Literature DB >> 36178919

Analysis of predicted factors for bronchoalveolar lavage recovery failure: An observational study.

Masafumi Shimoda1, Yoshiaki Tanaka1, Kozo Morimoto1, Taro Abe1, Reina Asaga1, Kei Nakajima1, Ken Okamura1, Kozo Yoshimori1, Ken Ohta1.   

Abstract

BACKGROUND: The bronchoalveolar lavage (BAL) recovery rate should generally be more than 30% for effective diagnosis. However, there have been no reports investigating a target bronchus for BAL, and the cause of BAL recovery failure is uncertain. Therefore, this study detected predictive factors for BAL recovery failure through investigations on a target bronchus for BAL by using a 3D image analysis system. Therefore, this study detected predictive factors for BAL recovery failure.
MATERIALS AND METHODS: We retrospectively collected data from 338 adult patients who underwent BAL procedures at Fukujuji Hospital from June 2018-March 2022. Factors correlated with the BAL recovery rate were detected. Furthermore, the patients were divided into the failure group (recovery rate <30%; 36 patients) and the success group (recovery rate ≥30%; 302 patients), and data were compared between the two groups by analysing the target bronchus by using a 3D image analysis system.
RESULTS: The patients in the failure group were older (median 74.5 years old [IQR 68.0-79.0] vs. median 70.0 years old [IQR 59.0-76.0], p = 0.016), more likely to be male (n = 27 [75.0%] vs. n = 172 [57.0%], p = 0.048), more likely to have COPD (n = 7 [19.4%] vs. n = 14 [4.6%], p = 0.003), and more likely to perform a target site of BAL other than the middle/lingual lobe (n = 11 [30.5%] vs. n = 35 [11.6%], p = 0.004) than those in the success group. The area of the bronchial wall was positively related to the recovery rate (r = 0.141, p = 0.009), and the area of the bronchial wall in the failure group was lower than that in the success group (median 10.5 mm2 [interquartile range (IQR) 8.1-14.6] vs. median 14.5 mm2 [11.4-19.0], p<0.001).
CONCLUSION: The study shows that a thin bronchial wall, COPD, and a target site of BAL other than the middle/lingual lobe were identified as the predicted factors for BAL recovery failure. The weakness of the bronchial wall might cause bronchial collapse during the BAL procedure.

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Mesh:

Year:  2022        PMID: 36178919      PMCID: PMC9524652          DOI: 10.1371/journal.pone.0275377

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.752


Background

Bronchoalveolar lavage (BAL) is an established diagnostic tool for interstitial lung and infectious bronchopulmonary diseases [1]. Generally, the low BAL recovery rate is a poor study, and the BAL recovery rate should be more than 30% for an effective diagnosis [1, 2] because a total volume of retrieved fluid less than 30% may provide a misleading cell differential [3]. The predicted factors for a low BAL recovery rate were reported, such as male sex, elderly age, smoking history, chronic obstructive pulmonary disease (COPD), performing BAL at bronchi other than the middle lobe or lingula, and low forced expiratory volume in 1 second (FEV1) divided by forced vital capacity (FEV1/FVC) [1, 2, 4, 5]. However, few reports have compared recovery rates of <30% and recovery rates of ≥30% [5]; there have been no reports investigating a target bronchus for BAL. The common cause of BAL recovery failure might be the collapse of the bronchus [4], and we hypothesised that weakness of the bronchial wall might be related to BAL recovery failure. A 3D image analysis system can evaluate a target bronchus for BAL to calculate the area of the bronchial wall [6, 7]; Therefore, this study demonstrated that predicted factors for a BAL recovery rate of less than 30% could be detected by using a 3D image analysis system to investigate a target bronchus for BAL.

Materials and methods

Study design and setting

We retrospectively collected the data of 372 adult patients (age ≥18 years old) who underwent BAL procedures at Fukujuji Hospital from June 2018 to March 2022. The flowchart of the study is shown in Fig 1. A total of 338 patients with an available thin-slice thoracic CT scan were reviewed, excluding 31 patients whose data could not be analysed using a 3D image analysis system because they did not undergo thin-slice computed tomography (CT) scans and 1 patient with an unknown target site for BAL. Two patients were excluded because their BAL procedures could not be finished because of sputum obstruction to an instrumentation channel of the bronchoscope or because of wedges coming off.
Fig 1

Flowchart of the study.

BAL bronchoalveolar lavage fluid.

Flowchart of the study.

BAL bronchoalveolar lavage fluid. Furthermore, the patients were divided into two groups based on the BAL total recovery rate, and the data were compared between the two groups. Data regarding symptoms, laboratory test results, radiological findings, and other relevant findings were collected. The study was approved by the Institutional Review Board of Fukujuji Hospital, the requirement for patient consent was waived because the study did not include any identifiable information for patients, and we applied the opt-out method. The decisions made by this board were based on and in accordance with the Declaration of Helsinki (Study number: 22001).

