Literature DB >> 36197199

A bibliometric analysis of the top 100 most cited papers and research trends in breast cancer related BRCA1 and BRCA2 genes.

Shadi Alkhayyat1, Muhammad Khan2, Tauseef Ahmad3,4, Huma Tariq5, Mukhtiar Baig6.   

Abstract

This study aimed to identify, characterize, and map the important attributes of the top 100 most cited papers on BRCA1 and BRCA2 genes. The scientific literature on BRCA1 and BRCA2 was searched in the Web of Science Core Collection database using the keywords "BRCA1" OR "BRCA2" (Title). The top 100 most cited papers were selected based on citations. The obtained data were exported into HistCiteTM, RStudio, and VOSviewer software for prerequisite analysis. The top 100 most cited papers on BRCA1 and BRCA2 were authored by 932 authors from 24 countries and published in 27 journals. These papers were cited 79,713 times, ranging from 441 to 4671 citations. The highly cited paper was cited 4671 times and published in Science (1994). The leading author, journal, publication year, institution, and country were Easton DF (n = 16), Nature Genetics (n = 11), 2002 (n = 11), University of Pennsylvania (n = 17), and the USA (n = 76), respectively. The results show that all the top 100 papers were produced in developed countries. The collaboration index among the authors was 9.49. The most frequently appeared keywords were ovarian-cancer, breast-cancer, mutations, gene, and familial breast. In recent times, the trend topics were patients, mutations, carriers, ovarian, and risk.
Copyright © 2022 the Author(s). Published by Wolters Kluwer Health, Inc.

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Year:  2022        PMID: 36197199      PMCID: PMC9509046          DOI: 10.1097/MD.0000000000030576

Source DB:  PubMed          Journal:  Medicine (Baltimore)        ISSN: 0025-7974            Impact factor:   1.817


1. Introduction

Breast cancer, the most frequently diagnosed and reported cause of death, threatens women’s health in many countries.[ Certain factors play an important role in protecting against breast cancer development, including late menarche and more nursing duration.[ Ovarian hormone exposure, the number of ovulatory cycles, and breast lobular differentiation are suggested to reduce the occurrence of breast cancer.[ Researchers have evaluated the effects of reproductive factors on BRCA-related breast cancer, but the results are conflicting and differ by mutations either in BRCA1 or BRCA2.[ Few studies suggest no impact of breastfeeding on breast cancer development, but few have reported its protective effect on breast cancer risk in BRCA1 carriers.[ Breastfeeding did not show any impact on breast cancer risk in BRCA2 mutation carriers.[ In 2020, 2.3 million women were diagnosed with breast cancer, and it caused 685,000 deaths worldwide. At the end of 2020, 7.8 million women living with breast cancer ranked it the most prevalent cancer globally.[ Breast cancer and recent trends in its research are topics of prime importance.[ The importance of quantitative and qualitative assessment of the available scientific literature in this field has increased. Such assessments can play a key role in funding concerning research projects and resource priority setting, as demonstrated in the Research Assessment Exercise.[ The bibliometric analysis introduces a review process that allows the published research to be better described, evaluated, and monitored. It covers quantitative and visual processes in scientific publications to define their characteristics and dynamics. Bibliometric studies are either evaluation or relational studies. Evaluation studies estimate the number of cited papers and total citations. Relational studies talk about the structure of a research issue, research profiling of authors, institutional affiliations, new research avenues, and scientific techniques employed. Appropriate interpretation is very important in bibliometric studies.[ The present study aims to identify and analyze the top 100 most cited papers in BRCA1 and BRCA2 associated breast and ovarian cancers worldwide using comprehensive data analysis and bibliometric tools. Furthermore, this study can help researchers and policymakers devise policies regarding the diagnosis and treatment of breast and ovarian cancers.

2. Methods

2.1. Study design

A descriptive bibliometric study was conducted.

2.2. Search strategy and database

A comprehensive review and discussion regarding the topic took place before conducting the online search to decide the retrieval database and potential search keywords. On June 07, 2021, the online search was performed through the Web of Science Core Collection (WoSCC) database hosted by Clarivate Analytics (https://clarivate.com/webofsciencegroup/solutions/web-of-science/), previously the Intellectual Property and Science business of Thomson Reuters, Philadelphia, Pennsylvania, USA (Fig. 1).
Figure 1.

