| Literature DB >> 36135493 |
Minli Dai1, Jin Yang1, Xinyi Liu1, Haoyi Gu1, Fanchi Li1,2, Bing Li1,2, Jing Wei1,2,3.
Abstract
The dipteran tachinid parasitoids are important biocontrol agents, and they must survive the harsh environment and rely on the resources of the host insect to complete their larval stage. We have previously demonstrated that the parasitism by the tachinid parasitoid Exoristajaponica, a pest of the silkworm, causes pupation defects in Bombyx mori. However, the underlying mechanism is not fully understood. Here, we performed transcriptome analysis of the fat body of B. mori parasitized by E. japonica. We identified 1361 differentially expressed genes, with 394 genes up-regulated and 967 genes down-regulated. The up-regulated genes were mainly associated with immune response, endocrine system and signal transduction, whereas the genes related to basal metabolism, including energy metabolism, transport and catabolism, lipid metabolism, amino acid metabolism and carbohydrate metabolism were down-regulated, indicating that the host appeared to be in poor nutritional status but active in immune response. Moreover, by time-course gene expression analysis we found that genes related to amino acid synthesis, protein degradation and lipid metabolism in B. mori at later parasitization stages were inhibited. Antimicrobial peptides including Cecropin A, Gloverin and Moricin, and an immulectin, CTL11, were induced. These results indicate that the tachinid parasitoid perturbs the basal metabolism and induces the energetically costly immunity of the host, and thus leading to incomplete larval-pupal ecdysis of the host. This study provided insights into how tachinid parasitoids modify host basal metabolism and immune response for the benefit of developing parasitoid larvae.Entities:
Keywords: Bombyx mori; basal metabolism; immune response; tachinid parasitoid; transcriptome
Year: 2022 PMID: 36135493 PMCID: PMC9506100 DOI: 10.3390/insects13090792
Source DB: PubMed Journal: Insects ISSN: 2075-4450 Impact factor: 3.139
Figure 1Global transcriptomic changes in the fat body of parasitized B. mori. (A) The parasitized and nonparasitized B. mori and an E. japonica larva with a respiratory funnel developed within the host. White bars, 1 cm; black bar, 100 μm. (B) A cluster analysis of 6 samples. P, the parasitized silkworms; NP, nonparasitized controls. (C) Number of DEGs after E. japonica parasitism. Up, up-regulated genes. Down, down-regulated genes. (D) Validation of ten DEGs by RT-qPCR analysis. CecA, cecropin A; PGRP-LB, peptidoglycan recognition protein-LB; Mor1, moricin1; ATG16L1, autophagy-related protein 16-like; HSP70, heat shock protein 70; FASN, fatty acid synthase; Mdh, malate dehydrogenase; Gdh, glutamate dehydrogenase; Aifm1, apoptosis-inducing factor isoform X1. All transcriptional data were normalized to the expression level of Rp49.
Figure 2Summary of gene ontology (GO) classification of differentially expressed genes in B. mori. The upper top x-axis represents the proportion of the percentage of the number of genes corresponding to the function, and the lower x-axis represents the number of genes corresponding to the function. Up, up-regulated genes; Down, down-regulated genes. BP, biological process; CC, cellular component; MF, molecular function.
KEGG pathway enrichment analysis of DEGs in B. mori after parasitization.