Definition

The recovery rate was calculated as the ratio of the amount of recovery fluid after instillation to the amount of extracted fluid. The BAL failure group was identified as having a total recovery rate of less than 30%, which is considered a deterioration for an effective diagnosis in patients with interstitial lung disease [1, 2]. The area of the bronchial wall, the area of the bronchial lumen, and the lung volume affiliated bronchus, which is a target site for BAL, were calculated from CT images using a SYNAPSE VINCENT volume analyser (FUJIFILM Medical Co., Ltd., Tokyo, Japan), which is a 3D image analysis system; the system is very useful for evaluating respiratory function, surgical simulation function, virtual bronchoscopic navigation, and other parameters [8-10]. The outer and inner diameters of the bronchus were measured by lung analysis and were analysed at 5 points near the target bronchus orifice. The average of those 5 data points was used (Fig 2A). The area of the bronchial lumen was calculated as the area of the oval (area of the bronchial lumen = [major axis length of inner diameter]×[minor axis length of inner diameter]×3.14÷4). The area of the bronchial wall was calculated using the following formula: the area of the bronchial wall = (major axis length of outer diameter)×(minor axis length of outer diameter)×3.14÷4-(the area of the bronchial lumen). The lung volume was calculated by lung resection analysis (Fig 2B), which can analyse the lung volume dominated by a designated bronchus.
Fig 2

A 3D image analysis system using a SYNAPSE VINCENT volume analyser calculated the area of the bronchial wall and bronchial lumen based on the lung analysis (A), lung volume affiliated bronchus in which BAL was performed based on the lung resection analysis (B), and bifurcation numbers of bronchus based on bronchoscopy simulator (C).

A target site of the lung segment for performing BAL was divided into (1) the middle and lingual lobes, which are the usual lung segments for performing BAL, and (2) other segments, including the right upper and lower lobes, left segmentum apicoposterius and anterius, and left lower lobes. The bifurcation numbers of a distal bronchus from a target site for BAL were detected using the bronchoscopy simulator (Fig 2C). The bronchoscopy simulator can demonstrate the bronchial pathway to the peripheral lesion and observe the bifurcation of the bronchus on the target bronchus.

BAL procedure

Bronchoscopy was performed under pharyngeal anaesthesia with 2% xylocaine solution and an intravenous premedication consisting of 1–5 mg midazolam as the sedative and/or 17.5–35 mg pethidine as the analgesic in a routine manner. The premedication doses were made as deemed appropriate by the handling physician. The bronchoscope was inserted transorally, and 2% xylocaine solution was sprinkled through the instrumentation channel of the bronchoscope. Oxygen humidified via the nasal tube was given during the examination, and the oxygen saturation was controlled with pulsoxymetry. To conduct BAL, the tip of the bronchoscope was placed into the wedge position in a lobe/segment/subsegmental bronchus. BAL was performed with three aliquots of 50 ml physiological saline at room temperature; using a method common in Japan, the saline was gradually instilled and then gently suctioned back through an instrumentation channel [2]. The recovery rate of BAL from the 50-, 100-, and 150-mL injections were labelled the recovery rates of the 1st, 2nd, and 3rd aliquots, respectively.

Statistical methods

All data were analysed and processed using EZR, version 1.53 [11]. The Mann–Whitney U test, Pearson’s chi-squared test, and binomial logistic regression analysis were used for group comparisons. The Kruskal–Wallis test was used to compare data among 3 groups or more, and Bonferroni’s correction was used for comparative testing. The correlated factors of the BAL recovery rate were detected based on Spearman’s correlation analysis. The odds ratios were calculated. A receiver operating characteristic (ROC) curve was constructed and used to determine the cut-off values. The level of statistical significance was set at p = 0.05 (2-tailed).

Results

In the baseline characteristics of the study, the median age was 70.5 years (interquartile range (IQR): 60.0–77.0), and there were 200 males (59.2%). The median BAL recovery rate was 51.0% (IQR: 39.3–60.0), including 15.0% (IQR: 10.0–19.0) of the 1st aliquot, 24.0% (IQR: 18.0–30.0) of the 2nd aliquot, and 37.0% (IQR: 29.0–43.0) of the 3rd aliquot. There were 36 patients (10.7%) in the failure group and 302 patients (89.3%) in the success group. The comparisons between the failure group and the success group are shown in Table 1. Male sex, COPD, a target site of BAL other than the middle/lingular segment, the area of the bronchial wall, and median were associated with a low rate of BAL.
Table 1

Comparisons between the failure group and the success group.

The failure group (n = 36)The success group (n = 302) p value
Age, median (IQR), years74.5 (68.0–79.0)70.0 (59.0–76.0)0.016
Sex (Male/Female)27/9172/1300.048
Having Comorbidity31 (86.1)266 (88.1)0.943
 COPD, n (%)7 (19.4)14 (4.6)0.003
 Bronchial asthma, n (%)7 (19.4)27 (8.9)0.071
The number of cigarettes smoked, n (pack-year) a15.5 (0–30.9)8.9 (0–33.0)0.383
Laboratory findings; WBCs, median (IQR), cells/μL7,785 (6,695–8,525)7,485 (6,000–9,133)0.556
A target site of BAL other than the middle/lingual lobe, n (%)11 (30.5)35 (11.6)0.004
The area of the bronchial lumen, median (IQR), mm28.0 (5.9–12.5)9.4 (7.1–12.6)0.418
The area of the bronchial wall, median (IQR), mm210.5 (8.1–14.6)14.5 (11.4–19.0)<0.001

IQR interquartile range, COPD chronic obstructive pulmonary disease, BAL bronchoalveolar lavage fluid

a: n = 326

IQR interquartile range, COPD chronic obstructive pulmonary disease, BAL bronchoalveolar lavage fluid a: n = 326 The correlations with the recovery rate of BAL were calculated (S1 Table). Age (r = -0.131, p = 0.016), the number of cigarettes smoked (pack-year) (r = -0.212, p<0.001), and white blood cell count (r = -0.132, p = 0.015) were negatively related to the recovery rate. The area of the bronchial wall was positively related to the recovery rate (r = 0.141, p = 0.009). In contrast, the area of the bronchial lumen (r = 0.023, p = 0.672) and lung volume affiliated with a target bronchus for BAL (r = 0.003, p = 0.952) did not show a significant relationship. Table 2 shows comparisons of the BAL recovery rate for affecting factors. The recovery rate was lower in patients who were males, had comorbidities, had COPD, and had bronchial asthma. Past smokers showed a lower recovery rate than never smokers, while current smokers did not show a significant difference from never smokers or past smokers. Regarding a target site for performing BAL, there was no significant difference in the recovery rate in the left-right lung and lobe/segment/subsegment bronchus. The median recovery rate in the middle/lingual lobe was higher than that in the other lobes. The other lobes were the upper lobe/superior segment in 27 patients and the lower lobe in 19 patents.
Table 2

Factors affecting the recovery rate of BAL.

