| Literature DB >> 36155899 |
Fatma Turki, Nour Louati, Hassen Kamoun, Leila Keskes, Tarek Rebaii, Rim Frikha.
Abstract
BACKGROUND: The MTHFR gene polymorphisms are closely related to the chronic myeloid leukemia (CML). Case-control studies have associated the MTHFR polymorphisms and susceptibility to CML but the results were not conclusive. AIM: To assess this association through an update meta-analysis.Entities:
Mesh:
Substances:
Year: 2022 PMID: 36155899 PMCID: PMC9476263
Source DB: PubMed Journal: Tunis Med ISSN: 0041-4131

Figure. 1. Flow diagram for study inclusion in the meta-analysis and reasons for study exclusion
Table 1. Study characteriscs : Publication year ; ethnicity ; polymorphisms studied; number and mean age of both cases and controls
|
First author |
Publication year |
Ethnicity (country) |
Polymorphisms studied |
Cases |
Controles | ||
|
Number |
Mean Age (years) |
Number |
Mean Age (years) | ||||
|
Deligezer 2003( |
2003 |
Caucasian (Turkey) |
C677T |
131 (F/M= 70/61) |
45,9 |
161 (F/M= 112/48) |
39 |
|
Hur 2006( |
2006 |
Asian (Korea) |
C677T, A1298C |
40 (F/M= 13/27) |
50 |
200 (F/M= 72/128 |
34 |
|
Chen 2006( |
2006 |
Asian (China) |
C677T |
7 (NA) |
NA |
157 (NA) |
NA |
|
Moon 2007( |
2007 |
Asian (Korea) |
C677T, A1298C |
115 (F/M= 40/75) |
43,8 |
434 (F/M=238/19) |
41,4 |
|
Barbosa( |
2008 |
Mixed (Brasil) |
C677T, A1298C |
67 (F/M= 30/36) |
44 |
100 (F/M=47/53) |
29 |
|
Kim 2009( |
2009 |
Asian (Korea) |
C677T, A1298C |
149 (F/M= 55/94) |
50,4 |
1700 (F/M= 879/821) |
52,2 |
|
Ismail 2008( |
2009 |
Mixed (Jordan) |
C677T, A1298C |
149 (NA) |
NA |
170 (NA) |
NA |
|
Vahid 2010( |
2010 |
Mixed (Iran) |
C677T, A1298C |
38 (F/M= 19/19) |
45 |
97(F/M= 50/47) |
44,8 |
|
Jankovic 2011( |
2011 |
Caucasian (Serbia) |
C677T |
43 (NA) |
NA |
26 (NA) |
NA |
|
Lordelo 2012( |
2012 |
Caucasian |
C677T, A1298C |
41 (NA) |
NA |
155 (NA) |
NA |
|
Lordelo 2012( |
2012 |
Mixed (Brasil) |
C677T, A1298C |
64 (NA) |
NA |
118 (NA) |
NA |
|
Hussein 2012( |
2012 |
Asian (India) |
C677T |
43 (NA) |
39,5 |
251 (NA) |
41,5 |
|
Jakoljevic 2013( |
2012 |
Caucasian (Serbia) |
C677T |
52 (F/M= 24/28) |
NA |
53 (F/M= 24/30) |
NA |
|
Dorgham 2014( |
2014 |
African (Algeria) |
C677T, A1298C |
90 (NA) |
45,9 |
100 (NA) |
47,3 |
|
Banescu 2014( |
2014 |
Caucasian (Romania) |
C677T, A1298C |
151 (F/M= 65/86) |
51 |
305 (F/M= 179/126) |
47 |
|
Rabab M Aly 2014( |
2014 |
Mixed (Egypt) |
C677T, A1298C |
85 (F/M= 40/45) |
46,7 |
100 (F/M= 49/51) |
48,2 |
|
Korshied 2014( |
2014 |
MIxed (Egypt) |
C677T, A1298C |
97 (F/M= 51/46) |
NA |
130 (F/M= 68/62) |
NA |
F: female; M: male; NA: not available
Table 2. Distribution of MTHFR C677T and A1298C genotypes in cases and controls and calculation of P value.
