| Literature DB >> 36144737 |
Dechao Feng1, Weizhen Zhu1, Jia You1, Xu Shi1, Ping Han1, Wuran Wei1, Qiang Wei1, Lu Yang1.
Abstract
BACKGROUND: We aimed to explore the role of mitochondrial aldehyde dehydrogenase 2 (ALDH2) in prostate cancer (PCa) patients and provide insights into the tumor immune microenvironment (TME) for those patients undergoing radical radiotherapy.Entities:
Keywords: biochemical recurrence; competing endogenous RNA network; mitochondrial aldehyde dehydrogenase 2; prostate cancer; tumor immune microenvironment
Mesh:
Substances:
Year: 2022 PMID: 36144737 PMCID: PMC9500792 DOI: 10.3390/molecules27186000
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.927
Figure 1The clinical values of ALDH2 in prostate cancer. (A) Venn plot showing through the intersection of DEGs of TCGA database and GEO datasets, and gene sets of fatty acid metabolism; (B) Kaplan–Meier curve of ALDH2 for BCR-free survival; (C) Kaplan–Meier curve of ALDH2 for metastasis-free survival; (D) Kaplan–Meier curve of ALDH2 for BCR-free survival in TCGA database; (E) volcano plot showing DEGs in TCGA database; (F) volcano plot showing DEGs in GEO datasets; (G) differential expression of ALDH2 between tumor and normal tissues at protein level; (H) differential mRNA expression of ALDH2 between tumor and normal sample at pan-cancer level in TCGA database; (I) comparison between ALDH2 and T stages; (J) comparison between ALDH2 and Gleason score; (K) comparison between ALDH2 and BCR; (L) ROC curve of ALDH2 discriminating BCR from no BCR; (M) comparison between ALDH2 and Gleason score in TCGA database; (N) comparison between ALDH2 and T stages in TCGA database; (O) comparison between ALDH2 and N stages in TCGA database; (P) ROC curve of discriminating drug resistance from drug sensitivity; and (Q) ROC curve of discriminating radiation resistance from radiation sensitivity. DEG = differentially expressed genes; BCR = biochemical recurrence; ROC= receiver operating characteristic curve. ns, 0.05; *, 0.05; **, 0.01, and ***, 0.001.
Figure 2TME analysis and gene interaction with ALDH2. (A) Comparison between BCR and no BCR groups for the 46 immune checkpoints; (B) bubble plot showing correlations between ALDH2 and immune checkpoints with statistical significance; (C) Kaplan–Meier curve of CD96 for BCR-free survival; (D) Kaplan–Meier curve of NRP1 for BCR-free survival; (E) comparison between BCR and no BCR groups for the TME parameters; (F) radar plot showing correlations between ALDH2 and the TME parameters; (G) Kaplan–Meier curve of neutrophils for BCR-free survival; (H) Kaplan–Meier curve of immune score for BCR-free survival; (I) Kaplan–Meier curve of stromal score for BCR-free survival; (J) Kaplan–Meier curve of estimate score for BCR-free survival; (K) Kaplan–Meier curve of tumor purity for BCR-free survival; and (L) network plot showing genes interacted with ALDH2. TME = tumor immune microenvironment; BCR = biochemical recurrence.ns, 0.05; *, 0.05.
Figure 3Functional enrichment analysis, ceRNA network, and drug analysis. (A) Gene set enrichment analysis; (B) comparison between tumor and normal groups for PART1; (C) comparison between BCR and no BCR groups for PART1; (D) Kaplan–Meier curve of PART1 for BCR-free survival; (E) ceRNA network; and (F) Venn plot showing the commonly sensitive drugs to ALDH2. ceRNA = competing endogenous RNA; BCR = biochemical recurrence. ns, 0.05; *, 0.05; and ***, 0.001.