Literature DB >> 36154189

The Complete Nucleotide Sequence of Barley Yellow Dwarf Virus-PAV from Wheat in Turkey.

Havva Ilbağı1, Rick E Masonbrink2, W Allen Miller3.   

Abstract

We report the sequence of an assembled genome of Barley yellow dwarf virus-PAV (BYDV-PAV) from Turkey. This 5,672 nucleotide RNA encodes seven known open reading frames and a possible eighth. This genome from wheat is closely related to BYDV-PAVs in Pakistan, Brazil, and Australia, including one sequenced 34 years ago.

Entities:  

Year:  2022        PMID： 36154189      PMCID： PMC9583801          DOI： 10.1128/mra.00745-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  8 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

3.  Quantification of Yield Losses Caused by Barley yellow dwarf virus in Wheat and Oats.

Authors:  S J McKirdy; R A C Jones; F W Nutter
Journal:  Plant Dis       Date:  2002-07       Impact factor: 4.438

Review 4.  Yellow Dwarf Viruses of Cereals: Taxonomy and Molecular Mechanisms.

Authors:  W Allen Miller; Zachary Lozier
Journal:  Annu Rev Phytopathol       Date:  2022-04-18       Impact factor: 10.850

Review 5.  Management of yellow dwarf disease in Europe in a post-neonicotinoid agriculture.

Authors:  Louise Mc Namara; Kevin Gauthier; Lael Walsh; Gaël Thébaud; Michael Gaffney; Emmanuel Jacquot
Journal:  Pest Manag Sci       Date:  2020-05-03       Impact factor: 4.845

6.  rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data.

Authors:  Elena Bushmanova; Dmitry Antipov; Alla Lapidus; Andrey D Prjibelski
Journal:  Gigascience       Date:  2019-09-01       Impact factor: 6.524

7.  BBMerge - Accurate paired shotgun read merging via overlap.

Authors:  Brian Bushnell; Jonathan Rood; Esther Singer
Journal:  PLoS One       Date:  2017-10-26       Impact factor: 3.240

8.  Yield Losses Caused by Barley Yellow Dwarf Virus-PAV Infection in Wheat and Barley: A Three-Year Field Study in South-Eastern Australia.

Authors:  Narelle Nancarrow; Mohammad Aftab; Grant Hollaway; Brendan Rodoni; Piotr Trębicki
Journal:  Microorganisms       Date:  2021-03-19
  8 in total

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