Literature DB >> 36199437

CONTROL-CORE: A Framework for Simulation and Design of Closed-Loop Peripheral Neuromodulation Control Systems.

Pradeeban Kathiravelu1, Mark Arnold2, Jake Fleischer2, Yuyu Yao2, Shubham Awasthi3, Aviral Kumar Goel4, Andrew Branen5, Parisa Sarikhani1, Gautam Kumar5, Mayuresh V Kothare2, Babak Mahmoudi1,6.   

Abstract

Closed-loop Vagus Nerve Stimulation (VNS) based on physiological feedback signals is a promising approach to regulate organ functions and develop therapeutic devices. Designing closed-loop neurostimulation systems requires simulation environments and computing infrastructures that support i) modeling the physiological responses of organs under neuromodulation, also known as physiological models, and ii) the interaction between the physiological models and the neuromodulation control algorithms. However, existing simulation platforms do not support closed-loop VNS control systems modeling without extensive rewriting of computer code and manual deployment and configuration of programs. The CONTROL-CORE project aims to develop a flexible software platform for designing and implementing closed-loop VNS systems. This paper proposes the software architecture and the elements of the CONTROL-CORE platform that allow the interaction between a controller and a physiological model in feedback. CONTROL-CORE facilitates modular simulation and deployment of closed-loop peripheral neuromodulation control systems, spanning multiple organizations securely and concurrently. CONTROL-CORE allows simulations to run on different operating systems, be developed in various programming languages (such as Matlab, Python, C++, and Verilog), and be run locally, in containers, and in a distributed fashion. The CONTROL-CORE platform allows users to create tools and testbenches to facilitate sophisticated simulation experiments. We tested the CONTROL-CORE platform in the context of closed-loop control of cardiac physiological models, including pulsatile and nonpulsatile rat models. These were tested using various controllers such as Model Predictive Control and Long-Short-Term Memory based controllers. Our wide range of use cases and evaluations show the performance, flexibility, and usability of the CONTROL-CORE platform.

Entities:  

Keywords:  Closed-loop simulations; neuromodulation control systems; workflows

Year:  2022        PMID: 36199437      PMCID: PMC9531851          DOI: 10.1109/access.2022.3161471

Source DB:  PubMed          Journal:  IEEE Access        ISSN: 2169-3536            Impact factor:   3.476


  14 in total

1.  Long short-term memory.

Authors:  S Hochreiter; J Schmidhuber
Journal:  Neural Comput       Date:  1997-11-15       Impact factor: 2.026

2.  Memory-Event-Triggered H∞ Output Control of Neural Networks With Mixed Delays.

Authors:  Shen Yan; Zhou Gu; Sing Kiong Nguang
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2021-06-04       Impact factor: 10.451

3.  An Enhanced Device-Transparent Real-Time Teleconsultation Environment for Radiologists.

Authors:  Christos Andrikos; Georgios Rassias; Panayiotis Tsanakas; Ilias Maglogiannis
Journal:  IEEE J Biomed Health Inform       Date:  2018-04-09       Impact factor: 5.772

4.  The Dockstore: enabling modular, community-focused sharing of Docker-based genomics tools and workflows.

Authors:  Brian D O'Connor; Denis Yuen; Vincent Chung; Andrew G Duncan; Xiang Kun Liu; Janice Patricia; Benedict Paten; Lincoln Stein; Vincent Ferretti
Journal:  F1000Res       Date:  2017-01-18

5.  CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language.

Authors:  Michael Kotliar; Andrey V Kartashov; Artem Barski
Journal:  Gigascience       Date:  2019-07-01       Impact factor: 6.524

Review 6.  Gastrointestinal diseases of the ferret.

Authors:  Angela M Lennox
Journal:  Vet Clin North Am Exot Anim Pract       Date:  2005-05

7.  The Stroke Neuro-Imaging Phenotype Repository: An Open Data Science Platform for Stroke Research.

Authors:  Hossein Mohammadian Foroushani; Rajat Dhar; Yasheng Chen; Jenny Gurney; Ali Hamzehloo; Jin-Moo Lee; Daniel S Marcus
Journal:  Front Neuroinform       Date:  2021-06-24       Impact factor: 3.739

8.  A translational platform for prototyping closed-loop neuromodulation systems.

Authors:  Pedram Afshar; Ankit Khambhati; Scott Stanslaski; David Carlson; Randy Jensen; Dave Linde; Siddharth Dani; Maciej Lazarewicz; Peng Cong; Jon Giftakis; Paul Stypulkowski; Tim Denison
Journal:  Front Neural Circuits       Date:  2013-01-22       Impact factor: 3.492

9.  The SPARC DRC: Building a Resource for the Autonomic Nervous System Community.

Authors:  Mahyar Osanlouy; Anita Bandrowski; Bernard de Bono; David Brooks; Antonino M Cassarà; Richard Christie; Nazanin Ebrahimi; Tom Gillespie; Jeffrey S Grethe; Leonardo A Guercio; Maci Heal; Mabelle Lin; Niels Kuster; Maryann E Martone; Esra Neufeld; David P Nickerson; Elias G Soltani; Susan Tappan; Joost B Wagenaar; Katie Zhuang; Peter J Hunter
Journal:  Front Physiol       Date:  2021-06-24       Impact factor: 4.566

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