VariablesNumber of patients, n (%)Recovery rate, % (IQR) p value
SexMale200 (59.2)48.0 (37.5–58.0)<0.001
Female138 (40.8)55.0 (46.3–61.0)
Having comorbidityYes302 (89.3)51.0 (39.0–60.0)0.005
No36 (10.7)57.5 (50.8–63.3)
COPDYes22 (6.5)38.0 (26.0–45.0)<0.001
No317 (93.5)52.0 (41.0–61.0)
Bronchial asthmaYes35 (10.3)48.0 (34.3–55.0)0.034
No304 (89.7)51.0 (41.0–61.0)
Smoking historyNever127 (37.5)55.0 (45.0–62.0)0.002*
Past174 (51.3)48.5 (37.0–87.0)
Current37 (10.9)52.0 (41.0–57.0)
Having symptomYes297 (87.9)51.0 (39.0–60.0)0.854
No41 (12.1)51.0 (44.0–60.0)
A target site for performing BAL
Left-rightRight248 (73.2)51.0 (39.3–61.8)0.602
Left91 (26.8)51.0 (40.0–59.5)
SegmentMiddle/lingual lobe293 (86.4)51.0 (42.0–61.0)0.008
Other46 (13.6)47.0 (30.3–55.0)
Bronchuslobe14 (4.1)49.0 (41.0–56.0)0.148
Segment173 (51.0)55.0 (42.0–61.0)
Subsegment152 (44.8)49.0 (39.0–59.0)
Bifurcation numbers of bronchusTwo274 (81.7)51.0 (39.0–60.3)0.815
Three or more62 (18.3)51.0 (41.3–59.0)
Handling physicianResident91 (26.8)49.0 (38.3–57.8)0.174
Senior doctor248 (73.2)52.0 (41.0–61.0)

IQR interquartile range, COPD chronic obstructive pulmonary disease

*: Patients with a past smoking history had a lower recovery rate of BAL than never smoker patients, which was significant after Bonferroni’s correction.

IQR interquartile range, COPD chronic obstructive pulmonary disease *: Patients with a past smoking history had a lower recovery rate of BAL than never smoker patients, which was significant after Bonferroni’s correction. Three factors for BAL recovery rate failure, including a target site of BAL other than the middle/lingual lobe, COPD, and an area of bronchial wall <10.6 mm2, were analysed using binomial logistic regression analysis (Table 3). The cut-off value of the area of the bronchial wall for predicting BAL recovery rate failure was identified by using an ROC (Fig 3). The three factors were selected based on high odds ratios using Pearson’s chi-squared test (S2 Table). Three factors were associated with a high risk of BAL recovery rate failure and with high odds ratios.
Table 3

Binomial logistic regression analysis of the predictive factors for the BAL recovery rate failure.

Odds ratio95% Confidence interval p value
Upper limitLower limit
A target site of BAL other than the middle/lingual lobe4.111.729.800.001
COPD6.212.0918.50.001
The area of the bronchial wall <10.6 mm25.222.4311.2<0.001

BAL bronchoalveolar lavage fluid, COPD chronic obstructive pulmonary disease

Fig 3

ROC of the area of the bronchial wall for predicting BAL recovery rate failure.

The AUC was 0.673 (95% CI 0.572 to 0.775). The cut off value, which was decided by a point of maximum sensitivity and specificity, was 10.6 mm2. ROC: receiver operating characteristic curve, AUC: area under the curve, Cl: confidence interval.

ROC of the area of the bronchial wall for predicting BAL recovery rate failure.

The AUC was 0.673 (95% CI 0.572 to 0.775). The cut off value, which was decided by a point of maximum sensitivity and specificity, was 10.6 mm2. ROC: receiver operating characteristic curve, AUC: area under the curve, Cl: confidence interval. BAL bronchoalveolar lavage fluid, COPD chronic obstructive pulmonary disease In addition, the area of the bronchial wall did not show significant relationships with COPD (having COPD 13.8 mm2 [11.2–15.3] vs. no COPD 14.2 mm2 [10.9–15.3], p = 0.456), a target site of BAL (middle/lingual lobe 14.1 mm2 [10.9–18.5] vs. other lobes 14.3 mm2 [11.6–22.7], p = 0.241), sex (male 13.8 mm2 [10.4–17.6] vs. female 14.8 mm2 [11.3–19.2], p = 0.169), or age (>71 years old median 14.1 mm2 [10.6–19.1] vs. ≤71 years old median 14.2 mm2 [11.2–18.6], p = 0.877) (S1 Fig).