Study flow chart.

Study flow chart. The WoSCC database is the world’s oldest database.[ Previously published studies in different research fields utilized WoSCC databases.[ The WoSCC database was accessed through the online library portal of Southeast University, Nanjing, China (http://www.lib.seu.edu.cn/). The potential search keywords were entered in the database search engine using Boolean search operators “BRCA1” OR “BRCA2” in the title field without restrictions.

2.3. Selection of publications

Researchers in this study independently screened the retrieved documents to identify the top 100 most cited publications on BRCA1- and BRCA2-related breast and ovarian cancer. The disagreements were resolved after a discussion with the third researcher. Only publications that focused on BRCA1 and BRCA2 causing breast and ovarian cancer were included in the final analysis. The top 100 most cited publications were identified based on the number of global citation score (GCS) in descending order, and publications that had more citations were ranked higher.

2.4. Extraction of data

A self-designed electronic data form was designed for data collection. After selecting the top 100 most cited publications, major key attributes were extracted from the data. For this purpose, the data were exported into Microsoft Excel 2019 to extract the required data and calculate the frequencies and percentages of the included publications. The following information was extracted: study title, year of publication, journal, authors name, institution, country, publication types, publication language, widely used keywords, and number of citations. The journals’ impact factor (IF) and quartile ranking (Q1–4) were obtained from Incites Journal Citation Reports 2020, released in June 2021 by Clarivate Analytics. The data were downloaded in 2 formats: plain text and comma-separated values.

2.5. Data analysis

For data analysis, 3 different tools were used. OriginPro 2018 software was used to generate the relevant graphs. For citation analysis, the data were exported in to HistCiteTM software.[ Furthermore, the data were plotted for visualization networks using VOSviewer software version 1.6.17 for windows.[ In addition, RStudio (biblioshiny package) was used to generate the cloud map, countries’ collaboration, and trend analysis.

2.6. Ethics and consent

This study involved no animal and human subjects; therefore, no ethical approval was required.

3. Results

3.1. General characteristics

The top 100 most cited papers on BRCA1 and BRCA2 were authored by 932 authors from 24 countries and published in 27 journals. These papers were published between 1994 and 2017. The GCS of these papers was 79,713 (797.1 citations per paper), ranging from 441 to 4671 citations. However, the overall local citation score was 588. The top 100 most cited papers were published in English, of which 93 papers were published as research articles. The overall collaboration among the authors was 9.49. The main facts about the top 100 most cited papers are presented in Table 1.
Table 1

Main facts about the top 100 most cited papers.

DescriptionResults
Main information
 Time-span1994–2017
 Documents100
 Publishing language (English)100
 Journals27
 Institutions292
 Countries24
 Average years from publication20
 Average citations per documents797.1
 Average citations per year per documents41.23
 Global citations score79,713
 Local citations score588
 References2545
Document types
 Article93
 Review4
 Letter3
Document contents
 Keywords Plus411
 Author’s keywords23
Authors
 Authors932
 Author appearances1324
 Authors of single-authored documents2
 Authors of multi-authored documents930
Author collaboration
 Single-authored documents2
 Documents per author0.107
 Authors per document9.32
 Co-authors per documents13.2
 Collaboration index9.49
Main facts about the top 100 most cited papers.

3.2. Top 10 highly cited papers

The highly cited paper was “A strong candidate for the breast and ovarian cancer susceptibility gene BRCA1” published by Miki et al (1994) in Science and was cited 4671 times. The top 10 most cited papers along with their conclusion bottom lines can be seen in Table 2, while the top 100 cited papers can be found in supplementary data (Table S1, Supplemental Digital Content 1, http://links.lww.com/MD/H319). Of the top 100 most cited papers, 15 papers were cited more than 1000 times, 58 papers from 500 to 999 times, and 27 papers from 441 to 499 times.
Table 2

The top 10 most cited publications with basic information and bottom lines.

