| Literature DB >> 36164437 |
Shi-Shuang Cui1,2, Ling-Yu Wu3, Gen Li1, Juan-Juan Du1, Pei Huang1, Jin Liu1, Yun Ling3, Kang Ren3, Zhong-Lue Chen3, Sheng-Di Chen1.
Abstract
Introduction: Genetic factors play an important role in Parkinson's disease (PD) risk. However, the genetic contribution to progression in Chinese PD patients has rarely been studied. This study investigated genetic associations with progression based on 30 PD risk loci common in a longitudinal cohort of Chinese PD patients and the Parkinson's Progression Markers Initiative (PPMI) cohort.Entities:
Year: 2022 PMID: 36164437 PMCID: PMC9509281 DOI: 10.1155/2022/3481102
Source DB: PubMed Journal: Parkinsons Dis ISSN: 2042-0080
Cohort demographics at baseline.
| Item | TW ( | PPMI ( |
|---|---|---|
| Median (IQR)/ | Median (IQR)/ | |
| Age of onset, yrs | 58 (9) | 60.45 (13.8) |
| Age, yrs | 63 (8.75) | 62.37 (13.99) |
| Duration, yrs | 4 (4) | 4.23 (5.28) |
| Educ: 0–6 | 3 (6.38) | 2 (0.48) |
| Educ: 7–9 | 17 (36.17) | 7 (1.69) |
| Educ: 10–12 | 13 (27.66) | 65 (15.66) |
| Educ:≥13 | 14 (29.79) | 341 (82.17) |
| Sex: male | 30 (60) | 270 (65.06) |
| Sex: female | 20 (40) | 145 (34.94) |
| Hoehn-Yahr staging | 1.5 (1) | 2 (1) |
| MDS-UPDRS | 27.5 (30) | 31 (17) |
| MDS-UPDRSI | 4 (8) | 5 (4) |
| MDS-UPDRSII | 7 (7) | 5 (5) |
| MDS-UPDRSIII | 14 (16.75) | 20 (12) |
| MDS-UPDRSIV | 0 (0) | — |
| ESS | 4.5 (5) | 5 (5) |
| HAMA or STAI | 6 (7) | 62 (24) |
| HAMD-17 or GDS | 5 (5) | 2 (2) |
| MoCA | 25 (5) | 27 (3) |
| RBD-HK or RBD-Q | 7 (23) | 3 (3.25) |
| SCOPA-AUT | 7.5 (12) | 8 (7) |
ESS, Epworth sleepiness scale score; GDS, geriatric depression scale; HAMA, Hamilton anxiety rating scale; HAMD-17, Hamilton rating scale for depression; MDS-UPDRS, MDS-unified Parkinson's disease rating scale; MoCA, Montreal cognitive assessment; PPMI, parkinson's progression markers initiative; RBD-HK, rapid eye movement sleep behavior disorder Hong Kong; RBD-Q, rapid eye movement sleep behavior disorder questionnaire; SCOPA-AUT, scales for outcomes in parkinson's disease-autonomic dysfunction; STAI, state-trait anxiety inventory for adults.
Association between SNPs and progression of the separate scale in the TW and PPMI cohorts.
| Cohort | Gene | SNP | Scale | Estimate (95% CI) |
| REF/ALT |
|---|---|---|---|---|---|---|
| PPMI |
| rs12456492 | MDS-UPDRSII | 0.286(0.104–0.468) | 0.0021562 | A/G |
| TW |
| rs1799836 | MoCA | −0.967(−1.439–0.495) | 0.0001878 | T/C |
MDS-UPDRS, MDS-unified Parkinson's disease rating scale; MoCA, Montreal cognitive assessment.
Association between SNPs and PCA progression in the TW and PPMI cohorts.
| Cohort | Gene | SNP | PC | Estimate (95% CI) |
| Type |
|---|---|---|---|---|---|---|
| PPMI |
| rs12456492 | PC1 | −0.333 (−0.536–0.131) | 0.0013333 | Motor PCA |
| TW |
| rs1799836 | PC2 | 0.402 (0.219–0.586) | 0.0000686 | Nonmotor PCA |
|
| rs1799836 | PC3 | 1.584 (0.957–2.21) | 0.0000084 | ||
|
| rs1799836 | PC1 | 0.457 (0.247–0.666) | 0.0000765 | ||
| TW |
| rs1799836 | PC1 | -−839 (−1.336–0.342) | 0.0014921 | Composite PCA |
PC, principal component; PCA, principal component analysis.
Association between haplotypes and progression in the TW and PPMI cohorts.
| Cohort | HaploBlock | Haplotype | Prog | Estimate (95% CI) |
|
|---|---|---|---|---|---|
| PPMI |
| ACAG | GDS | 6375 (3028–9721) | 0.0002068 |
| ACCA | GDS | 6375 (3028–9721) | 0.0002068 | ||
| ATCA | GDS | 6375 (3028–9721) | 0.0002068 | ||
| GCCA | GDS | 6375 (3028–9721) | 0.0002068 | ||
| GCAG | GDS | 6375 (3028–9721) | 0.0002069 | ||
| GTCA | GDS | 6719 (3192–10247) | 0.0002070 | ||
| ATCG | GDS | 6375 (3028–9721) | 0.0002068 | ||
| ACCG | GDS | 430472 (204429–656514) | 0.0002077 | ||
| ACAG | STAI | 42709 (17981–67436) | 0.0007535 | ||
| ACCA | STAI | 42709 (17982–67437) | 0.0007534 | ||
| ATCA | STAI | 42709 (17982–67436) | 0.0007534 | ||
| GCCA | STAI | 42708 (17981–67435) | 0.0007534 | ||
| GCAG | STAI | 42711 (17983–67438) | 0.0007531 | ||
| GTCA | STAI | 45020 (18954–71085) | 0.0007534 | ||
| ATCG | STAI | 42709 (17982–67436) | 0.0007534 | ||
| ACCG | STAI | 2884040 (1213734–4554345) | 0.0007563 | ||
|
| AGTGCA | Hoehn-Yahr staging | 255 (161–348) | <0.000001 | |
| PPMI |
| AGTGCA | Motor PC1 | −3090 (-4978–1201) | 0.0014101 |
GDS, geriatric depression scale; PC, principal component; STAI, state-trait anxiety inventory for adults.
Summary of polymorphisms correlated with PD progression among diverse populations.
| Correlation setting | Cohort | Polymorphism |
|---|---|---|
| Mild setting | PPMI Caucasians |
|
| All Asian |
| |
| PPMI Asian |
| |
| TW |
| |
| Strict setting | PPMI Caucasians |
|
| All Asian |
| |
| TW |
|
Figure 1Venn plot of ethnicity-stratified correlation analysis. (a) Venn plot of ethnicity-stratified correlation analysis with P < 0.05. (b) Venn plot of ethnicity-stratified correlation analysis with P < 0.002381.