Literature DB >> 36147828

A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential.

Nikoline S Olsen1, Niels Bohse Hendriksen1, Lars H Hansen2, Witold Kot2.   

Abstract

Bacteriophage therapy and application of phages for biocontrol necessitate acquisition of suitable phages. The exclusivity of phage-host relations and the risk of phage resistance instigate a need to rapidly isolate and characterize novel phages and continually build sizeable phage libraries. Current methods for phage isolation are both laborious and time consuming, suitable for the isolation of a limited number of phages. The high-throughput screening method for phages upscales and organizes enrichment of phages for fast isolation and identification of potentially hundreds of distinct phages against single hosts. This enables screening of hundreds of samples, in multiple simultaneous setups with varying parameters, increasing the likelihood of isolating multiple distinct phages specific for the given conditions. The efficiency of the method is emphasized by our screening of 200 environmental samples, resulting in the identification of an abundance of unique phage species virulent to Escherichia coli, Salmonella enterica, Enterococcus faecalis, and Pseudomonas aeruginosa. Copyright 2020, Mary Ann Liebert, Inc., publishers.

Entities:  

Keywords:  bacteriophage; high-throughput; phage isolation; phage therapy; wastewater

Year:  2020        PMID: 36147828      PMCID: PMC9041460          DOI: 10.1089/phage.2020.0016

Source DB:  PubMed          Journal:  Phage (New Rochelle)        ISSN: 2641-6530


  39 in total

1.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

2.  Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance.

Authors:  A-P Magiorakos; A Srinivasan; R B Carey; Y Carmeli; M E Falagas; C G Giske; S Harbarth; J F Hindler; G Kahlmeter; B Olsson-Liljequist; D L Paterson; L B Rice; J Stelling; M J Struelens; A Vatopoulos; J T Weber; D L Monnet
Journal:  Clin Microbiol Infect       Date:  2011-07-27       Impact factor: 8.067

3.  Genomic Diversity of Phages Infecting Probiotic Strains of Lactobacillus paracasei.

Authors:  Diego J Mercanti; Geneviève M Rousseau; María L Capra; Andrea Quiberoni; Denise M Tremblay; Simon J Labrie; Sylvain Moineau
Journal:  Appl Environ Microbiol       Date:  2015-10-16       Impact factor: 4.792

4.  Bacteriophage applications: where are we now?

Authors:  A B Monk; C D Rees; P Barrow; S Hagens; D R Harper
Journal:  Lett Appl Microbiol       Date:  2010-08-26       Impact factor: 2.858

5.  Phage Therapy: Considerations and Challenges for Development.

Authors:  Rebecca Reindel; Cara R Fiore
Journal:  Clin Infect Dis       Date:  2017-06-01       Impact factor: 9.079

6.  Identification of acquired antimicrobial resistance genes.

Authors:  Ea Zankari; Henrik Hasman; Salvatore Cosentino; Martin Vestergaard; Simon Rasmussen; Ole Lund; Frank M Aarestrup; Mette Voldby Larsen
Journal:  J Antimicrob Chemother       Date:  2012-07-10       Impact factor: 5.790

7.  Automated classification of tailed bacteriophages according to their neck organization.

Authors:  Anne Lopes; Paulo Tavares; Marie-Agnès Petit; Raphaël Guérois; Sophie Zinn-Justin
Journal:  BMC Genomics       Date:  2014-11-27       Impact factor: 3.969

8.  Streamlining standard bacteriophage methods for higher throughput.

Authors:  Kathryn M Kauffman; Martin F Polz
Journal:  MethodsX       Date:  2018-01-31

Review 9.  Framing the Future with Bacteriophages in Agriculture.

Authors:  Antonet Svircev; Dwayne Roach; Alan Castle
Journal:  Viruses       Date:  2018-04-25       Impact factor: 5.048

10.  Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment.

Authors:  Nikoline S Olsen; Laura Forero-Junco; Witold Kot; Lars H Hansen
Journal:  Viruses       Date:  2020-09-04       Impact factor: 5.048

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