| Category | KEGG Term | KO ID | Input/Background | |
|---|---|---|---|---|
| Up-regulated DEGs | Antigen processing and presentation | ko04612 | 7/24 | 1.19 × 10−5 |
| Estrogen signaling pathway | ko04915 | 6/38 | 0.001819 | |
| Isoquinoline alkaloid biosynthesis | ko00950 | 2/5 | 0.011286 | |
| MAPK signaling pathway | ko04010 | 6/60 | 0.017507 | |
| Protein processing in endoplasmic reticulum | ko04141 | 9/122 | 0.026165 | |
| Indole alkaloid biosynthesis | ko00901 | 1/1 | 0.034861 | |
| Arginine biosynthesis | ko00220 | 3/23 | 0.044288 | |
| Down-regulated DEGs | Oxidative phosphorylation | ko00190 | 34/131 | 8.86 × 10−11 |
| Phagosome | ko04145 | 15/65 | 7.89 × 10−5 | |
| Thermogenesis | ko04714 | 28/177 | 0.000146 | |
| Cardiac muscle contraction | ko04260 | 11/42 | 0.000216 | |
| Gap junction | ko04540 | 10/41 | 0.00077 | |
| Valine, leucine and isoleucine biosynthesis | ko00290 | 4/7 | 0.000961 | |
| Carbon metabolism | ko01200 | 16/144 | 0.011988 | |
| Biosynthesis of amino acids | ko01230 | 11/69 | 0.014215 | |
| Fatty acid biosynthesis | ko00061 | 5/21 | 0.018282 | |
| Pyruvate metabolism | ko00620 | 6/32 | 0.031156 | |
| Cutin, suberine and wax biosynthesis | ko00073 | 5/24 | 0.03165 | |
| Two-component system | ko02020 | 5/24 | 0.03165 | |
| Collecting duct acid secretion | ko04966 | 4/17 | 0.035501 | |
| Retrograde endocannabinoid signaling | ko04723 | 10/71 | 0.041068 |
Classification of DEGs involved in host energy and nutrient metabolism.
| Category | Sequence ID | Gene Name | DEGs (log2 Value) | |
|---|---|---|---|---|
| Oxidative phosphorylation | BMSK0000124 | probable DH dehydrogenase | −3.11178 | 6.97 × 10−14 |
| BMSK0000321 | DH-ubiquinone oxidoreductase subunit 8 | −4.38754 | 1.23 × 10−23 | |
| BMSK0000411 | DH-ubiquinone oxidoreductase B18 subunit | −11.2037 | 2.38 × 10−15 | |
| BMSK0000424 | cytochrome b-c1 complex subunit Rieske | −4.3818 | 2.22 × 10−29 | |
| BMSK0000434 | V-type proton ATPase 116 kDa subunit a isoform 1-like | −5.4141 | 1.12 × 10−21 | |
| BMSK0000861 | cytochrome c oxidase subunit 7A1 | −1.37335 | 1.76 × 10−5 | |
| BMSK0000858 | cytochrome c oxidase subunit 7C | −11.654 | 4.86 × 10−13 | |
| BMSK0000687 | ATP synthase subunit gamma | −2.69535 | 1.22 × 10−11 | |
| BMSK0000635 | succinate dehydrogenase | −5.56853 | 1.17 × 10−39 | |
| BMSK0006733 | cytochrome oxidase c subunit Vib | −4.17749 | 6.85 × 10−25 | |
| BMSK0005384 | probable DH dehydrogenase | −5.3812 | 6.98 × 10−30 | |
| BMSK0003855 | cytochrome c oxidase subunit 5B | −5.06134 | 1.02 × 10−33 | |
| BMSK0002658 | DH dehydrogenase [ubiquinone] iron-sulfur protein 3 | −4.08797 | 9.99 × 10−19 | |
| BMSK0002109 | DH-ubiquinone oxidoreductase 49 kDa subunit | −4.49602 | 1.29 × 10−23 | |
| BMSK0008624 | cytochrome c oxidase subunit 6A2 | −4.38976 | 8.49 × 10−38 | |
| BMSK0007592 | cytochrome b-c1 complex subunit 8-like | −4.60053 | 3.50 × 10−35 | |
| Nitrogen metabolism | BMSK0000310 | glutamine synthetase 2 cytoplasmic isoform X2 | 1.236855 | 4.63 × 10−5 |
| BMSK0004749 | carbonic anhydrase 1 isoform X1 | −4.69514 | 2.09 × 10−23 | |
| BMSK0004746 | putative carbonic anhydrase | −4.88355 | 8.85 × 10−16 | |
| Amino acid metabolism | BMSK0006194 | alanine aminotransferase 1 | 9.384746 | 1.72 × 10−71 |
