Literature DB >> 36200032

Interstitial deletions in the proximal regions of 6q: 12 original cases and a literature review.

Osamu Machida1,2, Keiko Yamamoto Shimojima3,4, Takashi Shiihara5, Satoshi Akamine6, Ryutaro Kira6, Yuiko Hasegawa7, Eriko Nishi7, Nobuhiko Okamoto7, Satoru Nagata2, Toshiyuki Yamamoto1,4.   

Abstract

Interstitial microdeletions in the proximal region of the long arm of chromosome 6 are rare. Herein we have reported 12 patients with developmental delays associated with interstitial microdeletions in 6q ranging from q12 to q22. The microdeletions were detected by chromosomal microarray testing. To confirm the clinical significance of these deletions, genotype-phenotype correlation analysis was performed using genetic and predicted loss-of-function data. SIM1 was recognized as the gene responsible for developmental delay, particularly in Prader-Willi syndrome-like phenotypes. Other genes possibly related to developmental delay were ZNF292, PHIP, KCNQ5, and NUS1. To further establish the correlation between the genotype and phenotype, more patient information is required. 2022, International Research and Cooperation Association for Bio & Socio - Sciences Advancement.

Entities:  

Keywords:  6q interstitial deletions; chromosomal microarray testing; developmental delay

Year:  2022        PMID: 36200032      PMCID: PMC9438003          DOI: 10.5582/irdr.2022.01065

Source DB:  PubMed          Journal:  Intractable Rare Dis Res        ISSN: 2186-3644


  23 in total

1.  Loss-of-Function and Gain-of-Function Mutations in KCNQ5 Cause Intellectual Disability or Epileptic Encephalopathy.

Authors:  Anna Lehman; Samrat Thouta; Grazia M S Mancini; Sakkubai Naidu; Marjon van Slegtenhorst; Kirsty McWalter; Richard Person; Jill Mwenifumbo; Ramona Salvarinova; Ilaria Guella; Marna B McKenzie; Anita Datta; Mary B Connolly; Somayeh Mojard Kalkhoran; Damon Poburko; Jan M Friedman; Matthew J Farrer; Michelle Demos; Sonal Desai; Thomas Claydon
Journal:  Am J Hum Genet       Date:  2017-06-29       Impact factor: 11.025

2.  Genotype-phenotype correlation in interstitial 6q deletions: a report of 12 new cases.

Authors:  Jill A Rosenfeld; Dina Amrom; Eva Andermann; Frederick Andermann; Martin Veilleux; Cynthia Curry; Jamie Fisher; Stephen Deputy; Arthur S Aylsworth; Cynthia M Powell; Kandamurugu Manickam; Bryce Heese; Melissa Maisenbacher; Cathy Stevens; Jay W Ellison; Sheila Upton; John Moeschler; Wilfredo Torres-Martinez; Abby Stevens; Robert Marion; Elaine Maria Pereira; Melanie Babcock; Bernice Morrow; Trilochan Sahoo; Allen N Lamb; Blake C Ballif; Alex R Paciorkowski; Lisa G Shaffer
Journal:  Neurogenetics       Date:  2012-01-05       Impact factor: 2.660

Review 3.  Interstitial 6q microdeletion syndrome and epilepsy: a new patient and review of the literature.

Authors:  Aglaia Vignoli; Giulia Federica Scornavacca; Angela Peron; Francesca La Briola; Maria Paola Canevini
Journal:  Am J Med Genet A       Date:  2013-06-21       Impact factor: 2.802

4.  Interstitial deletions of chromosome 6q: genotype-phenotype correlation utilizing array CGH.

Authors:  O D Klein; P D Cotter; M W Moore; A Zanko; M Gilats; C J Epstein; F Conte; K A Rauen
Journal:  Clin Genet       Date:  2007-03       Impact factor: 4.438

5.  No preferential mode of inheritance for highly constrained genes.

Authors:  Alexandre Fabre; Julien Mancini
Journal:  Intractable Rare Dis Res       Date:  2022-02

6.  Endocrine phenotype of 6q16.1-q21 deletion involving SIM1 and Prader-Willi syndrome-like features.

Authors:  Kosuke Izumi; Ryan Housam; Chirag Kapadia; Virginia A Stallings; Livija Medne; Tamim H Shaikh; Bassil M Kublaoui; Elaine H Zackai; Adda Grimberg
Journal:  Am J Med Genet A       Date:  2013-08-16       Impact factor: 2.802

