Literature DB >> 36138093

Bacterial diversity in surface sediments of collapsed lakes in Huaibei, China.

Zijian Shen1, Zijian Shang1, Faxin Wang1, Yanhong Liang1, Youcun Zou1, Fei Liu2.   

Abstract

The collapse lake area due to coal mining in Huaibei shows high biodiversity, but the bacterial community composition and diversity in the lake sediments are still rarely studied. Therefore, based on 16S rRNA high-throughput sequencing and combined with analysis of environmental factors, we comparatively analyzed the bacterial community composition and diversity of surface sediments from East Lake (DH) and South Lake (NH) and Middle Lake (ZH) in the collapse lake area of Huaibei. The bacterial community compositions are significantly different in the sediments among Huaibei collapsed lakes, with DH having the largest number of species, and NH having a higher species diversity. Pseudomonadota is the most abundant phylum in the sediments of DH and NH, while the most abundant phyla in ZH are Bacteroidales, Chloroflexales, Acidobacteriales, and Firmicutes. Anaerolineae (24.05% ± 0.20%) is the most abundant class in the DH sediments, and Gammaproteobacteria (25.94% ± 0.40%) dominates the NH sediments, Bacteroidia (32.12% ± 1.32%) and Clostridia (21.98% ± 0.90%) contribute more than 50% to the bacteria in the sediments of ZH. Redundancy analysis (RDA) shows that pH, TN, and TP are the main environmental factors affecting the bacterial community composition in the sediments of the collapsed lake area. The results reveal the bacterial community composition and biodiversity in the sediments of the Huaibei coal mining collapsed lakes, and provide new insights for the subsequent ecological conservation and restoration of the coal mining collapsed lakes.
© 2022. The Author(s).

Entities:  

Year:  2022        PMID: 36138093     DOI: 10.1038/s41598-022-20148-0

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.996


  31 in total

1.  Deep sub-seafloor prokaryotes stimulated at interfaces over geological time.

Authors:  R John Parkes; Gordon Webster; Barry A Cragg; Andrew J Weightman; Carole J Newberry; Timothy G Ferdelman; Jens Kallmeyer; Bo B Jørgensen; Ivano W Aiello; John C Fry
Journal:  Nature       Date:  2005-07-21       Impact factor: 49.962

Review 2.  The microbial engines that drive Earth's biogeochemical cycles.

Authors:  Paul G Falkowski; Tom Fenchel; Edward F Delong
Journal:  Science       Date:  2008-05-23       Impact factor: 47.728

3.  Ocean plankton. Structure and function of the global ocean microbiome.

Authors:  Shinichi Sunagawa; Luis Pedro Coelho; Samuel Chaffron; Jens Roat Kultima; Karine Labadie; Guillem Salazar; Bardya Djahanschiri; Georg Zeller; Daniel R Mende; Adriana Alberti; Francisco M Cornejo-Castillo; Paul I Costea; Corinne Cruaud; Francesco d'Ovidio; Stefan Engelen; Isabel Ferrera; Josep M Gasol; Lionel Guidi; Falk Hildebrand; Florian Kokoszka; Cyrille Lepoivre; Gipsi Lima-Mendez; Julie Poulain; Bonnie T Poulos; Marta Royo-Llonch; Hugo Sarmento; Sara Vieira-Silva; Céline Dimier; Marc Picheral; Sarah Searson; Stefanie Kandels-Lewis; Chris Bowler; Colomban de Vargas; Gabriel Gorsky; Nigel Grimsley; Pascal Hingamp; Daniele Iudicone; Olivier Jaillon; Fabrice Not; Hiroyuki Ogata; Stephane Pesant; Sabrina Speich; Lars Stemmann; Matthew B Sullivan; Jean Weissenbach; Patrick Wincker; Eric Karsenti; Jeroen Raes; Silvia G Acinas; Peer Bork
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

Review 4.  Ten years of next-generation sequencing technology.

Authors:  Erwin L van Dijk; Hélène Auger; Yan Jaszczyszyn; Claude Thermes
Journal:  Trends Genet       Date:  2014-08-06       Impact factor: 11.639

5.  Distinct distribution patterns of prokaryotes between sediment and water in the Yellow River estuary.

Authors:  Guangshan Wei; Mingcong Li; Fenge Li; Han Li; Zheng Gao
Journal:  Appl Microbiol Biotechnol       Date:  2016-08-24       Impact factor: 4.813

Review 6.  Prokaryotes: the unseen majority.

Authors:  W B Whitman; D C Coleman; W J Wiebe
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

7.  Sediment microbial taxonomic and functional diversity in a natural salinity gradient challenge Remane's "species minimum" concept.

Authors:  Christina Pavloudi; Jon B Kristoffersen; Anastasis Oulas; Marleen De Troch; Christos Arvanitidis
Journal:  PeerJ       Date:  2017-10-13       Impact factor: 2.984

8.  Shifts among Eukaryota, Bacteria, and Archaea define the vertical organization of a lake sediment.

Authors:  Christian Wurzbacher; Andrea Fuchs; Katrin Attermeyer; Katharina Frindte; Hans-Peter Grossart; Michael Hupfer; Peter Casper; Michael T Monaghan
Journal:  Microbiome       Date:  2017-04-08       Impact factor: 14.650

9.  Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing.

Authors:  Kyunghoi Kim
Journal:  Microbiol Resour Announc       Date:  2018-10-11

10.  Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal.

Authors:  Balamurugan Sadaiappan; Chinnamani Prasannakumar; Kumaran Subramanian; Mahendran Subramanian
Journal:  Data Brief       Date:  2018-12-14
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.