Discussion

This study shows that the thickness of the bronchial wall on a target bronchus for BAL by using a 3D image analysis system was detected as the predicted factor for BAL recovery rate failure, in addition to having COPD and a target site of BAL on other than the middle/lingual lobe. Previous studies report that COPD, a target site of BAL other than the middle/lingual lobe, male sex, and age are related to the BAL recovery rate [1, 2, 4, 5], similar to our data. In addition, only one study has reported on predicted factors for less than a 30% BAL recovery rate [5]. However, previous reports did not investigate a target bronchus for BAL, and no study has reported that a thin bronchial wall is related to the BAL recovery rate. The common cause of BAL recovery rate failure is the collapse of the bronchus [4]. In the BAL procedure, fluid is suctioned back with a negative pressure connected to the working channel of the bronchoscope. The risk of bronchial collapse can increase due to loss of elastic recoil and increasing compliance with the bronchus [2, 4], which might be related to weakness of the bronchial wall [2, 4]. Therefore, the fact that a thin bronchial wall was related to a low BAL recovery rate is very important, and it is hypothesised that weakness of the bronchial wall might be related to BAL recovery failure. Weakness of the bronchial wall is also seen in older individuals [12]. Both atrophy of the bronchial glands and mucosa and reduced compliance in the lung parenchyma are caused by ageing [2, 5, 13]. Therefore, elderly individuals may easily induce a collapse of the airway during BAL [5, 13]. According to previous reports, bronchial wall thickness is related to the severity of COPD [6, 7]. However, the bronchial wall in patients with COPD is thicker than that in normal subjects [14], and the high severity of COPD is associated with a thicker bronchial wall [6, 7]. This might seem to differ from our data, such that a lower area of the bronchial wall was related to BAL recovery failure. In our study, a thin bronchial wall, COPD, and a target site of BAL other than the middle/lingual lobe were independent predicted factors for BAL recovery failure based on binomial logistic regression analysis. There was no significant difference between the bronchial wall thickness and COPD. Therefore, there can be several causes for BAL recovery failure. In patients with COPD, the recovered fluid is reduced to 10–40% of that of instilled patients [15], and emphysema might be related to a cause of low BAL recovery failure [4, 16]. However, an increasing lung volume due to emphysema might not be related to a low BAL recovery; indeed, our data showed no relationship between the BAL recovery rate and lung volume affiliated with the bronchus, which is a target site for BAL. A previous report suggests that a low BAL recovery rate may reflect larger airways rather than the alveolar compartment in patients with COPD [4]. Generally, airway obstruction in COPD is caused both by bronchiolitis and emphysema, and loss of lung elastic recoil and accompanying increased compliance are regarded as the pathophysiological characteristics of pulmonary emphysema [4]. Furthermore, our data and previous reports showed that the BAL recovery rate was lower in regions other than the middle/lingual lobe [2, 5]. The guidelines suggest that the target site should be selected based on thin-slice CT rather than selecting the middle/lingual lobe [3], although that evidence has not been fully established [5]. The supine position of a patient during bronchoscopy might be related to the BAL recovery rate because the orifice of the middle lobe bronchus and lingula are located in areas that resist gravity [2]. Therefore, the BAL target site should be in the middle/lingual lobe on CT if abnormalities are present in the middle/lingual lobe [5]. Low recovery rates of BAL may not only lead to an inaccurate diagnosis but may also lead to an increase in adverse events [2, 17]; therefore, the BAL procedure should be avoided in bronchi with thin bronchial walls and in bronchi other than the middle/lingual lobe as much as possible. This investigation has several limitations. The study was conducted retrospectively at a single centre. Analysis of the lung volume did not take into account adjusted data based on physiques such as body weight, body length, and body mass index. It could not be analysed in some patients by using the SYNAPSE VINCENT volume analyser. The attending physician chose a target site for performing BAL. BAL was performed mainly on the middle/lingual lobe if abnormalities were present on CT and was performed on the other lobe with abnormalities if the middle/lingual lobe did not have abnormal lesions. CT scans for prebronchoscopy are usually performed approximately 1–8 weeks before bronchoscopy; therefore, the analysis of CT scans might not reflect the condition of a patient on the day of inspection. Predicted factors such as age, male sex, and COPD might be confounding factors, while previous studies report that age, male sex, and smoking history are independent predictive factors [2, 5]. However, we could only analyse three factors or less using binomial logistic regression analysis because there were 36 patients with BAL recovery failure.

Conclusion

This study shows the predicted factors for BAL recovery failure, such as a thin bronchial wall, COPD, and a target site of BAL other than the middle/lingual lobe. In particular, it is very important that a thin bronchial wall calculated in a SYNAPSE VINCENT volume analyser was related to the BAL recovery rate. It is considered that weakness of the bronchial wall might cause bronchial collapse during the BAL procedure. The area of the bronchial wall did not show significant relationships with COPD (having COPD 13.8 mm2 [11.2–15.3] vs. no COPD 14.2 mm2 [10.9–15.3], p = 0.456) in S1A Fig, a target site of BAL (middle/lingual lobe 14.1 mm2 [10.9–18.5] vs. other lobes 14.3 mm2 [11.6–22.7], p = 0.241) in S1B Fig, sex (male 13.8 mm2 [10.4–17.6] vs. female 14.8 mm2 [11.3–19.2], p = 0.169) in S1C Fig, and age (>71 years old median 14.1 mm2 [10.6–19.1] vs. ≤71 years old median 14.2 mm2 [11.2–18.6], p = 0.877) in S1D Fig. (TIF) Click here for additional data file.

Correlation with the recovery rate of bronchoalveolar lavage fluid.

(DOCX) Click here for additional data file.

