| Literature DB >> 36166154 |
Igor Oliveira Duarte1, Denise Cavalcante Hissa2, Bárbara Cibelle Soares Farias Quintela1, Maria Cristiane Rabelo1, Francisca Andrea da Silva Oliveira1, Nicholas Costa Barroso Lima3, Vânia Maria Maciel Melo4.
Abstract
Surfactants are applied in several industrial processes when the modification of interface activity and the stability of colloidal systems are required. Lipopeptides are a class of microbial biosurfactants produced by species of the Bacillus genus. The present study aimed at assembling and analyzing the genome of a new Bacillus vallismortis strain, TIM68, that was shown to produce surfactant lipopeptides. The draft genome was also screened for common virulence factors and antibiotics resistance genes to investigate the strain biosafety. Comparative genomics analyses, i.e., synteny, average nucleotide identity (ANI), and pangenome, were also carried out using strain TIM68 and publicly available B. vallismortis complete and partial genomes. Three peptide synthetase operons were found in TIM68 genome, and they were surfactin A, mojavensin, and a novel plipastatin-like lipopeptide named vallisin. No virulence factors that render pathogenicity to the strain have been identified, but a region of prophage, that may contain unknown pathogenic factors, has been predicted. The pangenome of the species was characterized as closed, with 57% of genes integrating the core genome. The results obtained here on the genetic potential of TIM68 strain should contribute to its exploration in biotechnological applications.Entities:
Keywords: Bioinformatics; Biosurfactant; Comparative genomics; Vallisin
Year: 2022 PMID: 36166154 DOI: 10.1007/s12010-022-04154-6
Source DB: PubMed Journal: Appl Biochem Biotechnol ISSN: 0273-2289 Impact factor: 3.094