Literature DB >> 36187270

Encoder-decoder deep learning network for simultaneous reconstruction of fluorescence yield and lifetime distributions.

Jiaju Cheng1, Peng Zhang2,3, Fei Liu4, Jie Liu2, Hui Hui3, Jie Tian3,5, Jianwen Luo1.   

Abstract

A time-domain fluorescence molecular tomography in reflective geometry (TD-rFMT) has been proposed to circumvent the penetration limit and reconstruct fluorescence distribution within a 2.5-cm depth regardless of the object size. In this paper, an end-to-end encoder-decoder network is proposed to further enhance the reconstruction performance of TD-rFMT. The network reconstructs both the fluorescence yield and lifetime distributions directly from the time-resolved fluorescent signals. According to the properties of TD-rFMT, proper noise was added to the simulation training data and a customized loss function was adopted for self-supervised and supervised joint training. Simulations and phantom experiments demonstrate that the proposed network can significantly improve the spatial resolution, positioning accuracy, and accuracy of lifetime values.
© 2022 Optica Publishing Group under the terms of the Optica Open Access Publishing Agreement.

Entities:  

Year:  2022        PMID: 36187270      PMCID: PMC9484427          DOI: 10.1364/BOE.466349

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.562


  15 in total

1.  Early-photon fluorescence tomography of a heterogeneous mouse model with the telegraph equation.

Authors:  Bin Zhang; Xu Cao; Fei Liu; Xin Liu; Xin Wang; Jing Bai
Journal:  Appl Opt       Date:  2011-10-01       Impact factor: 1.980

Review 2.  Fluorescence lifetime measurements and biological imaging.

Authors:  Mikhail Y Berezin; Samuel Achilefu
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

3.  3D deep encoder-decoder network for fluorescence molecular tomography.

Authors:  Lin Guo; Fei Liu; Chuangjian Cai; Jie Liu; Guanglei Zhang
Journal:  Opt Lett       Date:  2019-04-15       Impact factor: 3.776

4.  UHR-DeepFMT: Ultra-High Spatial Resolution Reconstruction of Fluorescence Molecular Tomography Based on 3D Fusion Dual-Sampling Deep Neural Network.

Authors:  Peng Zhang; Guangda Fan; Tongtong Xing; Fan Song; Guanglei Zhang
Journal:  IEEE Trans Med Imaging       Date:  2021-04-07       Impact factor: 10.048

5.  End-to-end deep neural network for optical inversion in quantitative photoacoustic imaging.

Authors:  Chuangjian Cai; Kexin Deng; Cheng Ma; Jianwen Luo
Journal:  Opt Lett       Date:  2018-06-15       Impact factor: 3.776

6.  Reconstruction of high-resolution early-photon tomography based on the first derivative of temporal point spread function.

Authors:  Jiaju Cheng; Chuangjian Cai; Jianwen Luo
Journal:  J Biomed Opt       Date:  2018-06       Impact factor: 3.170

7.  3D k-space reflectance fluorescence tomography via deep learning.

Authors:  Navid Ibtehaj Nizam; Marien Ochoa; Jason T Smith; Xavier Intes
Journal:  Opt Lett       Date:  2022-03-15       Impact factor: 3.560

8.  Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate.

Authors:  Vasilis Ntziachristos; Eyk A Schellenberger; Jorge Ripoll; Doreen Yessayan; Edward Graves; Alexei Bogdanov; Lee Josephson; Ralph Weissleder
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-10       Impact factor: 11.205

9.  In vivo long-term investigation of tumor bearing mKate2 by an in-house fluorescence molecular imaging system.

Authors:  Kedi Zhou; Yichen Ding; Ivan Vuletic; Yonglu Tian; Jun Li; Jinghao Liu; Yixing Huang; Hongfang Sun; Changhui Li; Qiushi Ren; Yanye Lu
Journal:  Biomed Eng Online       Date:  2018-12-29       Impact factor: 2.819

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