| BMSK0005711 | inducible nitric oxide synthase-like protein | 2.269884 | 2.81 × 10−11 | |
| BMSK0005320 | glutamine synthetase 1 | −9.03892 | 4.01 × 10−9 | |
| BMSK0003612 | glutamate dehydrogenase | −4.376969 | 2.28 × 10−25 | |
| BMSK0007733 | malate dehydrogenase 1 | −5.259740 | 3.16 × 10−41 | |
| Carbohydrate metabolism | BMSK0005441 | multiple inositol polyphosphate phosphatase 1 | −1.011 | 0.001744 |
| BMSK0004863 | pyruvate kinase-like isoform X4 | −3.59947 | 7.08 × 10−10 | |
| BMSK0000610 | aldose 1-epimerase isoform X1 | −4.00298 | 1.71 × 10−32 | |
| BMSK0000507 | enolase | −4.57115 | 9.42 × 10−36 | |
| BMSK0014846 | alcohol dehydrogenase | −4.72435 | 2.26 × 10−33 | |
| BMSK0014852 | 1,5-anhydro-D-fructose reductase | −3.14956 | 3.56 × 10−12 | |
| BMSK0003272 | malate dehydrogenase isoform X1 | −1.35844 | 1.10 × 10−5 | |
| BMSK0004863 | pyruvate kinase-like isoform X4 | −3.59947 | 7.08 × 10−10 | |
| BMSK0004862 | pyruvate kinase, alpha/beta domain | −4.3419 | 4.16 × 10−12 | |
| BMSK0001495 | glyoxylate reductase/hydroxypyruvate reductase | −2.55827 | 3.15 × 10−14 | |
| BMSK0012704 | glutamine synthetase 2 cytoplasmic-like | −6.05855 | 2.51 × 10−28 | |
| BMSK0000686 | glycine cleavage system H protein-like | −3.09021 | 1.93 × 10−17 | |
| BMSK0000636 | succinate dehydrogenase cytochrome b560 subunit | −6.39877 | 6.41 × 10−21 | |
| BMSK0004075 | chitinase isoform X1 | 1.200746 | 0.000638 | |
| BMSK0004232 | beta-N-acetylglucosaminidase 2 precursor | 1.370167 | 4.74 × 10−5 | |
| BMSK0007975 | glucosamine-6-phosphate isomerase isoform X1 | 1.569734 | 4.96 × 10−7 | |
| BMSK0006682 | cysteine sulfinic acid decarboxylase | 5.528822 | 1.15 × 10−26 | |
| BMSK0016012 | UDP-glycosyltransferase UGT33D8 | 1.353298 | 0.000243 | |
| BMSK0014767 | uridine diphosphate glucosyltransferase | 6.283757 | 1.71 × 10−28 | |
| Lipid metabolism | BMSK0009526 | fatty acid synthase | −2.72055 | 3.34 × 10−13 |
| BMSK0009516 | acyl transferase domain | −2.04429 | 1.07 × 10−9 | |
| BMSK0013704 | fatty acyl-CoA reductase wat-like | −2.961012 | 1.66 × 10−10 | |
| BMSK0004409 | gamma-glutamyl transpeptidase isoform X1 | −3.172825 | 5.65 × 10−21 | |
| BMSK0004474 | lysophospholipid acyltransferase 7 isoform X2 | −5.22114 | 2.42 × 10−23 | |
| BMSK0007012 | non-lysosomal glucosylceramidase | −2.26115 | 9.35 × 10−10 | |
| BMSK0013693 | fatty-acyl CoA reductase 2 | −1.07664 | 0.003835 | |
| BMSK0005884 | UDP-glycosyltransferase UGT48C1 precursor | 2.373975 | 7.55 × 10−7 | |
| BMSK0009441 | phospholipase A2-like | 2.619790 | 1.01 × 10−14 | |
| BMSK0003963 | uridine diphosphate glucosyltransferase precursor | 6.808911 | 5.44 × 10−42 |
Figure 3Effects of E. japonica parasitism on the expression levels of genes involved in amino acid and protein metabolism, carbohydrate metabolism, and lipid biosynthesis of B. mori at 3-, 5-, 7- and 8-DAP. (A) The relative expression levels of genes involved in amino acid and protein metabolism. (B) Expression levels of metabolic genes involved in glycolysis pathway. (C) RT-qPCR analysis of the expression levels of key enzymes involved in lipid biosynthesis. All transcriptional data were normalized to the expression level of Rp49. The statistical significance is indicated by * p < 0.05, ** p < 0.01 or *** p < 0.001. The results are shown as the mean ± S. D.