The odds ratio for the BAL recovery rate failure was analysed using Pearson’s chi-squared test.

(DOCX) Click here for additional data file. 4 Aug 2022
PONE-D-22-18216
Analysis of Predicted factors for Bronchoalveolar Lavage Recovery Failure: observational study
PLOS ONE Dear Dr. Shimoda, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Sep 18 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Taeyun Kim Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf Additional Editor Comments (if provided): * I suggest tone down of the Conclusion. The study only observed, found, or showed, rather than demonstrated. * As the Reviewer pointed out, many parts of this paper overlap with the very recent study in the same country; Clin Respir J. 2022 Feb;16(2):142-151. Therefore, I suggest re-write their paper emphasizing the difference of your paper with that study;Maybe, using 3D image analysis and including target bronchus. * The Introduction section seems poor in content. I can't easily agree why a new paper using 3D image analysis and separately analyzing target bronchus is needed. In addition, the readers may not easily understand why 30% is important and why investigating a target bronchus is important. * Please fully explain what BAL recovery rate means; the % of extracted fluid after the instillation. * Line 101-101; The correlated factors of the BAL recovery rate were detected based on Spearman’s correlation analysis; Please move Statistical analysis section. * Line 164-165; I can't find the results reporting sensitivity, specificity, and accuracy. * Line 228, I can't find any results related to ROC. Also, the cut-off value was different from 30%? which was validated in a previous study; Respiration 2007;74:553–557. * Table 3; I think this is unnecessary. Given this study aims to compare the factors between failure and success group, I suggest showing the difference of baseline characteristics between those groups in Table 1. * For readability, please separate Study design and setting into 2 or 3 paragraphs. * For readability, please separate Definition section into 2 or 3 paragraphs. * I wonder the difference between upper and lower segments. Are there any difference between upper, middle/lingular, vs. lower segments? * Please do not just simply repeat the values that can be found in the Tables. For example, "the median age was 70.5 IQR 60-77" is unnecessary. Please briefly summarize the findings in Tables or Figures. For example, they could state; in univariable analysis, male sex, having comorbidity, COPD, asthma, other segment than middle/lingular, was associated with low rate of BALF. * Line 248, I suggest not stating "first" and "demonstrate". This is an observational study. Several studies have reported the factors affecting BALF. Rather, emphasizing the differences of the authors' paper between previous things; 3D, target bronchus, or airway thickness. * Line 254, please delete "to the best of our knowledge". * Line 258-261. Please re-write this section as a separate paragraph, discussing why thin bronchial wall is related to a low BALF. * Line 277-296. Too long. Please separate this section; one for COPD and another for elderly participants. * Line 297-317. Too long and exhausting to follow. * The supporting file, data.xlsx, seems unnecessary. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: My concern is that this overlaps substantially with reference 2 and I do not see what this paper adds to the literature as the findings were nearly identical. The study design is good and statistics support the conclusion. If reference 2 had not been published, I would recommend for publication, but as it does not add to the literature I cannot recommend it. Reviewer #2: Review report PONE-D-22-18216 « Analysis of Predicted factors for Bronchoalveolar Lavage Recovery Failure: observational study » Dr Shimoda and al report the results of a retrospective study looking for predictors of poor bronchoalveolar lavage (BAL) recovery rate during bronchoscopy. A poor recovery rate was determined as below 30% of the instilled liquid. Patients included were those, during the study period, who also had undergone thoracic CTscan allowing 3D image analysis of the bronchial tree. Underlying conditions (COPD), tobacco use, age, lung lobe where the BAL was performed, cross-sectional area of the dependent bronchus and area of the bronchus wall were studied as potential predictors of BAL recovery rate. The authors identified COPD, tobacco use history, BAL performed in another lobe than middle lobe or lingula and area of the bronchial wall as factors independently linked to the BAL recovery rate. The authors used 3D image analysis to study the role of bronchial area and bronchial wall area; this makes the study very original. I have few minor comments. Though I am not a native English speaker, I wander if the manuscript doesn’t need English editing throughout. Introduction and methods: The authors should indicate clearly that an inclusion criterion was the availability of a thin-slice thoracic CT scan. I am not sure that waiving the need for patient consent, even in a retrospective study, is really in accordance with the Declaration of Helsinki. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. 12 Aug 2022 Responses to the editor and the reviewers Manuscript ID PONE-D-22-18216 “Analysis of Predicted factors for Bronchoalveolar Lavage Recovery Failure: A Case–Control Study” All modifications have been highlighted in the revised manuscript. To the editor and the reviewer: Thank you very much for your constructive comments on our manuscript PONE-D-22-18216. We are pleased to hear that the reviewer found our study intriguing. In response to the reviewer’s requests and comments, we generated text and tables. We carefully studied all comments and made the necessary edits/modifications. The revised version of the manuscript has been edited by a professional English-editing service. The point-by-point responses are listed below. We hope that we have sufficiently addressed the issues raised by the reviewer. Additional Editor Comments * I suggest tone down of the Conclusion. The study only observed, found, or showed, rather than demonstrated. Response: Thank you for your comment. We agreed your comment, and changed “demonstrats” to “shows” in abstract and on page 21, line 324. * As the Reviewer pointed out, many parts of this paper overlap with the very recent study in the same country; Clin Respir J. 2022 Feb;16(2):142-151. Therefore, I suggest re-write their paper emphasizing the difference of your paper with that study;Maybe, using 3D image analysis and including target bronchus. Response: Thank you for your comment. We believe that this study can provide new important information such as the thickness of the bronchial wall on a target bronchus for BAL by using a SYNAPSE VINCENT volume analyser was the predicted factors for BAL recovery rate failure. Therefore, we understand that this manuscript should emphasize it for the difference from other study. We edited in abstract, on page 5, lines 85-89, on page 16, line 249-page 17, line 252, and on page 20, lines 326-327. * The Introduction section seems poor in content. I can't easily agree why a new paper using 3D image analysis and separately analyzing target bronchus is needed. In addition, the readers may not easily understand why 30% is important and why investigating a target bronchus is important. Response: Thank you for your comment. We considered that the common cause of BAL recovery failure might be the collapse of the bronchus, and we hypothesised that weakness of the bronchial wall might be related to a BAL recovery failure. A 3D image analysis system can evaluate a target bronchus for BAL to calculate the area of the bronchial wall; therefore, we analyzed target bronchus by using