RankingStudy title [reference]GCSGCS per yearBottom lines
1A strong candidate for the breast and ovarian-cancer susceptibility gene BRCA1[30]4671194.63BRCA1 was identified as a potential candidate gene implicated in breast and ovarian cancer if mutated. Pathogenic insertions, deletion, substitutions, and regulatory mutations were identified in this study in different kindred for breast and ovarian cancer progression
2Specific killing of BRCA2-deficient tumors’ with inhibitors of poly (ADP-ribose) polymerase[31]2894222.62BRCA2 mutations damage the self-repair mechanism of DNA, which usually enables the DNA to make necessary repairs after certain breakdowns. PARP inhibitors play an important role in identifying a deficiency in homologous recombination due to deficient BRCA2 mutant cells
3Identification of the breast cancer susceptibility gene BRCA2[32]2501108.74BRCA2 was identified as a potential gene implicated in breast cancer
4Average risks of breast and ovarian cancer associated with BRCA1 or BRCA2 mutations detected in case series unselected for family history: a combined analysis of 22 studies[33]2304153.60A meta-analysis was performed to estimate breast or ovarian cancer risks associated with different BRCA1 and BRCA2 mutations
5Genetic heterogeneity and penetrance analysis of the BRCA1 and BRCA2 genes in breast cancer families[34]2144107.20The contribution of BRCA1 and BRCA2 for inherited cases of breast cancer was assessed in 237 families, each with at least 4 cases of breast cancer. The disease was associated with BRCA1 in 52% of families, BRCA2 in 32% of families, and neither of these in 16% of families. Penetrance estimates were also provided in the study, which can be used for better counselling of mutation carriers
6The risk of cancer associated with specific mutations ofBRCA1 and BRCA2 among Ashkenazi Jews[35]163577.86Cancer risk of 3 specific mutations of BRCA1 and BRCA2 was estimated among Ashkenazi Jews
7Breast and ovarian cancer risks due to inherited mutations in BRCA1 and BRCA2[36]147798.47Breast and ovarian cancer risks were estimated among Ashkenazi Jewish women carrying inherited mutations in BRCA1 and BRCA2
8Risks of cancer in BRCA1-mutation carriers[37]142959.54The study estimated the risk of breast and ovarian cancer from the occurrence of second cancer. There is a greater chance of getting ovarian cancer if an individual is suffering from breast cancer and vice versa
9Localization of a breast cancer susceptibility gene, BRCA2, to chromosome 13Q12-13[38]140258.42Genetic reason for breast cancer was identified in families with cancer unlinked to the BRCA1 locus. Implication of BRCA2, a new gene on chromosome 13q1 2-13, was identified. BRCA2 confers a high risk of breast cancer but does not confer a substantially higher risk for ovarian cancer
10Oral poly (ADP-ribose) polymerase inhibitor olaparib in patients with BRCA1 or BRCA2 mutations and advanced breast cancer: a proof-of-concept trial.[39]1261157.63A concept trial of ADP-ribose inhibitor, Olaparib was carried out in patients with BRCA1 and BRCA2 mutations detected. This inhibition showed a favorable therapeutic index for targeted treatment in breast cancer patients from Australia, Germany, Spain, Sweden, UK, and the USA

GCS = global citation score.

The top 10 most cited publications with basic information and bottom lines. GCS = global citation score.

3.3. Year of publications and citations score

The most productive years were 2002 (n = 11), and 2001 (n = 10), while the most cited years were 1994 (n = 9124), and 2002 (n = 8054). In total, 56% of the most cited papers were published between 1994 and 2002. The annual scientific publication growth rate was found to be −4.27%. As shown in Figure 2, the coefficient of determination (R2) of published papers was 0.4.
Figure 2.

Year of publication and global citation score.

Year of publication and global citation score.

3.4. Leading authors, journals, institutions, and countries

The most prolific authors were Easton DF (n = 16) and Peto J (n = 11), while the most cited authors were Easton DF (n = 16,176) and Narod S (n = 14,422) as shown in Table 3. Nature Genetics (n = 11), and Science (n = 10) were the top-ranked journals, while the most cited journals were Science (n = 12,095), and Nature (n = 8752). The New England Journal of Medicine had the highest IF (91.253) as shown in Table 4.
Table 3

Authors with at least 5 publications.

