| Literature DB >> 36158636 |
Wenrui Dai1, Xiaoqian Jiang1, Luca Bonomi2, Yong Li3, Hongkai Xiong3, Lucila Ohno-Machado2.
Abstract
The Cox proportional hazards model is a popular semi-parametric model for survival analysis. In this paper, we aim at developing a federated algorithm for the Cox proportional hazards model over vertically partitioned data (i.e., data from the same patient are stored at different institutions). We propose a novel algorithm, namely VERTICOX, to obtain the global model parameters in a distributed fashion based on the Alternating Direction Method of Multipliers (ADMM) framework. The proposed model computes intermediary statistics and exchanges them to calculate the global model without collecting individual patient-level data. We demonstrate that our algorithm achieves equivalent accuracy for the estimation of model parameters and statistics to that of its centralized realization. The proposed algorithm converges linearly under the ADMM framework. Its computational complexity and communication costs are polynomially and linearly associated with the number of subjects, respectively. Experimental results show that VERTICOX can achieve accurate model parameter estimation to support federated survival analysis over vertically distributed data by saving bandwidth and avoiding exchange of information about individual patients. The source code for VERTICOX is available at: https://github.com/daiwenrui/VERTICOX.Entities:
Keywords: Cox proportional hazards model; Federated survival analysis; alternating direction method of multipliers; privacy protection; vertically partitioned data
Year: 2020 PMID: 36158636 PMCID: PMC9491599 DOI: 10.1109/tkde.2020.2989301
Source DB: PubMed Journal: IEEE Trans Knowl Data Eng ISSN: 1041-4347 Impact factor: 9.235