Literature DB >> 36181608

Comprehensive Analyses of Prognostic Values and Immune Infiltration of KDM3 Gene Family in Hepatocellular Carcinoma.

Gang-Hua Lin1, Shu-Hsien Wu1,2, Yu-Chun Ko1, Chien-Hua Lin1,3, Guo-Shiou Liao1, Teng-Wei Chen1, Yen-Ju Chen4, Kuo-Feng Hsu5.   

Abstract

Hepatocellular carcinoma (HCC) is one of the most commonly diagnosed malignancy globally with a pessimistic prognosis. Previous studies have demonstrated that abnormal expression of genes in the lysine-specific histone demethylase 3 (KDM3) family with epigenetic changes and dysregulation of enzymes promotes cancer progression. In this study, multiomics analyses were utilized to analyze differential expression, prognostic value, genetic alteration, protein-protein interaction, associated biological pathways and immune cell infiltration of KDM3s in patients with HCC. KDM3A-C were significantly upregulated to different extents based on pathologic and tumor grades in patients with HCC compared to normal tissue. Of note, higher KDM3A expression was associated with poor survival in HCC patients, whereas KDM3B and KDM3C were not associated with survival. Furthermore, KDM3A-B genetic alterations had significant effects on survival in patients with HCC. Analyses of the KEGG pathway and miRNAs targets of KDM3A and KDM3B in HCC may provide potential value in tumor behaviors and treatment. The differential expression of the KDM3 family has a strongly significant correlation with the infiltration of the abundance of immune cells, including B cells, CD8+ T cells, CD4+ T cells, macrophages, neutrophils, and dendritic cells in HCC. This study indicates that KDM3A may have the potential to be a promising molecular target in terms of prognostic biomarkers or therapeutic targets for HCC treatment.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Bioinformatics; Hepatocellular carcinoma; Immune infiltration; KDM3; Survival

Year:  2022        PMID: 36181608     DOI: 10.1007/s12033-022-00568-z

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.860


  4 in total

1.  Downregulation of histone demethylase JMJD1C inhibits colorectal cancer metastasis through targeting ATF2.

Authors:  Cheng Chen; Maimaiti Aihemaiti; Xin Zhang; Hui Qu; Qi-Long Sun; Qing-Si He; Wen-Bin Yu
Journal:  Am J Cancer Res       Date:  2018-05-01       Impact factor: 6.166

2.  Histone demethylase JMJD1C regulates esophageal cancer proliferation Via YAP1 signaling.

Authors:  Yixin Cai; Xiangning Fu; Yu Deng
Journal:  Am J Cancer Res       Date:  2017-01-01       Impact factor: 6.166

Review 3.  The Role of Exosomes in the Crosstalk between Adipocytes and Liver Cancer Cells.

Authors:  Leslimar Rios-Colon; Elena Arthur; Suryakant Niture; Qi Qi; John T Moore; Deepak Kumar
Journal:  Cells       Date:  2020-08-29       Impact factor: 6.600

  4 in total

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