Summary of development-related DEGs induced by E. japonica parasitism.
| Sequence ID | Gene Name | DEGs (log2 Value) | |
|---|---|---|---|
| BMSK0005887 | facilitated trehalose transporter Tret1-like | 3.53769 | 2.27 × 10−8 |
| BMSK0014493 | juvenile hormone esterase-like isoform X2 | 2.9759 | 3.63 × 10−8 |
| BMSK0014862 | ecdysteroid-phosphate phosphatase | 1.958563 | 2.08 × 10−9 |
| BMSK0013050 | juvenile hormone binding protein an-0128 precursor | 1.777608 | 2.12 × 10−6 |
| BMSK0010481 | ecdysteroid-regulated 16 kDa protein | −1.74256 | 3.15 × 10−7 |
| BMSK0013317 | hemolymph juvenile hormone binding protein precursor | −1.01676 | 0.000499 |
| BMSK0008902 | juvenile hormone binding protein brP-1649 precursor | −3.73864 | 2.83 × 10−10 |
Summary of DEGs involved in cellular immune response of the parasitized silkworm.
| Sequence ID | Gene Name | DEGs (log2 Value) | |
|---|---|---|---|
| BMSK0014004 | hemolin isoform X1 | 2.879532 | 1.24 × 10−9 |
| BMSK0005301 | hemocytin | −1.54542 | 1.14 × 10−6 |
| BMSK0015652 | scavenger receptor type C precursor | −1.55632 | 3.58 × 10−6 |
| BMSK0013731 | scavenger receptor class B member 1 isoform X2 | −1.69213 | 1.99 × 10−7 |
| BMSK0002618 | very low-density lipoprotein receptor | 1.666729 | 3.83 × 10−8 |
| BMSK0001793 | integrin beta4 | 1.163103 | 0.001039 |
| BMSK0001792 | integrin beta3 | −1.78043 | 9.31 × 10−5 |
| BMSK0008195 | intraflagellar transport protein 46 homolog isoform X3 | −3.71239 | 3.53 × 10−12 |
| BMSK0001621 | dynein intermediate chain 3 | −4.69828 | 1.14 × 10−22 |
| BMSK0005812 | tetratricopeptide repeat protein 30A | −3.65764 | 1.69 × 10−14 |
| BMSK0007120 | cytoplasmic dynein 2 light intermediate chain 1 isoform X1 | −3.93271 | 1.86 × 10−17 |
| BMSK0014572 | intraflagellar transport protein 20 homolog | −2.88381 | 2.26 × 10−11 |
| BMSK0009828 | dynein assembly factor 5 | −2.04465 | 5.92 × 10−10 |
| BMSK0014854 | dynein beta chain | −2.94315 | 1.05 × 10−20 |
| BMSK0011063 | dynein intermediate chain 2 | −4.95565 | 6.14 × 10−33 |
| BMSK0015762 | tektin-4 | −4.38482 | 6.12 × 10−29 |
| BMSK0015667 | heat shock protein 83 | 1.229242 | 6.17 × 10−7 |
| BMSK0009364 | centromere protein J | −1.20679 | 6.56 × 10−5 |
| BMSK0002250 | intraflagellar transport protein 80 homolog isoform X1 | −3.18285 | 1.22 × 10−14 |
| BMSK0000038 | actin-85C | −3.57324 | 1.38 × 10−21 |
| BMSK0009907 | cytoplasmic A3 | 1.491502 | 6.72 × 10−9 |
| BMSK0015598 | tubulin beta chain isoform X1 | −1.04303 | 0.004396 |
| BMSK0009003 | beta-tubulin | −4.27001 | 6.91 × 10−44 |
| BMSK0015598 | tubulin beta chain | −4.74837 | 4.3 × 10−45 |
| BMSK0000091 | tubulin alpha-1 chain | −4.34691 | 9.12 × 10−44 |
| BMSK0003474 | tektin-B1 | −4.70582 | 6.68 × 10−38 |
Figure 4Transcriptional characteristics of immune-related genes induced by E. japonica parasitism. (A) The relative expression levels of cellular-immunity-related genes. (B) The relative expression levels of AMP genes. (C) The relative expression levels of Toll, IMD pathway genes and JAK/STAT pathway genes. All transcriptional levels were normalized to the expression level of Rp49. The statistical significance is indicated by * p < 0.05, ** p < 0.01 or *** p < 0.001. The results are shown as the mean ± S.D.