AuthorsPublicationsLCSLCS per yearGCSGCS per yearLocal cited references
Easton DF161215.916,1761632.4771
Peto J111155.3913,022669.5847
Devilee P8964.319672464.9829
Stratton MR8602.697361389.8933
Ford D71014.538870399.6524
Livingston DM7653.354481264.4255
Narod S71185.3714,422699.4321
Narod SA7442.365726353.6454
Ponder BAJ71125.118919404.9927
Weber BL7341.894426262.4239
Couch FJ6261.663487289.846
Goldgar D6964.269970456.325
Rebbeck TR6372.195692412.8738
Bishop DT5793.67025321.9822
Evans DG5110.935049462.0530
Garber JE5161.184349400.933
Haites N5532.474994249.3926
Jasin M5301.93281306.7437
Lenoir G5612.866221290.8424
Lynch H5863.818101362.319
Neuhausen S5914.118431378.5526
Seal S5482.15940307.2413
Weber B5683.155189243.4624

GCS = global citation score, LCS = local citation score.

Table 4

The top journals with at least 5 publications.

JournalsPublicationsCitationsCitations per yearIF 2020 (5-year)Quartile ranking (category rank)
Nature Genetics 116447344.5838.33 (36.431)Q1 (2/176)
Science 1012,095630.2947.728 (51.434)Q1 (2/72)
Molecular Cell 95587391.4617.97 (19.639)Q1 (6/295)
Cell 86185448.1141.584 (46.899)Q1 (2/295)
Journal of The National Cancer Institute 84797373.1713.506 (13.893)Q1 (16/242)
Nature 88752565.3749.962 (54.537)Q1 (1/72)
JAMA-Journal of The American Medical Association 74470896.7656.274 (60.151)Q1 (3/167)
American Journal of Human Genetics 56798375.7711.025 (12.095)Q1 (11/176)
Journal of Clinical Oncology 53838522.8544.544 (33.883)Q1 (4/242)
New England Journal of Medicine 54666257.2791.253 (89.676)Q1 (1/167)

IF = impact factor, Q = quartile.

Authors with at least 5 publications. GCS = global citation score, LCS = local citation score. The top journals with at least 5 publications. IF = impact factor, Q = quartile. The institution with maximum published papers was the University of Pennsylvania (n = 17), followed by Memorial Sloan Kettering Cancer Centre (n = 15), and the University of Cambridge (n = 15). However, the most cited institutions were the University of Cambridge (n = 16,069), the University of Utah (n = 15,252), and the University of Pennsylvania (n = 12,792), as shown in Table 5. As shown in Table 6, the USA was the most productive and cited country (n = 76, citations = 62,105), followed by the UK (n = 32, citations = 30,970), and Canada (n = 20, citations = 24,112).
Table 5

Institutions with at least 5 publications.

InstitutionsPublicationsLCSGCS
Univ Penn178712,792
Mem Sloan Kettering Canc Ctr158411,960
Univ Cambridge1512216,069
Dana Farber Canc Inst143810,194
Inst Canc Res129812,348
Univ Utah1215515,252
Int Agcy Res Canc1011310,956
Netherlands Canc Inst10296735
Harvard Univ9355231
NCI9607052
Creighton Univ8889705
Leiden Univ8969672
Yale Univ8677743
McGill Univ711612,655
St Marys Hosp7216767
Univ Texas7574071
Univ Toronto7505977
Univ Aberdeen6545477
Univ Melbourne6215830
Womens Coll Hosp6486352
Addenbrookes Hosp5554427
Fox Chase Canc Ctr5193901
Imperial Canc Res Fund5807070
Inst Curie5484486
Massachusetts Gen Hosp593080

GCS = global citation score, LCS = local citation score.

Table 6

Countries with at least in 5 publications.

CountriesPublicationsLCSGCS
USA7649362,105
UK3218930,970
Canada2019724,112
Netherlands169614,664
France12959265
Australia10259168
Germany8166050
Sweden75811,627
Spain684874
Iceland5746261
Ireland5303306

GCS = global citation score, LCS = local citation score.

Institutions with at least 5 publications. GCS = global citation score, LCS = local citation score. Countries with at least in 5 publications. GCS = global citation score, LCS = local citation score.