a 3D image analysis system. We modified it on page 5, lines 85-89. Furthermore, a total volume of retrieved fluid less than 30% may provide a misleading cell differential. We added it on page 5, lines 78-79. * Please fully explain what BAL recovery rate means; the % of extracted fluid after the instillation. Response: Thank you for your comment. Recovery rate was calculated as ratio of recovery fluid amount after the instillation and extracted fluid amount. We added it on page 7, lines 121-122. * Line 101-101; The correlated factors of the BAL recovery rate were detected based on Spearman’s correlation analysis; Please move Statistical analysis section. Response: Thank you for your comment. We moved it to Statistical analysis section on page 10, lines 178-179. * Line 164-165; I can't find the results reporting sensitivity, specificity, and accuracy. Response: Thank you for your comment, and we apologize for a mistake. Our manuscript did not include sensitivity and specificity; therefore, we deleted it. * Line 228, I can't find any results related to ROC. Also, the cut-off value was different from 30%? which was validated in a previous study; Respiration 2007;74:553–557. Response: Thank you for your comment. I’m sorry for sentences that are difficult to understand. The ROC was analyzed for predicting BAL recovery rate failure (<30%) in the area of the bronchial wall. We provided the ROC in figure 3, and modified it on page 15, lines 222-224. * Table 3; I think this is unnecessary. Given this study aims to compare the factors between failure and success group, I suggest showing the difference of baseline characteristics between those groups in Table 1. Response: Thank you for your comment. We agreed your ideas that the study aims were comparisons the factors between the BAL recovery failure and success groups. Therefore, Table 1 was delated, and the baseline characteristics between those groups were shown in Table 2 (Table 3 in initial version changed to table 2 in revise version). * For readability, please separate Study design and setting into 2 or 3 paragraphs. Response: Thank you for your comment. We modified to separate Study design and setting into 2 paragraphs. * For readability, please separate Definition section into 2 or 3 paragraphs. Response: Thank you for your comment. We modified to separate Definition section into 3 paragraphs. * I wonder the difference between upper and lower segments. Are there any difference between upper, middle/lingular, vs. lower segments? Response: Thank you for your comment. We compared a target site of the lung segment for performing BAL dividing into (1) the middle and lingual lobes, which are the usual lung segments for performing BAL, and (2) other segments, including the right upper and lower lobes, left segmentum apicoposterius and anterius, and left lower lobes. We described it on page 8, line 142-page 9, line 145. * Please do not just simply repeat the values that can be found in the Tables. For example, "the median age was 70.5 IQR 60-77" is unnecessary. Please briefly summarize the findings in Tables or Figures. For example, they could state; in univariable analysis, male sex, having comorbidity, COPD, asthma, other segment than middle/lingular, was associated with low rate of BALF. Response: Thank you for your comment. We edited result section. Data which described in table were deleted, and we summarized the findings. Please confirm it in result section. * Line 248, I suggest not stating "first" and "demonstrate". This is an observational study. Several studies have reported the factors affecting BALF. Rather, emphasizing the differences of the authors' paper between previous things; 3D, target bronchus, or airway thickness. Response: Thank you for your comment. We agreed your ideas, therefore “is the first report to demonstrate” was changed to “shows” on page 16, line 249. * Line 254, please delete "to the best of our knowledge". Response: Thank you for your comment. We deleted it. * Line 258-261. Please re-write this section as a separate paragraph, discussing why thin bronchial wall is related to a low BALF. * Line 277-296. Too long. Please separate this section; one for COPD and another for elderly participants. Response: Thank you for your comment. We re-write this section as a separate paragraph and discuss with elderly participants. Please confirm it on page 17, line 259-page 18, line 270. And, a description of a SYNAPSE VINCENT volume analyser such as “the system is very useful for evaluating a respiratory function, surgical simulation function, virtual bronchoscopic navigation, and other parameters” moved to methods on page 8, lines 129-131. * Line 297-317. Too long and exhausting to follow. Response: Thank you for your comment. We deleted sentence for male sex and handling physician, and it became shorter. Please confirm it. * The supporting file, data.xlsx, seems unnecessary. Response: Thank you for your comment. We agreed your ideas, therefore those files were deleted. Reviewer #1: My concern is that this overlaps substantially with reference 2 and I do not see what this paper adds to the literature as the findings were nearly identical. The study design is good and statistics support the conclusion. If reference 2 had not been published, I would recommend for publication, but as it does not add to the literature I cannot recommend it. Response: Thank you for your comments. Previous reports including reference 2 demonstrates that sex, age, bronchus used for the procedure, and having COPD are risk factors for BAL recovery failure, similar to our data. However, no report investigates a relationship between the area of the bronchial wall and BAL recovery rate, and it is importance that this study revealed the thickness of the bronchial wall on a target bronchus for BAL by using a SYNAPSE VINCENT volume analyser was the predicted factors for BAL recovery rate failure. For results in this study, it is considered that weakness of the bronchial wall might cause bronchial collapse during the BAL procedure. Therefore, we emphasized it in the manuscript, and we sincerely hope that the manuscript can provide new important information. Reviewer #2: Dr Shimoda and al report the results of a retrospective study looking for predictors of poor bronchoalveolar lavage (BAL) recovery rate during bronchoscopy. A poor recovery rate was determined as below 30% of the instilled liquid. Patients included were those, during the study period, who also had undergone thoracic CTscan allowing 3D image analysis of the bronchial tree. Underlying conditions (COPD), tobacco use, age, lung lobe where the BAL was performed, cross-sectional area of the dependent bronchus and area of the bronchus wall were studied as potential predictors of BAL recovery rate. The authors identified COPD, tobacco use history, BAL performed in another lobe than middle lobe or lingula and area of the bronchial wall as factors independently linked to the BAL recovery rate. The authors used 3D image analysis to study the role of bronchial area and bronchial wall area; this makes the study very original. Response: Thank you very much for your comment, and we are glad you reviewed our manuscript. I have few minor comments. Though I am not a native English speaker, I wander if the manuscript doesn’t need English editing throughout. Response: Thank you for your comment. The manuscript has been edited by a professional English-editing service, and the revised version has been also re-edited by a professional English-editing service. Introduction and methods: The authors should indicate clearly that an inclusion criterion was the availability of a thin-slice thoracic CT scan. Response: Thank you for your comment. For a clear inclusion criterion, we added it in study design and setting on page 6, lines 100-101. I am not sure that waiving the need for patient consent, even in a retrospective study, is really in accordance with the Declaration of Helsinki. Response: Thank you for your comment. We approved the study by the Institutional Review Board of Fukujuji Hospital. This study was conducted retrospectively, and did not include any identifiable information for patients. Therefore, the Institutional Review Board decided waving the requirement for patients consent and we applied the opt-out method. We emphasized it on page 7, lines 111-113. Submitted filename: Detailed Response to Reviewers.docx Click here for additional data file. 2 Sep 2022
