Literature DB >> 36166154

Genomic Analysis of Surfactant-Producing Bacillus vallismortis TIM68: First Glimpse at Species Pangenome and Prediction of New Plipastatin-Like Lipopeptide.

Igor Oliveira Duarte1, Denise Cavalcante Hissa2, Bárbara Cibelle Soares Farias Quintela1, Maria Cristiane Rabelo1, Francisca Andrea da Silva Oliveira1, Nicholas Costa Barroso Lima3, Vânia Maria Maciel Melo4.   

Abstract

Surfactants are applied in several industrial processes when the modification of interface activity and the stability of colloidal systems are required. Lipopeptides are a class of microbial biosurfactants produced by species of the Bacillus genus. The present study aimed at assembling and analyzing the genome of a new Bacillus vallismortis strain, TIM68, that was shown to produce surfactant lipopeptides. The draft genome was also screened for common virulence factors and antibiotics resistance genes to investigate the strain biosafety. Comparative genomics analyses, i.e., synteny, average nucleotide identity (ANI), and pangenome, were also carried out using strain TIM68 and publicly available B. vallismortis complete and partial genomes. Three peptide synthetase operons were found in TIM68 genome, and they were surfactin A, mojavensin, and a novel plipastatin-like lipopeptide named vallisin. No virulence factors that render pathogenicity to the strain have been identified, but a region of prophage, that may contain unknown pathogenic factors, has been predicted. The pangenome of the species was characterized as closed, with 57% of genes integrating the core genome. The results obtained here on the genetic potential of TIM68 strain should contribute to its exploration in biotechnological applications.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Bioinformatics; Biosurfactant; Comparative genomics; Vallisin

Year:  2022        PMID: 36166154     DOI: 10.1007/s12010-022-04154-6

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   3.094


  46 in total

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Authors:  Prasanna K Mohan; George Nakhla; Ernest K Yanful
Journal:  Water Res       Date:  2006-01-06       Impact factor: 11.236

Review 2.  Nonribosomal Peptide Synthesis-Principles and Prospects.

Authors:  Roderich D Süssmuth; Andi Mainz
Journal:  Angew Chem Int Ed Engl       Date:  2017-03-21       Impact factor: 15.336

Review 3.  Newly isolated microorganisms with potential application in biotechnology.

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Journal:  Biotechnol Adv       Date:  2019-01-18       Impact factor: 14.227

4.  Biodegradability of bacterial surfactants.

Authors:  Tânia M S Lima; Lorena C Procópio; Felipe D Brandão; André M X Carvalho; Marcos R Tótola; Arnaldo C Borges
Journal:  Biodegradation       Date:  2010-10-30       Impact factor: 3.909

5.  Lactose oleate as new biocompatible surfactant for pharmaceutical applications.

Authors:  D R Perinelli; S Lucarini; L Fagioli; R Campana; D Vllasaliu; A Duranti; L Casettari
Journal:  Eur J Pharm Biopharm       Date:  2017-12-16       Impact factor: 5.571

6.  A comprehensive genomic and growth proteomic analysis of antitumor lipopeptide bacillomycin Lb biosynthesis in Bacillus amyloliquefaciens X030.

Authors:  Jiao Yang Lu; Kexuan Zhou; Wei Tao Huang; Pengji Zhou; Shuqing Yang; Xiaoli Zhao; Junyan Xie; Liqiu Xia; Xuezhi Ding
Journal:  Appl Microbiol Biotechnol       Date:  2019-07-27       Impact factor: 4.813

7.  Genome Sequencing and Analysis of Strains Bacillus sp. AKBS9 and Acinetobacter sp. AKBS16 for Biosurfactant Production and Bioremediation.

Authors:  Niti B Jadeja; Prachiti Moharir; Atya Kapley
Journal:  Appl Biochem Biotechnol       Date:  2018-07-10       Impact factor: 2.926

8.  Potential application of cyclic lipopeptide biosurfactants produced by Bacillus subtilis strains in laundry detergent formulations.

Authors:  A K Mukherjee
Journal:  Lett Appl Microbiol       Date:  2007-09       Impact factor: 2.858

Review 9.  Biosurfactants and surfactants interacting with membranes and proteins: Same but different?

Authors:  Daniel E Otzen
Journal:  Biochim Biophys Acta Biomembr       Date:  2016-09-30       Impact factor: 3.747

10.  Biodegradation of diesel/biodiesel blends by a consortium of hydrocarbon degraders: effect of the type of blend and the addition of biosurfactants.

Authors:  Mikołaj Owsianiak; Łukasz Chrzanowski; Alicja Szulc; Jacek Staniewski; Andrzej Olszanowski; Agnieszka K Olejnik-Schmidt; Hermann J Heipieper
Journal:  Bioresour Technol       Date:  2008-09-23       Impact factor: 9.642

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