Literature DB >> 36198873

Ploidy Identification by Flow Cytometry and Application of the Method to Characterize Seasonal Ploidy Variation of Wild Populations of the Red Alga Gracilariopsis lemaneiformis.

Xiaoqing Feng1, Haihong Chen1, Baoheng Xiao1, Qiong Wu1, Jingyu Zhang1, Ni Zhang1, Pingping Li1, Lu Wang1, Jingru Yin1, Zhenghong Sui2.   

Abstract

Gracilariopsis lemaneiformis (Gp. lemaneiformis) is an economically important alga. At present, there is no way to quickly and easily determine its ploidy and life cycle dynamics in wild populations, which affects the process of genetic breeding. In this study, we developed and verified a ploidy identification method using flow cytometry and then used it to explore the seasonal fluctuation of the ploidy ratio and the environmental factors that influence it in wild populations of this species. Of the three methods we tested for nucleus extraction, quick chopping was the best because of its high extraction efficiency, low debris background, obvious subcellular scatter plot, and clear typical histogram. Samples from the tip of the alga were more suitable for preparing the nuclear suspension than samples from the base. Generalized linear model analysis based on diagnosis of multicollinearity revealed a negative correlation between temperature and ploidy ratio. Among the environmental factors tested, temperature had the greatest influence on the ploidy ratio, whereas precipitation and sunshine duration had no effect on the ploidy ratio fluctuation. Our study will be useful for material collection and studies of utilization and life cycle dynamics. Moreover, understanding of ploidy dynamics may provide a theoretical basis for improving variety and breeding of Gp. lemaneiformis in the future.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Environmental factor; Flow cytometry; Gracilariopsis lemaneiformis; Nuclear suspension; Ploidy ratio

Year:  2022        PMID: 36198873     DOI: 10.1007/s10126-022-10167-3

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.727


  22 in total

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Journal:  Evolution       Date:  2008-03-12       Impact factor: 3.694

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Authors:  D W Galbraith
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8.  Estimating the ploidy of Gracilariopsis lemaneiformis at both the cellular and genomic level1.

Authors:  Haihong Chen; Xiaoqing Feng; Minjie Jiang; Baoheng Xiao; Jingyu Zhang; Wei Zhang; Yiyi Hu; Zhenghong Sui
Journal:  J Phycol       Date:  2020-06-19       Impact factor: 2.923

9.  Polyploidy Affects Plant Growth and Alters Cell Wall Composition.

Authors:  Sander Corneillie; Nico De Storme; Rebecca Van Acker; Jonatan U Fangel; Michiel De Bruyne; Riet De Rycke; Danny Geelen; William G T Willats; Bartel Vanholme; Wout Boerjan
Journal:  Plant Physiol       Date:  2018-10-09       Impact factor: 8.340

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Authors:  Maïté S Guignard; Richard A Nichols; Robert J Knell; Andy Macdonald; Catalina-Andreea Romila; Mark Trimmer; Ilia J Leitch; Andrew R Leitch
Journal:  New Phytol       Date:  2016-02-15       Impact factor: 10.151

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