PONE-D-22-18216R1
Analysis of Predicted Factors for Bronchoalveolar Lavage Recovery Failure: An Observational Study
PLOS ONE Dear Dr. Shimoda, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Oct 17 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'. A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'. An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Taeyun Kim Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: * My original comment was only deleting the "data.xlsx" which contains the individual information of all study participants, not all supplementary materials. * I would like to suggest moving Table 2 to 1 as "Baseline characteristics between the failure group and success group", comparing all variables which was included in the Table 1 of your original submission. Then, Table 1 "Factors affecting the recovery rate of BAL" could be move to Table 2. * In Table1, age is missing. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: (No Response) Reviewer #2: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: BOULAIN Thierry ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
2 Sep 2022 Responses to the editor and the reviewers Manuscript ID PONE-D-22-18216 “Analysis of Predicted factors for Bronchoalveolar Lavage Recovery Failure: A Case–Control Study” All modifications have been highlighted in the revised manuscript. To the editor and the reviewer: Thank you very much for your constructive comments on our manuscript PONE-D-22-18216. We are pleased to hear that the reviewer found our study intriguing. In response to the journal requests and editer’s comments, we generated text and tables. We carefully studied all comments and made the necessary edits/modifications. The point-by-point responses are listed below. We hope that we have sufficiently addressed the issues raised by the reviewer. Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Response: Thank you for your comment. We ensured that all references are complete and correct. edited it on references. In addition, we modified them to “Vancouver” style. Additional Editor Comments: * My original comment was only deleting the "data.xlsx" which contains the individual information of all study participants, not all supplementary materials. Response: Thank you for your comment. We re-uploaded two supplemental tables and one supplemental figure, and we described it in manuscript on page 12, line 201, page 15, lines 225-226, page 16, line 245, and on 26, lines 413-425. * I would like to suggest moving Table 2 to 1 as "Baseline characteristics between the failure group and success group", comparing all variables which was included in the Table 1 of your original submission. Then, Table 1 "Factors affecting the recovery rate of BAL" could be move to Table 2. Response: Thank you for your comment. We changed table 1 to table 2, and table 2 to table 1. And the sentence that is related with tables changed the order. * In Table1, age is missing. Response: Thank you for your comment. Age and recovery rate are continuous variables; therefore, we evaluated the correlation between age and recovery rate by using Spearman’s correlation analysis. Please confirmed it on page 12, lines 200-203. Submitted filename: Response to Reviewers.docx Click here for additional data file. 13 Sep 2022
PONE-D-22-18216R2
Analysis of Predicted Factors for Bronchoalveolar Lavage Recovery Failure: An Observational Study
PLOS ONE Dear Dr. Shimoda, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== Please submit your revised manuscript by Oct 28 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'. A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'. An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Taeyun Kim Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments (if provided): * I believe the authors have addressed almost everything the editor and reviewers raised. I have two minor comments regarding the construction of the Results section. * Please correct "The comparisons between the failure group and 194 the success group are shown in Table 2". Comparisons were shown in Table 1. And this sentence would be better to be placed at the first sentence of the 2nd paragraph of Results section. In that paragraph 3rd sentence, please remove "In univariable analysis". * Please separate the paragraph of Results section; one for supplementary Table 1 and another for main Table 2. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: (No Response) ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
14 Sep 2022 Responses to the editor and the reviewers Manuscript ID PONE-D-22-18216 “Analysis of Predicted factors for Bronchoalveolar Lavage Recovery Failure: A Case–Control Study” All modifications have been highlighted in the revised manuscript. To the editor and the reviewer: Thank you very much for your constructive comments on our manuscript PONE-D-22-18216. We are pleased to hear that the reviewer found our study intriguing. In response to the journal requests and editer’s comments, we generated text and tables. We carefully studied all comments and made the necessary edits/modifications. The point-by-point responses are listed below. We hope that we have sufficiently addressed the issues raised by the reviewer. Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Response: Thank you for your comment. We ensured that all references are complete and correct. Additional Editor Comments: * I believe the authors have addressed almost everything the editor and reviewers raised. I have two minor comments regarding the construction of the Results section. * Please correct "The comparisons between the failure group and 194 the success group are shown in Table 2". Comparisons were shown in Table 1. And this sentence would be better to be placed at the first sentence of the 2nd paragraph of Results section. In that paragraph 3rd sentence, please remove "In univariable analysis". Response: Thank you for your comment. We changed “The comparisons between the failure group and the success group are shown in Table 2.” to “in Table 1”. We moved “There were 36 patients (10.7%) in the failure group and 302 patients (89.3%) in the success group.” to the end of the 1st paragraph, and “The comparisons between the failure group and the success group are shown in Table 1” moved at the first sentence of the 2nd paragraph. Furthermore, "In univariable analysis" was removed. * Please separate the paragraph of Results section; one for supplementary Table 1 and another for main Table 2. Response: Thank you for your comment. We separated the paragraph related with Table 1 and Table 2. Submitted filename: Response to Reviewers.docx Click here for additional data file. 15 Sep 2022 Analysis of Predicted Factors for Bronchoalveolar Lavage Recovery Failure: An Observational Study PONE-D-22-18216R3 Dear Dr. Shimoda, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Taeyun Kim Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: 21 Sep 2022 PONE-D-22-18216R3 Analysis of Predicted Factors for Bronchoalveolar Lavage Recovery Failure: An Observational Study Dear Dr. Shimoda: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Taeyun Kim Academic Editor PLOS ONE
  17 in total