|
Study |
Distribution of C677T MTHFR genotype(n) |
HWE P value |
Distribution of A1298 MTHFR genotype(n) |
HWE P value | ||||||||||
|
Case |
Contol |
Case |
Control | |||||||||||
|
CC |
CT |
TT |
CC |
CT |
TT |
AA |
AC |
CC |
AA |
AC |
CC | |||
|
|
72 |
50 |
9 |
74 |
73 |
14 |
0,5006 | |||||||
|
|
13 |
17 |
10 |
80 |
80 |
40 |
0,0184 |
31 |
7 |
2 |
116 |
78 |
6 |
0,0944 |
|
|
2 |
2 |
3 |
72 |
66 |
19 |
0,522 | |||||||
|
|
43 |
45 |
27 |
144 |
196 |
94 |
0,0779 |
74 |
33 |
8 |
307 |
120 |
7 |
0,2189 |
|
|
46 |
19 |
2 |
65 |
29 |
6 |
0,2701 |
41 |
23 |
3 |
63 |
32 |
5 |
0,7221 |
|
|
54 |
72 |
26 |
540 |
863 |
297 |
0,1326 |
97 |
49 |
5 |
1147 |
500 |
53 |
0,8678 |
|
|
63 |
67 |
19 |
94 |
66 |
10 |
0,722 |
59 |
68 |
22 |
76 |
81 |
13 |
0,1724 |
|
|
24 |
11 |
3 |
56 |
37 |
4 |
0,4872 |
12 |
19 |
7 |
39 |
36 |
22 |
0,0211 |
|
|
17 |
21 |
5 |
6 |
16 |
4 |
0,2247 | |||||||
|
|
15 |
21 |
5 |
74 |
66 |
15 |
0,9594 |
26 |
15 |
0 |
68 |
79 |
8 |
0,0132 |
|
|
31 |
26 |
7 |
66 |
48 |
4 |
0,1787 |
35 |
28 |
1 |
51 |
64 |
3 |
0,0844 |
|
|
28 |
8 |
7 |
180 |
61 |
10 |
0,106 | |||||||
|
|
8 |
29 |
5 |
13 |
33 |
7 |
0,057 | |||||||
|
|
8 |
35 |
40 |
48 |
38 |
3 |
0,1649 |
27 |
31 |
26 |
50 |
42 |
5 |
0,3082 |
|
|
58 |
68 |
25 |
154 |
116 |
35 |
0,0727 |
67 |
68 |
16 |
149 |
119 |
37 |
0,0868 |
|
|
30 |
44 |
11 |
45 |
49 |
6 |
0,1192 |
32 |
38 |
15 |
40 |
51 |
9 |
0 ,199 |
|
|
41 |
45 |
11 |
65 |
52 |
13 |
0,5872 |
54 |
37 |
6 |
55 |
65 |
10 |
0,1206 |
P HWE: P value for Hardy-weinberg equilibrium
Table 3 a. Odds ratio (OR), heterogeneity results and publication bias for the genetic contrasts of MTHFR gene C677T polymorphisms for CML risks.
|
Model |
Ethnicity |
Number |
Heterogeneity ‘s tests |
Association ‘s tests |
Publication bias | |||
|
I² |
P-value |
OR |
CI |
P-value |
P-value Egger’s test) | |||
|
|
Overall |
17 |
80,82% |
0,0001 |
1,28 |
[1.01; 1.63] |
0,039721 |
0,4453 |
|
African |
1 |
NA |
NA |
6,87 |
[4.27; 11.03] |
0 |
NA | |
|
Asian |
6 |
44,68% |
0,1076 |
1,04 |
[0.89; 1.22] |
0,58702 |
0,0513 | |
|
Caucasian |
5 |
66,6% |
0,0175 |
0,98 |
[0.69; 1.39] |
0,935452 |
0,3034 | |
|
Mixed |
5 |
13,94% |
0,3254 |
1,35 |
[1.12; 1.63] |
0,001918 |
0,1257 | |
|
| ||||||||
|
Overall |
17 |
63,8% |
0,0002 |
1,67 |
[1.16; 2.41] |
0,005973 |
0,1311 | |
|
African |
1 |
NA |
NA |
26,66 |
[7.8; 91.14] |
1,64E-07 |
NA | |
|
Asian |
6 |
56,57% |
0,0421 |
1,60 |
[0.97; 2.63] |
0,063045 |
0,0364 | |
|
Caucasian |
5 |
0% |
0,5732 |
1,14 |
[0.77; 1.68] |
0,508805 |
0,1149 | |
|
Mixed |
5 |
24,07% |
0,2609 |
1,78 |
[1.13; 2.8] |
0,012638 |
0,6376 | |
|
| ||||||||
|
Overall |
17 |
69,79% |
0,0001 |
1,23 |
[0.94; 1.6] |
0,127175 |
0,4733 | |
|
African |
1 |
NA |
NA |
10,97 |
[4.74; 25.42] |
2,25E-08 |
NA | |
|
Asian |
6 |
0 |
0,5513 |
0,94 |
[0.75; 1.18] |
0,586297 |
0,0904 | |
|
Caucasian |
5 |
68,69% |
0,0124 |
0,95 |
[0.57; 1.58] |
0,842135 |
0,3761 | |
|
Mixed |
5 |
0% |
0,5631 |
1,38 |
[1.08; 1.77] |
0,009783 |
0,105 | |
|
| ||||||||
|
Overall |
17 |
73,57% |
0,0001 |
1,79 |
[1.13; 2.83] |
0,01326 |
0,1821 | |
|
African |
1 |
NA |
NA |
80 |
[19.89; 321.7] |
7E-10 |
NA | |
|
Asian |
6 |
56,79% |
0,0411 |
1,53 |
[0.89; 2.65] |
0,126373 |
0,0403 | |
|
Caucasian |
5 |
44,69% |
0,1242 |
1,19 |
[0.78; 1.8] |
0,419753 |
0,1361 | |
|
Mixed |
5 |
28,73% |
0,23 |
2,05 |
[1.28; 3.28] |
0,002904 |
0,5168 | |
|
| ||||||||
|
Overall |
17 |
51,02% |
0,0082 |
1,10 |
[0.88; 1.38] |
0,397935 |
0,8322 | |
|
African |
1 |
NA |
NA |
5,53 |
[2.29; 13.29] |
0,000136 |
NA | |
|
Asian |
6 |
0% |
0,8978 |
0,84 |
[0.66; 1.08] |
0,171749 |
0,5167 | |
|
Caucasian |
5 |
61,23% |
0,0354 |
0,95 |
[0.59; 1.53] |
0,845969 |
0,4038 | |
|
Mixed |
5 |
0% |
0,8226 |
1,29 |
[1.001; 1.68] |
0,048527 |
0,0384 | |
I2 : degree of heterogenity ; OR : Odds Ratio ; IC: confidence interval

Figure 2 A. Forest plot of C677T polymorphisms and CML under the allele contrast model
Table 3 b. Odds ratio (OR), heterogeneity results and publication bias for the genetic contrasts of MTHFR gene A1298C polymorphisms for CML risks.
