steven G Potkin; Adrian Preda; Hooman Rokham; Jing Sui; Jessica A Turner; Sergey Plis; Vince D Calhoun
Journal:  IEEE Trans Biomed Eng       Date:  2020-01-07       Impact factor: 4.538

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