3.5. Keywords and trend topics analysis

The minimum number of occurrences of a keyword was fixed at 5, while the minimum cluster size was 10. Of the total KeyWords Plus (n = 411), only 45 met the threshold, and were plotted into 3 clusters, and each color represented a different cluster; red color (cluster 1, n = 17), green color (cluster 2, n = 15), and blue color (cluster 3, 13), as shown in Figure 3A. The most frequently appearing KeyWords Plus were ovarian-cancer (n = 31), breast-cancer (n = 20), mutations (n = 16), gene (n = 12), familial breast (n = 11), families (n = 10), germline mutations (n = 10), susceptibility gene (n = 10), women (n = 10), and protein (n = 9). However, the frequently used author’s keywords were BRCA1 (n = 3), DNA repair (n = 3), and cancer (n = 2), as shown in Figure 3B. In recent times, the trend topics based on title were patients, mutations, carriers, ovarian, and risk, as shown in Figure 3C. The factorial analysis map was generated based on multiple correspondence analysis method as shown in Figure 3D. The field was selected as KeyWords Plus. The data were plotted into 2 clusters; cluster 1 (red color) and cluster 2 (blue color). Cluster 1 is grouped by ovarian cancer, breast cancer, mutations, gene, familial breast, families, germline mutations, and other topics related to cancer, women, risk, protein, expressions, identification, in vivo, linkage, carcinoma, prevalence, recombination, and therapy. Cluster 2 is grouped by homology directed repair, tumors, and defect.
Figure 3.

(A) KeyWords Plus network visualization mapping, (B) WordCloud map of author’s keywords, (C) trend topics analysis, and (D) factorial analysis (conceptual structure map).

(A) KeyWords Plus network visualization mapping, (B) WordCloud map of author’s keywords, (C) trend topics analysis, and (D) factorial analysis (conceptual structure map).

3.6. Corresponding author’s country and collaboration world map

The USA had the highest multiple country and single country corresponding author publications, 17 and 36, respectively, as shown in Figure 4A. As shown in Figure 4B, the USA had the strongest collaboration with the UK (n = 16), followed by the UK and the Netherlands (n = 15), the USA and Netherlands (n = 12), the UK and France (n = 11), and the USA and Canada (n = 11).
Figure 4.

(A) Corresponding author’s country, (B) collaboration world map.

(A) Corresponding author’s country, (B) collaboration world map.

4. Discussion

This study is the first comprehensive bibliometric analysis of the top 100 most cited papers on BRCA1 and BRCA2 associated breast and ovarian cancer globally. Each year, 1.3 million breast cancer cases are diagnosed globally, which is the most common invasive cancer in females.[ BRCA1 and BRCA2 are among the most common genes implicated in the progression of breast and ovarian cancer. Therefore, it is important for the scientific community to identify and study the most influential papers in the field. This analysis can help fulfill the missing gaps, provide the recent and potential trends in this area, and direct attention to the critical aspects that have not been addressed yet. The outcomes of this study include the most prolific authors, most published journals, most active institutions, highly contributing countries, keywords and trend topics analysis, and citations count. In our analysis, the most published journal was Nature Genetics which published 11 articles, while Science published 10, and New England Journal of Medicine published only 5 articles among the top 100 cited articles. The IF of Nature Genetics is the lowest compared to the other 2 journals. This phenomenon indicates that the relevancy of a journal to the nature of study plays a vital role than the IF of a journal. In this study, the overall GCS was 79,713 (ranging from 441 to 4671 citations), while the local citation score was 588 (ranging from 1 to 43 citations). In the top 100 most cited papers, 5 papers were cited more than 2000 times (2144–4671 citations), 10 papers were cited more than 1000 times (1014–1635 citations), 58 papers were cited at least 500 times (500–986 citations), while the remaining papers (n = 27) were cited more than 400 times (441–494 citations). Generally, papers published in relevant and reputed journals with important public health issues attract more readers and can be cited multiple times. In the current study, no smooth ascending or descending trend in the year-wise citations was observed. This variation may be due to the current trends in the field, as the BRCA study tends more to the diagnosis while treatment is a crucial step after the diagnosis. Scientists may have focused on other aspects of the disease. The included studies were mainly based on experimental work, that is, research articles (93%). This indicates that the research emphasis has been directed toward diagnosis, treatment, and applications rather than literature-based work. All the 100 top-cited papers were published in English, which is the leading scientific language used globally for research dissemination. The University of Pennsylvania was the top leading institution in terms of publications, while the most cited institution was the University of Cambridge. In this category, universities remained on top while hospitals and centers remained on the bottom. This trend highlights the understandable fact of different objectives of universities and hospitals. Among the countries involved in the top 100 cited papers, the USA was the leading country in terms of publications, citations, and collaboration. This trend is in line with many other studies in various research fields.[ None of the resource-limited countries were involved in the highly influential studies as the main contributor or leader. This trend has various reasons, for which funding allocation by any country is the most important. In the USA, research and development is funded by a number of sectors, including the federal government, academia, businesses, nonprofit organizations, and state governments for a variety of purposes. As a result, in the 20th century, the USA has become a global leader in research and development.[ During the period between 2003 and 2007, studies were conducted on the topics related to patients, mutations, carriers, ovarian, and risk factors. However, an examination of the top 10 most cited studies indicates that 90% of the studies focused on diagnosis, while 10% focused on treatment. It is observed that after performing certain work on diagnosis, the scientist moved to treatment as the main aim of diagnosis is to use this information for treatment. This trend has shown a ray of hope that scientists have assessed this problem and are seriously working to solve it step by step.[ Another study found that GD2 could be used as a monitoring target in clinical isolates from breast cancer patients.[ This study will not only be important for medical practitioners but also for policymakers for better decisions. More research needs to be carried out in this field, and researchers, especially from disease burdened countries, should be encouraged to carry out research and share their findings in peer-reviewed journals.