|
Model |
Ethnicity |
Number |
Heterogeneity ‘s tests |
Association ‘s tests |
Publication bias | |||
|
I² |
P-value |
OR |
CI |
P-value |
P-value Egger’s test) | |||
|
|
Overall |
12 |
70,61% |
0,0001 |
1,06 |
[0.85; 1.33] |
0,610745 |
0,2087 |
|
African |
1 |
NA |
NA |
2,66 |
[1.72; 4.13] |
1,17E-05 |
NA | |
|
Asian |
4 |
53,73% |
0,0903 |
1,08 |
[0.79; 1.49] |
0,616595 |
0,3436 | |
|
Caucasian |
2 |
78,63% |
0,0305 |
0,77 |
[0.37; 1.59] |
0,488287 |
NA | |
|
Mixed |
5 |
52,04% |
0,0799 |
0,99 |
[0.75; 1.31] |
0,951556 |
0,3622 | |
|
| ||||||||
|
Overall |
12 |
58,74% |
0,0052 |
1,51 |
[0.93; 2.45] |
0,097038 |
0,744 | |
|
African |
1 |
NA |
NA |
8,25 |
[2.99; 22.69] |
4,38E-05 |
NA | |
|
Asian |
4 |
56,31% |
0,0763 |
1,54 |
[0.67; 3.52] |
0,305413 |
0,7443 | |
|
Caucasian |
2 |
0% |
0,3463 |
0,80 |
[0.44; 1.48] |
0,486417 |
NA | |
|
Mixed |
5 |
0% |
0,4084 |
1,53 |
[0.97; 2.43] |
0,067319 |
0,1337 | |
|
| ||||||||
|
Overall |
12 |
60,14% |
0,0037 |
0,99 |
[0.78; 1.27] |
0,971503 |
0,1982 | |
|
African |
1 |
NA |
NA |
2,24 |
[1.22; 4.12] |
0,008968 |
NA | |
|
Asian |
4 |
60,22% |
0,0565 |
1,04 |
[0.68; 1.61] |
0,846408 |
0,5194 | |
|
Caucasian |
2 |
82,04% |
0,0183 |
0,77 |
[0.29; 1.99] |
0,590829 |
NA | |
|
Mixed |
5 |
38,73% |
0,163 |
0,91 |
[0.71; 1.16] |
0,435625 |
0,5895 | |
|
| ||||||||
|
Overall |
12 |
58,86% |
0,005 |
1,52 |
[0.92; 2.51] |
0,106747 |
0,5131 | |
|
African |
1 |
NA |
NA |
9,63 |
[3.32; 27.95] |
3,09E-05 |
NA | |
|
Asian |
4 |
44,7% |
0,1432 |
1,65 |
[0.95; 2.87] |
0,073228 |
0,944 | |
|
Caucasian |
2 |
32,95% |
0,222 |
0,88 |
[0.46; 1.66] |
0,691687 |
NA | |
|
Mixed |
5 |
25% |
0,2548 |
1,43 |
[0.88; 2.32] |
0,143511 |
0,1763 | |
|
| ||||||||
|
Overall |
12 |
46,02% |
0,0404 |
0,94 |
[0.75; 1.17] |
0,585394 |
0,133 | |
|
African |
1 |
NA |
NA |
1,37 |
[0.71; 2.64] |
0,352779 |
NA | |
|
Asian |
4 |
63,73% |
0,0407 |
0,99 |
[0.61; 1.61] |
0,980956 |
0,5831 | |
|
Caucasian |
2 |
79,93% |
0,0256 |
0,83 |
[0.33; 2.08] |
0,694699 |
NA | |
|
Mixed |
5 |
8,51% |
0,358 |
0,84 |
[0.65; 1.09] |
0,197205 |
0,7727 | |

Figure 3. Funnel plot analysis of potential publication biais. A: Funnel plots analysis for publication biais between MTHFR C677Tpolymorphism and CML ; B : Funnel plots analysis for publication biais between MTHFR A1298C polymorphism and CML.