Literature DB >> 36187235

MF-AV-Net: an open-source deep learning network with multimodal fusion options for artery-vein segmentation in OCT angiography.

Mansour Abtahi1,2, David Le1,2, Jennifer I Lim3, Xincheng Yao1,3.   

Abstract

This study is to demonstrate the effect of multimodal fusion on the performance of deep learning artery-vein (AV) segmentation in optical coherence tomography (OCT) and OCT angiography (OCTA); and to explore OCT/OCTA characteristics used in the deep learning AV segmentation. We quantitatively evaluated multimodal architectures with early and late OCT-OCTA fusions, compared to the unimodal architectures with OCT-only and OCTA-only inputs. The OCTA-only architecture, early OCT-OCTA fusion architecture, and late OCT-OCTA fusion architecture yielded competitive performances. For the 6 mm×6 mm and 3 mm×3 mm datasets, the late fusion architecture achieved an overall accuracy of 96.02% and 94.00%, slightly better than the OCTA-only architecture which achieved an overall accuracy of 95.76% and 93.79%. 6 mm×6 mm OCTA images show AV information at pre-capillary level structure, while 3 mm×3 mm OCTA images reveal AV information at capillary level detail. In order to interpret the deep learning performance, saliency maps were produced to identify OCT/OCTA image characteristics for AV segmentation. Comparative OCT and OCTA saliency maps support the capillary-free zone as one of the possible features for AV segmentation in OCTA. The deep learning network MF-AV-Net used in this study is available on GitHub for open access.
© 2022 Optica Publishing Group under the terms of the Optica Open Access Publishing Agreement.

Entities:  

Year:  2022        PMID: 36187235      PMCID: PMC9484445          DOI: 10.1364/BOE.468483

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.562


  24 in total

1.  Differentiating Veins From Arteries on Optical Coherence Tomography Angiography by Identifying Deep Capillary Plexus Vortices.

Authors:  Xiaoyu Xu; Nicolas A Yannuzzi; Pedro Fernández-Avellaneda; Jose J Echegaray; Kimberly D Tran; Jonathan F Russell; Nimesh A Patel; Rehan M Hussain; David Sarraf; K Bailey Freund
Journal:  Am J Ophthalmol       Date:  2019-06-19       Impact factor: 5.258

2.  An automatic graph-based approach for artery/vein classification in retinal images.

Authors:  Behdad Dashtbozorg; Ana Maria Mendonça; Aurélio Campilho
Journal:  IEEE Trans Image Process       Date:  2013-05-17       Impact factor: 10.856

3.  OCT feature analysis guided artery-vein differentiation in OCTA.

Authors:  Minhaj Alam; Devrim Toslak; Jennifer I Lim; Xincheng Yao
Journal:  Biomed Opt Express       Date:  2019-03-26       Impact factor: 3.732

4.  Near infrared oximetry-guided artery-vein classification in optical coherence tomography angiography.

Authors:  Taeyoon Son; Minhaj Alam; Tae-Hoon Kim; Changgeng Liu; Devrim Toslak; Xincheng Yao
Journal:  Exp Biol Med (Maywood)       Date:  2019-05-14

5.  Loss odyssey in medical image segmentation.

Authors:  Jun Ma; Jianan Chen; Matthew Ng; Rui Huang; Yu Li; Chen Li; Xiaoping Yang; Anne L Martel
Journal:  Med Image Anal       Date:  2021-03-19       Impact factor: 8.545

6.  Automated arteriole and venule classification using deep learning for retinal images from the UK Biobank cohort.

Authors:  R A Welikala; P J Foster; P H Whincup; A R Rudnicka; C G Owen; D P Strachan; S A Barman
Journal:  Comput Biol Med       Date:  2017-09-08       Impact factor: 4.589

7.  Depth-resolved vascular profile features for artery-vein classification in OCT and OCT angiography of human retina.

Authors:  Tobiloba Adejumo; Tae-Hoon Kim; David Le; Taeyoon Son; Guangying Ma; Xincheng Yao
Journal:  Biomed Opt Express       Date:  2022-02-01       Impact factor: 3.732

Review 8.  Quantitative optical coherence tomography angiography: A review.

Authors:  Xincheng Yao; Minhaj N Alam; David Le; Devrim Toslak
Journal:  Exp Biol Med (Maywood)       Date:  2020-01-20

9.  Distances From Capillaries to Arterioles or Venules Measured Using OCTA and AOSLO.

Authors:  Edmund Arthur; Ann E Elsner; Kaitlyn A Sapoznik; Joel A Papay; Matthew S Muller; Stephen A Burns
Journal:  Invest Ophthalmol Vis Sci       Date:  2019-05-01       Impact factor: 4.799

10.  Transfer Learning for Automated OCTA Detection of Diabetic Retinopathy.

Authors:  David Le; Minhaj Alam; Cham K Yao; Jennifer I Lim; Yi-Ting Hsieh; Robison V P Chan; Devrim Toslak; Xincheng Yao
Journal:  Transl Vis Sci Technol       Date:  2020-07-02       Impact factor: 3.283

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