1.  An official American Thoracic Society clinical practice guideline: the clinical utility of bronchoalveolar lavage cellular analysis in interstitial lung disease.

Authors:  Keith C Meyer; Ganesh Raghu; Robert P Baughman; Kevin K Brown; Ulrich Costabel; Roland M du Bois; Marjolein Drent; Patricia L Haslam; Dong Soon Kim; Sonoko Nagai; Paola Rottoli; Cesare Saltini; Moisés Selman; Charlie Strange; Brent Wood
Journal:  Am J Respir Crit Care Med       Date:  2012-05-01       Impact factor: 21.405

2.  Clinical guidelines and indications for bronchoalveolar lavage (BAL): Report of the European Society of Pneumology Task Group on BAL.

Authors: 
Journal:  Eur Respir J       Date:  1990-09       Impact factor: 16.671

3.  Risk factors for acute exacerbation following bronchoalveolar lavage in patients with suspected idiopathic pulmonary fibrosis: A retrospective cohort study.

Authors:  Mitsuhiro Abe; Kenji Tsushima; Daisuke Ishii; Kohei Shikano; Keiichiro Yoshioka; Masashi Sakayori; Masaki Suzuki; Yasutaka Hirasawa; Tsukasa Ishiwata; Takeshi Kawasaki; Jun Ikari; Jiro Terada; Koichiro Tatsumi
Journal:  Adv Respir Med       Date:  2021-04-21

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Authors:  Antonio Oseas de Carvalho Filho; Aristófanes Corrêa Silva; Anselmo Cardoso de Paiva; Rodolfo Acatauassú Nunes; Marcelo Gattass
Journal:  Med Biol Eng Comput       Date:  2016-10-17       Impact factor: 2.602

5.  Is it possible to predict, whether BAL salvage is going to be diagnostic?

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Journal:  Bone Marrow Transplant       Date:  2012-12-03       Impact factor: 5.483

7.  MDCT assessment of airway wall thickness in COPD patients using a new method: correlations with pulmonary function tests.

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Journal:  Eur Radiol       Date:  2008-07-19       Impact factor: 5.315

8.  Cell recovery in bronchoalveolar lavage fluid in smokers is dependent on cumulative smoking history.

Authors:  Reza Karimi; Göran Tornling; Johan Grunewald; Anders Eklund; C Magnus Sköld
Journal:  PLoS One       Date:  2012-03-29       Impact factor: 3.240

9.  What are the factors affecting the recovery rate of bronchoalveolar lavage fluid?

Authors:  Kohei Shikano; Mitsuhiro Abe; Yuki Shiko; Kenji Tsushima; Keiichiro Yoshioka; Tsukasa Ishiwata; Takeshi Kawasaki; Jun Ikari; Jiro Terada; Yohei Kawasaki; Koichiro Tatsumi
Journal:  Clin Respir J       Date:  2021-12-06       Impact factor: 1.761

10.  Predictors for bronchoalveolar lavage recovery failure in diffuse parenchymal lung disease.

Authors:  Keigo Koda; Hironao Hozumi; Hideki Yasui; Yuzo Suzuki; Masato Karayama; Kazuki Furuhashi; Noriyuki Enomoto; Tomoyuki Fujisawa; Naoki Inui; Yutaro Nakamura; Takafumi Suda
Journal:  Sci Rep       Date:  2021-01-18       Impact factor: 4.379

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