7.  High Rate of Recurrent De Novo Mutations in Developmental and Epileptic Encephalopathies.

Authors:  Fadi F Hamdan; Candace T Myers; Patrick Cossette; Philippe Lemay; Dan Spiegelman; Alexandre Dionne Laporte; Christina Nassif; Ousmane Diallo; Jean Monlong; Maxime Cadieux-Dion; Sylvia Dobrzeniecka; Caroline Meloche; Kyle Retterer; Megan T Cho; Jill A Rosenfeld; Weimin Bi; Christine Massicotte; Marguerite Miguet; Ledia Brunga; Brigid M Regan; Kelly Mo; Cory Tam; Amy Schneider; Georgie Hollingsworth; David R FitzPatrick; Alan Donaldson; Natalie Canham; Edward Blair; Bronwyn Kerr; Andrew E Fry; Rhys H Thomas; Joss Shelagh; Jane A Hurst; Helen Brittain; Moira Blyth; Robert Roger Lebel; Erica H Gerkes; Laura Davis-Keppen; Quinn Stein; Wendy K Chung; Sara J Dorison; Paul J Benke; Emily Fassi; Nicole Corsten-Janssen; Erik-Jan Kamsteeg; Frederic T Mau-Them; Ange-Line Bruel; Alain Verloes; Katrin Õunap; Monica H Wojcik; Dara V F Albert; Sunita Venkateswaran; Tyson Ware; Dean Jones; Yu-Chi Liu; Shekeeb S Mohammad; Peyman Bizargity; Carlos A Bacino; Vincenzo Leuzzi; Simone Martinelli; Bruno Dallapiccola; Marco Tartaglia; Lubov Blumkin; Klaas J Wierenga; Gabriela Purcarin; James J O'Byrne; Sylvia Stockler; Anna Lehman; Boris Keren; Marie-Christine Nougues; Cyril Mignot; Stéphane Auvin; Caroline Nava; Susan M Hiatt; Martina Bebin; Yunru Shao; Fernando Scaglia; Seema R Lalani; Richard E Frye; Imad T Jarjour; Stéphanie Jacques; Renee-Myriam Boucher; Emilie Riou; Myriam Srour; Lionel Carmant; Anne Lortie; Philippe Major; Paola Diadori; François Dubeau; Guy D'Anjou; Guillaume Bourque; Samuel F Berkovic; Lynette G Sadleir; Philippe M Campeau; Zoha Kibar; Ronald G Lafrenière; Simon L Girard; Saadet Mercimek-Mahmutoglu; Cyrus Boelman; Guy A Rouleau; Ingrid E Scheffer; Heather C Mefford; Danielle M Andrade; Elsa Rossignol; Berge A Minassian; Jacques L Michaud
Journal:  Am J Hum Genet       Date:  2017-11-02       Impact factor: 11.025

8.  BACH2 immunodeficiency illustrates an association between super-enhancers and haploinsufficiency.

Authors:  Behdad Afzali; Juha Grönholm; Jana Vandrovcova; Charlotte O'Brien; Hong-Wei Sun; Ine Vanderleyden; Fred P Davis; Ahmad Khoder; Yu Zhang; Ahmed N Hegazy; Alejandro V Villarino; Ira W Palmer; Joshua Kaufman; Norman R Watts; Majid Kazemian; Olena Kamenyeva; Julia Keith; Anwar Sayed; Dalia Kasperaviciute; Michael Mueller; Jason D Hughes; Ivan J Fuss; Mohammed F Sadiyah; Kim Montgomery-Recht; Joshua McElwee; Nicholas P Restifo; Warren Strober; Michelle A Linterman; Paul T Wingfield; Holm H Uhlig; Rahul Roychoudhuri; Timothy J Aitman; Peter Kelleher; Michael J Lenardo; John J O'Shea; Nichola Cooper; Arian D J Laurence
Journal:  Nat Immunol       Date:  2017-05-22       Impact factor: 25.606

9.  De novo and inherited variants in ZNF292 underlie a neurodevelopmental disorder with features of autism spectrum disorder.

Authors:  Ghayda M Mirzaa; Jessica X Chong; Amélie Piton; Bernt Popp; Kimberly Foss; Hui Guo; Ricardo Harripaul; Kun Xia; Joshua Scheck; Kimberly A Aldinger; Samin A Sajan; Sha Tang; Dominique Bonneau; Anita Beck; Janson White; Sonal Mahida; Jacqueline Harris; Constance Smith-Hicks; Juliane Hoyer; Christiane Zweier; André Reis; Christian T Thiel; Rami Abou Jamra; Natasha Zeid; Amy Yang; Laura S Farach; Laurence Walsh; Katelyn Payne; Luis Rohena; Milen Velinov; Alban Ziegler; Elise Schaefer; Vincent Gatinois; David Geneviève; Marleen E H Simon; Jennefer Kohler; Joshua Rotenberg; Patricia Wheeler; Austin Larson; Michelle E Ernst; Cigdem I Akman; Rachel Westman; Patricia Blanchet; Lori-Anne Schillaci; Catherine Vincent-Delorme; Karen W Gripp; Francesca Mattioli; Gwenaël Le Guyader; Bénédicte Gerard; Michèle Mathieu-Dramard; Gilles Morin; Roksana Sasanfar; Muhammad Ayub; Nasim Vasli; Sandra Yang; Rick Person; Kristin G Monaghan; Deborah A Nickerson; Ellen van Binsbergen; Gregory M Enns; Annika M Dries; Leah J Rowe; Anne C H Tsai; Shayna Svihovec; Jennifer Friedman; Zehra Agha; Raheel Qamar; Lance H Rodan; Julian Martinez-Agosto; Charlotte W Ockeloen; Marie Vincent; William James Sunderland; Jonathan A Bernstein; Evan E Eichler; John B Vincent; Michael J Bamshad
Journal:  Genet Med       Date:  2019-11-14       Impact factor: 8.822

10.  Loss-of-function mutations in SIM1 contribute to obesity and Prader-Willi-like features.

Authors:  Amélie Bonnefond; Anne Raimondo; Fanny Stutzmann; Maya Ghoussaini; Shwetha Ramachandrappa; David C Bersten; Emmanuelle Durand; Vincent Vatin; Beverley Balkau; Olivier Lantieri; Violeta Raverdy; François Pattou; Wim Van Hul; Luc Van Gaal; Daniel J Peet; Jacques Weill; Jennifer L Miller; Fritz Horber; Anthony P Goldstone; Daniel J Driscoll; John B Bruning; David Meyre; Murray L Whitelaw; Philippe Froguel
Journal:  J Clin Invest       Date:  2013-06-17       Impact factor: 14.808

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