Literature DB >> 36149586

Breaking the ICE: an easy workflow for identifying and analyzing integrative and conjugative elements in bacterial genomes.

Osiel Silva Gonçalves1, Jessica Catarine Silva de Assis1, Mateus Ferreira Santana2.   

Abstract

Entities:  

Year:  2022        PMID： 36149586     DOI： 10.1007/s10142-022-00903-2

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN： 1438-793X            Impact factor:   3.674


× No keyword cloud information.
  36 in total

1.  GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.

Authors:  J Besemer; A Lomsadze; M Borodovsky
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

2.  Tandem repeats finder: a program to analyze DNA sequences.

Authors:  G Benson
Journal:  Nucleic Acids Res       Date:  1999-01-15       Impact factor: 16.971

Review 3.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

4.  Evolution of copper resistance in the kiwifruit pathogen Pseudomonas syringae pv. actinidiae through acquisition of integrative conjugative elements and plasmids.

Authors:  Elena Colombi; Christina Straub; Sven Künzel; Matthew D Templeton; Honour C McCann; Paul B Rainey
Journal:  Environ Microbiol       Date:  2017-02-01       Impact factor: 5.491

5.  Circularization of Tn916 is required for expression of the transposon-encoded transfer functions: characterization of long tetracycline-inducible transcripts reading through the attachment site.

Authors:  J Celli; P Trieu-Cuot
Journal:  Mol Microbiol       Date:  1998-04       Impact factor: 3.501

Review 6.  The Role of Integrative and Conjugative Elements in Antibiotic Resistance Evolution.

Authors:  João Botelho; Hinrich Schulenburg
Journal:  Trends Microbiol       Date:  2020-06-11       Impact factor: 17.079

7.  Engineered integrative and conjugative elements for efficient and inducible DNA transfer to undomesticated bacteria.

Authors:  Jennifer A N Brophy; Alexander J Triassi; Bryn L Adams; Rebecca L Renberg; Dimitra N Stratis-Cullum; Alan D Grossman; Christopher A Voigt
Journal:  Nat Microbiol       Date:  2018-08-20       Impact factor: 17.745

8.  SOS response promotes horizontal dissemination of antibiotic resistance genes.

Authors:  John W Beaber; Bianca Hochhut; Matthew K Waldor
Journal:  Nature       Date:  2003-12-21       Impact factor: 49.962

9.  Differential regulation of two closely related integrative and conjugative elements from Streptococcus thermophilus.

Authors:  Nicolas Carraro; Virginie Libante; Catherine Morel; Bernard Decaris; Florence Charron-Bourgoin; Pierre Leblond; Gérard Guédon
Journal:  BMC Microbiol       Date:  2011-10-24       Impact factor: 3.605

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.