Literature DB >> 36153416

Cuproptosis-related lncRNAs predict the prognosis and immune response in hepatocellular carcinoma.

Qiongyue Zhang1, Yan Huang1, Yu Xia2, Yumeng Liu1, Jianhe Gan3.   

Abstract

Cuproptosis has been recently used to indicate unique biological processes triggered by Cu action as a new term. This study aimed to explore the relationship between cuproptosis-related lncRNA and hepatocellular carcinoma (HCC) with regard to immunity and prognosis. RNA sequencing and the clinical data were downloaded from the TCGA database. The cuproptosis-related genes were sorted out through literature study. The cuproptosis-related IncRNA signature was identified by Cox regression analysis and the least absolute shrinkage and selection operator analysis. The K-M survival analysis, receiver operating characteristic analysis, and C-index analysis were adopted to evaluate the prognostic prediction performance of the signature. The functional enrichment, immune infiltration and tumor mutation analysis were further analyzed. Subsequently, we predicted the differences in chemosensitivity from tumor gene expression levels for some chemotherapy drugs. The prognostic signature consisting of 5 overall survival-related CUPlncRNAs. It showed an extraordinary ability to predict the prognoses of patients with HCC. The signature can predict the abundance of immune cell infiltration, immune functions, expression of immune checkpoint inhibitors, m6A genes, which was supported by the GO biological process and KEGG analysis. And it may also have a guiding effect in the sensitivity of different chemotherapeutic drugs and tumor mutation burden. We constructed a new cuproptosis-related lncRNA signature for HCC patients. The model can be used for prognostic prediction and immune evaluation, providing a reference for immunotherapies and targeted therapies.
© 2022. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Cuproptosis; Hepatocellular carcinoma; Immune infiltration; Long noncoding RNA; Prognosis; Tumor mutation burden

Year:  2022        PMID: 36153416     DOI: 10.1007/s10238-022-00892-3

Source DB:  PubMed          Journal:  Clin Exp Med        ISSN: 1591-8890            Impact factor:   5.057


  59 in total

1.  International trends in hepatocellular carcinoma incidence, 1978-2012.

Authors:  Jessica L Petrick; Andrea A Florio; Ariana Znaor; David Ruggieri; Mathieu Laversanne; Christian S Alvarez; Jacques Ferlay; Patricia C Valery; Freddie Bray; Katherine A McGlynn
Journal:  Int J Cancer       Date:  2019-11-05       Impact factor: 7.316

Review 2.  Hepatocellular carcinoma.

Authors:  Josep M Llovet; Jessica Zucman-Rossi; Eli Pikarsky; Bruno Sangro; Myron Schwartz; Morris Sherman; Gregory Gores
Journal:  Nat Rev Dis Primers       Date:  2016-04-14       Impact factor: 52.329

3.  Analysis of serum levels of 15 trace elements in breast cancer patients in Shandong, China.

Authors:  Xiao Ding; Meng Jiang; Haiyan Jing; Wei Sheng; Xingwen Wang; Junqing Han; Luhua Wang
Journal:  Environ Sci Pollut Res Int       Date:  2014-12-19       Impact factor: 4.223

4.  Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.

Authors:  Hyuna Sung; Jacques Ferlay; Rebecca L Siegel; Mathieu Laversanne; Isabelle Soerjomataram; Ahmedin Jemal; Freddie Bray
Journal:  CA Cancer J Clin       Date:  2021-02-04       Impact factor: 508.702

Review 5.  Epidemiology of hepatocellular carcinoma: consider the population.

Authors:  Sahil Mittal; Hashem B El-Serag
Journal:  J Clin Gastroenterol       Date:  2013-07       Impact factor: 3.062

6.  Heavy and trace metals in carcinoma of the gallbladder.

Authors:  Somprakas Basu; Manish K Singh; Tej B Singh; Satyanam K Bhartiya; Sureshwar P Singh; Vijay K Shukla
Journal:  World J Surg       Date:  2013-11       Impact factor: 3.352

Review 7.  Hepatocellular Carcinoma: Molecular Pathogenesis and Therapeutic Advances.

Authors:  Blanca Cucarull; Anna Tutusaus; Patricia Rider; Tania Hernáez-Alsina; Carlos Cuño; Pablo García de Frutos; Anna Colell; Montserrat Marí; Albert Morales
Journal:  Cancers (Basel)       Date:  2022-01-26       Impact factor: 6.639

Review 8.  Selective Targeting of Cancer Cells by Copper Ionophores: An Overview.

Authors:  Valentina Oliveri
Journal:  Front Mol Biosci       Date:  2022-03-04
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