Humoral-immune-response-related genes.
| Sequence ID | Gene Name | DEGs (log2 Value) | |
|---|---|---|---|
| BMSK0009350 | peptidoglycan-recognition protein LB-like | 11.52585 | 1.75 × 10−15 |
| BMSK0004848 | peptidoglycan recognition protein S2 | 6.973384 | 2.01 × 10−58 |
| BMSK0009349 | peptidoglycan recognition protein S6 precursor | 6.245274 | 1.51 × 10−47 |
| BMSK0006299 | beta-1,3-glucan recognition protein 3 isoform X2 | 1.40262 | 1.33 × 10−5 |
| BMSK0012017 | serine protease 7 precursor | 7.447781 | 5.12 × 10−51 |
| BMSK0009527 | thioesterase domain | −2.45384 | 1.44 × 10−10 |
| BMSK0012018 | serine protease snake | 5.39302 | 3.76 × 10−39 |
| BMSK0015991 | serpin 5 | 1.5216 | 2.88 × 10−6 |
| BMSK0008651 | serine protease inhibitor 6 isoform X1 | 5.430386 | 2.04 × 10−42 |
| BMSK0003816 | serine protease inhibitor 12 isoform X1 | 1.555923 | 1.16 × 10−6 |
| BMSK0003812 | serine protease inhibitor 3 isoform X1 | 1.338882 | 3.74 × 10−5 |
| BMSK0003441 | angiotensin-converting enzyme | −1.99032 | 6.07 × 10−7 |
| BMSK0015864 | lysozyme-like | 1.688813 | 2.42 × 10−8 |
| BMSK0013244 | moricin | 6.174524 | 1.58 × 10−51 |
| BMSK0009812 | gloverin 2 isoform X1 | 4.685764 | 1.64 × 10−35 |
| BMSK0003513 | cecropin A | 3.788939 | 8.94 × 10−26 |
| BMSK0016018 | gloverin 4 precursor | 3.367737 | 2.31 × 10−21 |
| BMSK0003511 | cecropin family | 3.283748 | 6.29 × 10−21 |
| BMSK0016016 | gloverin1 | 3.227077 | 4.27 × 10−20 |
| BMSK0016017 | gloverin-like protein | 2.986507 | 5.72 × 10−15 |
| BMSK0015407 | antibacterial peptide enbocin 2 precursor | 2.910463 | 3.97 × 10−17 |
| BMSK0003627 | attacin-like | 2.88477 | 2.35 × 10−17 |
| BMSK0015405 | antibacterial peptide enbocin 3 precursor | 2.879573 | 7.74 × 10−17 |
| BMSK0005463 | ebocin 3 | 2.729055 | 6.01 × 10−16 |
| BMSK0015969 | gloverin 3 isoform X1 | 2.474034 | 2.23 × 10−13 |
| BMSK0001742 | a pirk homolog | 1.564452 | 6.54 × 10−7 |
| BMSK0006299 | beta-1,3-glucan recognition protein 3 isoform X2 | 1.40262 | 1.33 × 10−5 |
| BMSK0012472 | eukaryotic initiation factor 4E-1 | 1.420455 | 6.20 × 10−5 |
| BMSK0002354 | signal transducing adapter molecule 2 | 1.034003 | 0.000234 |
| BMSK0000175 | epidermal growth factor receptor isoform X2 | −1.20559 | 0.000214 |
| BMSK0003517 | heat shock protein 68 | −4.28148 | 4.89 × 10−34 |
| BMSK0007712 | cAMP-dependent protein kinase catalytic subunit alpha-like | −5.71941 | 1.47 × 10−41 |
| BMSK0007713 | protein kinase domain | −4.55635 | 2.52 × 10−27 |
| BMSK0015669 | heat shock protein 70 | 4.108944 | 1.04 × 10−23 |
| BMSK0015756 | growth arrest and DNA-damage-inducible protein GADD45 alpha | 1.222944 | 0.00032 |
| BMSK0001919 | protein 60A | 1.695163 | 3.1 × 10−7 |
| BMSK0001708 | Tgif2 | −5.366 | 9.01 × 10−45 |