Literature DB >> 36154152

Draft Genome Sequences of 25 Mycobacterium marinum Strains Isolated from Animals and Environmental Components in Aquaria and an Aquaculture Farm.

Takeshi Komine1, Hanako Fukano2, Mari Inohana1, Yoshihiko Hoshino2, Osamu Kurata1, Shinpei Wada1.   

Abstract

Mycobacterium marinum is a ubiquitous nontuberculous mycobacterium that causes infections in various animals. Here, we report the annotated draft genome sequences of 25 strains isolated from vertebrates, invertebrates, and environmental components in aquaria and an aquaculture farm in Japan, sampled between 2015 and 2020.

Entities:  

Year:  2022        PMID： 36154152      PMCID： PMC9584300          DOI： 10.1128/mra.00851-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  14 in total

Review 1.  Looking in amoebae as a source of mycobacteria.

Authors:  M Drancourt
Journal:  Microb Pathog       Date:  2014-07-10       Impact factor: 3.738

2.  Association of mycobacteria in recirculating aquaculture systems and mycobacterial disease in fish.

Authors:  Roy P E Yanong; Deborah B Pouder; Joseph O Falkinham
Journal:  J Aquat Anim Health       Date:  2010-12       Impact factor: 1.625

3.  The water environment as a source of potentially pathogenic mycobacteria.

Authors:  Jitka Makovcova; Michal Slany; Vladimir Babak; Iva Slana; Petr Kralik
Journal:  J Water Health       Date:  2014-06       Impact factor: 1.744

4.  Mycobacterium marinum infection in a blue-fronted Amazon parrot (Amazona aestiva).

Authors:  David E Hannon; David A Bemis; Michael M Garner
Journal:  J Avian Med Surg       Date:  2012-12       Impact factor: 0.557

5.  CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.

Authors:  Donovan H Parks; Michael Imelfort; Connor T Skennerton; Philip Hugenholtz; Gene W Tyson
Journal:  Genome Res       Date:  2015-05-14       Impact factor: 9.043

6.  Strategies to Mitigate a Mycobacterium marinum Outbreak in a Zebrafish Research Facility.

Authors:  Timothy Mason; Kathy Snell; Erika Mittge; Ellie Melancon; Rebecca Montgomery; Marcie McFadden; Javier Camoriano; Michael L Kent; Christopher M Whipps; Judy Peirce
Journal:  Zebrafish       Date:  2016-07       Impact factor: 1.985

7.  fastp: an ultra-fast all-in-one FASTQ preprocessor.

Authors:  Shifu Chen; Yanqing Zhou; Yaru Chen; Jia Gu
Journal:  Bioinformatics       Date:  2018-09-01       Impact factor: 6.937

Review 8.  Mycobacterium marinum infection in fish and man: epidemiology, pathophysiology and management; a review.

Authors:  Emad Hashish; Abdallah Merwad; Shimaa Elgaml; Ali Amer; Huda Kamal; Ahmed Elsadek; Ayman Marei; Mahmoud Sitohy
Journal:  Vet Q       Date:  2018-12       Impact factor: 3.320

9.  Platanus_B: an accurate de novo assembler for bacterial genomes using an iterative error-removal process.

Authors:  Rei Kajitani; Dai Yoshimura; Yoshitoshi Ogura; Yasuhiro Gotoh; Tetsuya Hayashi; Takehiko Itoh
Journal:  DNA Res       Date:  2020-06-01       Impact factor: 4.458
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