5. Conclusion

This bibliometric study should boldly call out that the vast majority of the most influential papers originate from the USA, the UK, and Canada, clustering around well-known institutions. Interestingly, these contributions are well respected and deeply appreciated. However, it would benefit the community at large to have industry and individual government funding directed more towards high-quality research and peer-reviewed research publications in low-income countries. The most frequently appearing keywords were ovarian-cancer, breast-cancer, mutations, gene, and familial breast. In recent times, the trend topics were patients, mutations, carriers, ovarian, and risk. A better understanding of breast and ovarian cancer’s clinical features along with screening of BRCA1 and BRCA2 in the community may lead to timely diagnosis and management. This can partially lead to a better quality of life for the patients and can help to reduce the occurrence of hereditary breast cancer in future generations.

6. Limitations

This study has some limitations. Firstly, only the WoSCC database was utilized. Secondly, the search was limited to the title field. Thirdly, the self-cations of the authors were not excluded. Therefore, the above limitations may bias the frequency of publications frequency and citation score.

Author contributions

Conceptualization: Shadi Alkhayyat, Muhammad Khan, Tauseef Ahmad. Data curation: Muhammad Khan, Tauseef Ahmad. Formal analysis: Tauseef Ahmad. Methodology: Shadi Alkhayyat, Muhammad Khan, Tauseef Ahmad. Project administration: Tauseef Ahmad. Software: Tauseef Ahmad. Validation: Muhammad Khan, Tauseef Ahmad, Haroon, Mukhtiar Baig. Visualization: Tauseef Ahmad. Writing – original draft: Shadi Alkhayyat, Muhammad Khan, Tauseef Ahmad, Haroon, Huma Tariq. Writing – review & editing: Muhammad Khan, Tauseef Ahmad, Huma Tariq, Mukhtiar Baig.

Paper context

Breast cancer is the most frequently diagnosed and reported cause of death in women. To characterize important attributes of the top 100 most cited papers in breast and ovarian cancer-related BRCA1 and BRCA2 genes. Overall, the papers included in the current study were cited 79,713 times (ranging from 441 to 4671). The most published journal was Nature Genetics. The most productive country was the USA. However, collaborations with developed countries are needed to promote breast cancer research in developing countries.
  45 in total

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Authors:  Andrew Tutt; Mark Robson; Judy E Garber; Susan M Domchek; M William Audeh; Jeffrey N Weitzel; Michael Friedlander; Banu Arun; Niklas Loman; Rita K Schmutzler; Andrew Wardley; Gillian Mitchell; Helena Earl; Mark Wickens; James Carmichael
Journal:  Lancet       Date:  2010-07-06       Impact factor: 79.321

4.  Breast-feeding and the risk of breast cancer in BRCA1 and BRCA2 mutation carriers.

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Journal:  Hum Vaccin Immunother       Date:  2021-05-04       Impact factor: 3.452

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